RNA–Protein interactions for RNA: ENST00000341517.8

PDE4B-202, Transcript of phosphodiesterase 4B, humanhuman

TSL 1 (best)

Gene PDE4B, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-202ENST00000341517 ZBTB7CA1YPR0 619 aa13.36□□□□□ -0.27
PDE4B-202ENST00000341517 NEUROD1Q13562 356 aa13.36□□□□□ -0.27
PDE4B-202ENST00000341517 MEGF6O75095 1541 aa13.36□□□□□ -0.27
PDE4B-202ENST00000341517 NSD3Q9BZ95 1437 aa13.35□□□□□ -0.27
PDE4B-202ENST00000341517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDE4B-202ENST00000341517 MAP3K19Q56UN5 1328 aa13.35□□□□□ -0.27
PDE4B-202ENST00000341517 FLT4P35916 1363 aa13.33□□□□□ -0.27
PDE4B-202ENST00000341517 UBR3Q6ZT12 1888 aa13.33□□□□□ -0.27
PDE4B-202ENST00000341517 TMF1P82094 1093 aa13.33□□□□□ -0.28
PDE4B-202ENST00000341517 KIF13BQ9NQT8 1826 aa13.33□□□□□ -0.28
PDE4B-202ENST00000341517 TMC1Q8TDI8 760 aa13.32□□□□□ -0.28
PDE4B-202ENST00000341517 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
PDE4B-202ENST00000341517 ARXQ96QS3 562 aa13.32□□□□□ -0.28
PDE4B-202ENST00000341517 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
PDE4B-202ENST00000341517 ZCRB1Q8TBF4 217 aaKnown RBP13.32□□□□□ -0.28
PDE4B-202ENST00000341517 FLAD1Q8NFF5 587 aa13.31□□□□□ -0.28
PDE4B-202ENST00000341517 USP47Q96K76 1375 aa13.31□□□□□ -0.28
PDE4B-202ENST00000341517 PNPLA7Q6ZV29 1317 aa13.3□□□□□ -0.28
PDE4B-202ENST00000341517 ST20-MTHFSA0A0A6YYL1 179 aa13.3□□□□□ -0.28
PDE4B-202ENST00000341517 ZNF827Q17R98 1081 aa13.3□□□□□ -0.28
PDE4B-202ENST00000341517 LRRC4BQ9NT99 713 aa13.3□□□□□ -0.28
PDE4B-202ENST00000341517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.28
PDE4B-202ENST00000341517 PCDH11XQ9BZA7 1347 aa13.3□□□□□ -0.28
PDE4B-202ENST00000341517 PCDH11YQ9BZA8 1340 aa13.3□□□□□ -0.28
PDE4B-202ENST00000341517 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
PDE4B-202ENST00000341517 FYB1O15117 783 aa13.3□□□□□ -0.28
PDE4B-202ENST00000341517 FHDC1Q9C0D6 1143 aaPredicted RBP13.29□□□□□ -0.28
PDE4B-202ENST00000341517 ZBTB7AO95365 584 aa13.29□□□□□ -0.28
PDE4B-202ENST00000341517 POLD1P28340 1107 aa13.28□□□□□ -0.28
PDE4B-202ENST00000341517 AMPHP49418 695 aa13.28□□□□□ -0.28
PDE4B-202ENST00000341517 PDGFDQ9GZP0 370 aaPredicted RBP13.28□□□□□ -0.28
PDE4B-202ENST00000341517 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.28
PDE4B-202ENST00000341517 SMARCC1Q92922 1105 aaPredicted RBP13.27□□□□□ -0.29
PDE4B-202ENST00000341517 ACSBG1Q96GR2 724 aa13.27□□□□□ -0.29
PDE4B-202ENST00000341517 SOX12O15370 315 aa13.26□□□□□ -0.29
PDE4B-202ENST00000341517 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
PDE4B-202ENST00000341517 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
PDE4B-202ENST00000341517 KIAA1551Q9HCM1 1747 aa13.25□□□□□ -0.29
PDE4B-202ENST00000341517 WASHC2AQ641Q2 1341 aa13.25□□□□□ -0.29
PDE4B-202ENST00000341517 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
PDE4B-202ENST00000341517 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
PDE4B-202ENST00000341517 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
PDE4B-202ENST00000341517 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
PDE4B-202ENST00000341517 CD2APQ9Y5K6 639 aa13.24□□□□□ -0.29
PDE4B-202ENST00000341517 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
PDE4B-202ENST00000341517 ZNF784Q8NCA9 323 aaPredicted RBP13.23□□□□□ -0.29
PDE4B-202ENST00000341517 GRIN3BO60391 1043 aa13.22□□□□□ -0.29
PDE4B-202ENST00000341517 CCNL1Q9UK58 526 aaPredicted RBP13.22□□□□□ -0.29
PDE4B-202ENST00000341517 DDX54Q8TDD1 881 aaKnown RBP13.21□□□□□ -0.29
PDE4B-202ENST00000341517 PALLDQ8WX93 1383 aa13.21□□□□□ -0.3
PDE4B-202ENST00000341517 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.3
PDE4B-202ENST00000341517 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.3
PDE4B-202ENST00000341517 ADCY9O60503 1353 aa13.2□□□□□ -0.3
PDE4B-202ENST00000341517 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
PDE4B-202ENST00000341517 TFCP2L1Q9NZI6 479 aa13.2□□□□□ -0.3
PDE4B-202ENST00000341517 BRCA1P38398 1863 aaKnown RBP13.19□□□□□ -0.3
PDE4B-202ENST00000341517 KDRP35968 1356 aa13.19□□□□□ -0.3
PDE4B-202ENST00000341517 SSFA2P28290 1259 aa13.19□□□□□ -0.3
PDE4B-202ENST00000341517 SCN11AQ9UI33 1791 aa13.19□□□□□ -0.3
PDE4B-202ENST00000341517 CARD14Q9BXL6 1004 aa13.18□□□□□ -0.3
PDE4B-202ENST00000341517 ARFGEF1Q9Y6D6 1849 aa13.18□□□□□ -0.3
PDE4B-202ENST00000341517 COL23A1Q86Y22 540 aaPredicted RBP13.18□□□□□ -0.3
PDE4B-202ENST00000341517 GGNBP2Q9H3C7 697 aa13.18□□□□□ -0.3
PDE4B-202ENST00000341517 CYP27B1O15528 508 aa13.17□□□□□ -0.3
PDE4B-202ENST00000341517 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
PDE4B-202ENST00000341517 RRS1Q15050 365 aaKnown RBP13.16□□□□□ -0.3
PDE4B-202ENST00000341517 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
PDE4B-202ENST00000341517 HSP90AB2PQ58FF8 381 aa13.16□□□□□ -0.3
PDE4B-202ENST00000341517 IGSF1Q8N6C5 1336 aa13.15□□□□□ -0.3
PDE4B-202ENST00000341517 VIRMAQ69YN4 1812 aaKnown RBP13.15□□□□□ -0.3
PDE4B-202ENST00000341517 C1QTNF8P60827 252 aa13.15□□□□□ -0.3
PDE4B-202ENST00000341517 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
PDE4B-202ENST00000341517 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
PDE4B-202ENST00000341517 TJP1Q07157 1748 aa13.15□□□□□ -0.3
PDE4B-202ENST00000341517 MRC1P22897 1456 aa13.15□□□□□ -0.31
PDE4B-202ENST00000341517 ERVV-2B6SEH9 535 aa13.14□□□□□ -0.31
PDE4B-202ENST00000341517 ADRA2BP18089 450 aa13.14□□□□□ -0.31
PDE4B-202ENST00000341517 GPR162Q16538 588 aa13.14□□□□□ -0.31
PDE4B-202ENST00000341517 IFNL2Q8IZJ0 200 aa13.14□□□□□ -0.31
PDE4B-202ENST00000341517 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
PDE4B-202ENST00000341517 NRXN2Q9P2S2 1712 aa13.12□□□□□ -0.31
PDE4B-202ENST00000341517 PHKG2P15735 406 aa13.12□□□□□ -0.31
PDE4B-202ENST00000341517 POLKQ9UBT6 870 aa13.12□□□□□ -0.31
PDE4B-202ENST00000341517 C10orf71Q711Q0 1435 aa13.12□□□□□ -0.31
PDE4B-202ENST00000341517 DLEC1Q9Y238 1755 aa13.12□□□□□ -0.31
PDE4B-202ENST00000341517 PIGBQ92521 554 aa13.12□□□□□ -0.31
PDE4B-202ENST00000341517 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
PDE4B-202ENST00000341517 EYA1Q99502 592 aa13.11□□□□□ -0.31
PDE4B-202ENST00000341517 UBR2Q8IWV8 1755 aa13.11□□□□□ -0.31
PDE4B-202ENST00000341517 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
PDE4B-202ENST00000341517 AK7Q96M32 723 aa13.1□□□□□ -0.31
PDE4B-202ENST00000341517 EMILIN1Q9Y6C2 1016 aa13.1□□□□□ -0.31
PDE4B-202ENST00000341517 LOC102724428A0A0B4J2F2 783 aa13.1□□□□□ -0.31
PDE4B-202ENST00000341517 SIK1P57059 783 aa13.1□□□□□ -0.31
PDE4B-202ENST00000341517 NLGN2Q8NFZ4 835 aa13.1□□□□□ -0.31
PDE4B-202ENST00000341517 FBLN1P23142 703 aa13.09□□□□□ -0.31
PDE4B-202ENST00000341517 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
PDE4B-202ENST00000341517 DCAF5Q96JK2 942 aa13.09□□□□□ -0.31
PDE4B-202ENST00000341517 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
PDE4B-202ENST00000341517 YBX3P16989 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms