RNA–Protein interactions for RNA: ENST00000341369.11

PTMA-201, Transcript of prothymosin alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTMA, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-201ENST00000341369 CARD10Q9BWT7 1032 aa14.52□□□□□ -0.09
PTMA-201ENST00000341369 CHD4Q14839 1912 aa14.52□□□□□ -0.09
PTMA-201ENST00000341369 SLIT3O75094 1523 aa14.51□□□□□ -0.09
PTMA-201ENST00000341369 USP6P35125 1406 aa14.51□□□□□ -0.09
PTMA-201ENST00000341369 MAP3K5Q99683 1374 aa14.51□□□□□ -0.09
PTMA-201ENST00000341369 GIGYF1O75420 1035 aaPredicted RBP14.51□□□□□ -0.09
PTMA-201ENST00000341369 GPR162Q16538 588 aa14.51□□□□□ -0.09
PTMA-201ENST00000341369 KCNH5Q8NCM2 988 aa14.51□□□□□ -0.09
PTMA-201ENST00000341369 CABP2Q9NPB3 220 aa14.51□□□□□ -0.09
PTMA-201ENST00000341369 SCUBE2Q9NQ36 999 aa14.51□□□□□ -0.09
PTMA-201ENST00000341369 AXIN2Q9Y2T1 843 aa14.51□□□□□ -0.09
PTMA-201ENST00000341369 AKAP12Q02952 1782 aa14.51□□□□□ -0.09
PTMA-201ENST00000341369 CABP1Q9NZU7 370 aa14.5□□□□□ -0.09
PTMA-201ENST00000341369 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
PTMA-201ENST00000341369 CPSF1Q10570 1443 aaKnown RBP14.49□□□□□ -0.09
PTMA-201ENST00000341369 ARHGEF25Q86VW2 580 aa14.48□□□□□ -0.09
PTMA-201ENST00000341369 WNK3Q9BYP7 1800 aa14.48□□□□□ -0.09
PTMA-201ENST00000341369 CCDC7Q96M83 1385 aa14.47□□□□□ -0.09
PTMA-201ENST00000341369 KIAA1210Q9ULL0 1709 aa14.47□□□□□ -0.09
PTMA-201ENST00000341369 COL18A1P39060 1754 aa14.47□□□□□ -0.09
PTMA-201ENST00000341369 POLD1P28340 1107 aa14.45□□□□□ -0.1
PTMA-201ENST00000341369 NBPF1Q3BBV0 1214 aa14.45□□□□□ -0.1
PTMA-201ENST00000341369 TNS2Q63HR2 1409 aa14.45□□□□□ -0.1
PTMA-201ENST00000341369 SOX12O15370 315 aa14.44□□□□□ -0.1
PTMA-201ENST00000341369 SLC16A10Q8TF71 515 aa14.44□□□□□ -0.1
PTMA-201ENST00000341369 PIK3C2AO00443 1686 aa14.43□□□□□ -0.1
PTMA-201ENST00000341369 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
PTMA-201ENST00000341369 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
PTMA-201ENST00000341369 ACSBG1Q96GR2 724 aa14.43□□□□□ -0.1
PTMA-201ENST00000341369 NHSQ6T4R5 1651 aa14.42□□□□□ -0.1
PTMA-201ENST00000341369 QRICH2Q9H0J4 1663 aa14.42□□□□□ -0.1
PTMA-201ENST00000341369 TTC21BQ7Z4L5 1316 aa14.41□□□□□ -0.1
PTMA-201ENST00000341369 EVC2Q86UK5 1308 aa14.41□□□□□ -0.1
PTMA-201ENST00000341369 TTC21AQ8NDW8 1320 aa14.41□□□□□ -0.1
PTMA-201ENST00000341369 TRPM1Q7Z4N2 1603 aa14.41□□□□□ -0.1
PTMA-201ENST00000341369 PAPPAQ13219 1627 aa14.41□□□□□ -0.1
PTMA-201ENST00000341369 ABCC6O95255 1503 aa14.41□□□□□ -0.1
PTMA-201ENST00000341369 IL2RBP14784 551 aa14.4□□□□□ -0.1
PTMA-201ENST00000341369 ZNF827Q17R98 1081 aa14.4□□□□□ -0.1
PTMA-201ENST00000341369 SLC27A3Q5K4L6 730 aa14.4□□□□□ -0.1
PTMA-201ENST00000341369 CEP350Q5VT06 3117 aa14.39□□□□□ -0.11
PTMA-201ENST00000341369 GRIN3BO60391 1043 aa14.39□□□□□ -0.11
PTMA-201ENST00000341369 ATN1P54259 1190 aaPredicted RBP14.39□□□□□ -0.11
PTMA-201ENST00000341369 NLRP2Q9NX02 1062 aa14.39□□□□□ -0.11
PTMA-201ENST00000341369 RGPD5Q99666 1765 aa14.39□□□□□ -0.11
PTMA-201ENST00000341369 LRRC4BQ9NT99 713 aa14.38□□□□□ -0.11
PTMA-201ENST00000341369 TFCP2L1Q9NZI6 479 aa14.37□□□□□ -0.11
PTMA-201ENST00000341369 ERBB3P21860 1342 aa14.37□□□□□ -0.11
PTMA-201ENST00000341369 GOLGB1Q14789 3259 aaKnown RBP14.37□□□□□ -0.11
PTMA-201ENST00000341369 NFAT5O94916 1531 aa14.36□□□□□ -0.11
PTMA-201ENST00000341369 BTAF1O14981 1849 aa14.36□□□□□ -0.11
PTMA-201ENST00000341369 KTN1Q86UP2 1357 aaKnown RBP14.35□□□□□ -0.11
PTMA-201ENST00000341369 PNPLA7Q6ZV29 1317 aa14.35□□□□□ -0.11
PTMA-201ENST00000341369 NLGN2Q8NFZ4 835 aa14.34□□□□□ -0.11
PTMA-201ENST00000341369 QSER1Q2KHR3 1735 aa14.33□□□□□ -0.12
PTMA-201ENST00000341369 SHANK3Q9BYB0 1731 aa14.33□□□□□ -0.12
PTMA-201ENST00000341369 DDX54Q8TDD1 881 aaKnown RBP14.32□□□□□ -0.12
PTMA-201ENST00000341369 ANKRD24Q8TF21 1146 aa14.32□□□□□ -0.12
PTMA-201ENST00000341369 POTEFA5A3E0 1075 aa14.31□□□□□ -0.12
PTMA-201ENST00000341369 YBX3P16989 372 aaKnown RBP eCLIP14.31□□□□□ -0.123e-7■□□□□ 8.5
PTMA-201ENST00000341369 SYTL4Q96C24 671 aaPredicted RBP14.31□□□□□ -0.12
PTMA-201ENST00000341369 GPBP1L1Q9HC44 474 aaPredicted RBP14.31□□□□□ -0.12
PTMA-201ENST00000341369 COL24A1Q17RW2 1714 aa14.31□□□□□ -0.12
PTMA-201ENST00000341369 USP31Q70CQ4 1352 aa14.31□□□□□ -0.12
PTMA-201ENST00000341369 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.3□□□□□ -0.12
PTMA-201ENST00000341369 TSPYL2Q9H2G4 693 aaPredicted RBP14.3□□□□□ -0.12
PTMA-201ENST00000341369 ATP10DQ9P241 1426 aa14.3□□□□□ -0.12
PTMA-201ENST00000341369 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
PTMA-201ENST00000341369 HSPA6P17066 643 aa14.28□□□□□ -0.12
PTMA-201ENST00000341369 HMGB2P26583 209 aaKnown RBP14.28□□□□□ -0.12
PTMA-201ENST00000341369 PRIM1P49642 420 aaKnown RBP14.28□□□□□ -0.12
PTMA-201ENST00000341369 CDAN1Q8IWY9 1227 aa14.28□□□□□ -0.12
PTMA-201ENST00000341369 ANKRD36BQ8N2N9 1353 aa14.28□□□□□ -0.12
PTMA-201ENST00000341369 KCNQ4P56696 695 aa14.27□□□□□ -0.13
PTMA-201ENST00000341369 NME9Q86XW9 330 aa14.27□□□□□ -0.13
PTMA-201ENST00000341369 BMP2KQ9NSY1 1161 aaPredicted RBP14.27□□□□□ -0.13
PTMA-201ENST00000341369 CCNL1Q9UK58 526 aaPredicted RBP14.27□□□□□ -0.13
PTMA-201ENST00000341369 CD2APQ9Y5K6 639 aa14.27□□□□□ -0.13
PTMA-201ENST00000341369 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
PTMA-201ENST00000341369 LTN1O94822 1766 aa14.25□□□□□ -0.13
PTMA-201ENST00000341369 MON2Q7Z3U7 1717 aa14.25□□□□□ -0.13
PTMA-201ENST00000341369 HDGFL2Q7Z4V5 671 aaPredicted RBP14.25□□□□□ -0.13
PTMA-201ENST00000341369 ROCK2O75116 1388 aaKnown RBP14.24□□□□□ -0.13
PTMA-201ENST00000341369 USP47Q96K76 1375 aa14.24□□□□□ -0.13
PTMA-201ENST00000341369 COL23A1Q86Y22 540 aaPredicted RBP14.24□□□□□ -0.13
PTMA-201ENST00000341369 FLAD1Q8NFF5 587 aa14.24□□□□□ -0.13
PTMA-201ENST00000341369 IP6K1Q92551 441 aa14.24□□□□□ -0.13
PTMA-201ENST00000341369 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
PTMA-201ENST00000341369 USP54Q70EL1 1684 aa14.23□□□□□ -0.13
PTMA-201ENST00000341369 TMC1Q8TDI8 760 aa14.23□□□□□ -0.13
PTMA-201ENST00000341369 ZNF526Q8TF50 670 aaPredicted RBP14.23□□□□□ -0.13
PTMA-201ENST00000341369 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
PTMA-201ENST00000341369 SBNO2Q9Y2G9 1366 aa14.22□□□□□ -0.13
PTMA-201ENST00000341369 TUBGCP6Q96RT7 1819 aa14.22□□□□□ -0.13
PTMA-201ENST00000341369 LY75O60449 1722 aa14.22□□□□□ -0.13
PTMA-201ENST00000341369 MSL1Q68DK7 614 aa14.22□□□□□ -0.13
PTMA-201ENST00000341369 ZCRB1Q8TBF4 217 aaKnown RBP14.22□□□□□ -0.13
PTMA-201ENST00000341369 TERF2IPQ9NYB0 399 aa14.22□□□□□ -0.13
PTMA-201ENST00000341369 FAM208AQ9UK61 1670 aaKnown RBP14.21□□□□□ -0.13
PTMA-201ENST00000341369 TIE1P35590 1138 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms