RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 FCHSD2O94868 740 aa17.22■□□□□ 0.35
TRIM60-201ENST00000341062 PANK1Q8TE04 598 aa17.22■□□□□ 0.35
TRIM60-201ENST00000341062 SKAP1Q86WV1 359 aa17.22■□□□□ 0.35
TRIM60-201ENST00000341062 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
TRIM60-201ENST00000341062 ZBTB47Q9UFB7 747 aaPredicted RBP17.22■□□□□ 0.35
TRIM60-201ENST00000341062 PLCH1Q4KWH8 1693 aa17.22■□□□□ 0.35
TRIM60-201ENST00000341062 RGPD1P0DJD0 1748 aa17.21■□□□□ 0.35
TRIM60-201ENST00000341062 COG6Q9Y2V7 657 aa17.21■□□□□ 0.35
TRIM60-201ENST00000341062 AEBP1Q8IUX7 1158 aa17.2■□□□□ 0.34
TRIM60-201ENST00000341062 FAM161AQ3B820 660 aa17.19■□□□□ 0.34
TRIM60-201ENST00000341062 ANKRD24Q8TF21 1146 aa17.19■□□□□ 0.34
TRIM60-201ENST00000341062 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
TRIM60-201ENST00000341062 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
TRIM60-201ENST00000341062 COL14A1Q05707 1796 aaKnown RBP17.18■□□□□ 0.34
TRIM60-201ENST00000341062 IGHDP01880 384 aa17.18■□□□□ 0.34
TRIM60-201ENST00000341062 HMOX1P09601 288 aa17.18■□□□□ 0.34
TRIM60-201ENST00000341062 BTG4Q9NY30 223 aa17.18■□□□□ 0.34
TRIM60-201ENST00000341062 NBPF6Q5VWK0 638 aa17.18■□□□□ 0.34
TRIM60-201ENST00000341062 NBPF4Q96M43 638 aa17.18■□□□□ 0.34
TRIM60-201ENST00000341062 EYA1Q99502 592 aa17.18■□□□□ 0.34
TRIM60-201ENST00000341062 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
TRIM60-201ENST00000341062 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
TRIM60-201ENST00000341062 RIPK4P57078 832 aa17.17■□□□□ 0.34
TRIM60-201ENST00000341062 C8orf37Q96NL8 207 aa17.17■□□□□ 0.34
TRIM60-201ENST00000341062 ERBB3P21860 1342 aa17.17■□□□□ 0.34
TRIM60-201ENST00000341062 NRAPQ86VF7 1730 aa17.17■□□□□ 0.34
TRIM60-201ENST00000341062 RLBP1P12271 317 aa17.16■□□□□ 0.34
TRIM60-201ENST00000341062 C8orf34Q49A92 452 aa17.16■□□□□ 0.34
TRIM60-201ENST00000341062 STRN4Q9NRL3 753 aa17.16■□□□□ 0.34
TRIM60-201ENST00000341062 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
TRIM60-201ENST00000341062 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
TRIM60-201ENST00000341062 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
TRIM60-201ENST00000341062 SPATA31A6Q5VVP1 1343 aa17.15■□□□□ 0.34
TRIM60-201ENST00000341062 NPM2Q86SE8 214 aaKnown RBP17.15■□□□□ 0.34
TRIM60-201ENST00000341062 TSR2Q969E8 191 aaKnown RBP17.15■□□□□ 0.34
TRIM60-201ENST00000341062 DLG5Q8TDM6 1919 aa17.15■□□□□ 0.34
TRIM60-201ENST00000341062 FAM208AQ9UK61 1670 aaKnown RBP17.14■□□□□ 0.33
TRIM60-201ENST00000341062 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
TRIM60-201ENST00000341062 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.33
TRIM60-201ENST00000341062 DDRGK1Q96HY6 314 aa17.14■□□□□ 0.33
TRIM60-201ENST00000341062 BCL2L13Q9BXK5 485 aa17.14■□□□□ 0.33
TRIM60-201ENST00000341062 SLIT2O94813 1529 aa17.14■□□□□ 0.33
TRIM60-201ENST00000341062 NEFMP07197 916 aa17.13■□□□□ 0.33
TRIM60-201ENST00000341062 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
TRIM60-201ENST00000341062 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
TRIM60-201ENST00000341062 SULT6B1Q6IMI4 303 aa17.12■□□□□ 0.33
TRIM60-201ENST00000341062 ILDR1Q86SU0 546 aaPredicted RBP17.12■□□□□ 0.33
TRIM60-201ENST00000341062 ABCC6O95255 1503 aa17.12■□□□□ 0.33
TRIM60-201ENST00000341062 IGSF1Q8N6C5 1336 aa17.12■□□□□ 0.33
TRIM60-201ENST00000341062 RGS3P49796 1198 aa17.12■□□□□ 0.33
TRIM60-201ENST00000341062 DZIP1LQ8IYY4 767 aaKnown RBP17.12■□□□□ 0.33
TRIM60-201ENST00000341062 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
TRIM60-201ENST00000341062 TNNQ9UQP3 1299 aa17.12■□□□□ 0.33
TRIM60-201ENST00000341062 NFE2L2Q16236 605 aa17.11■□□□□ 0.33
TRIM60-201ENST00000341062 NGLY1Q96IV0 654 aa17.11■□□□□ 0.33
TRIM60-201ENST00000341062 PHACTR3Q96KR7 559 aa17.11■□□□□ 0.33
TRIM60-201ENST00000341062 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
TRIM60-201ENST00000341062 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
TRIM60-201ENST00000341062 PCDHB15Q9Y5E8 787 aa17.11■□□□□ 0.33
TRIM60-201ENST00000341062 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
TRIM60-201ENST00000341062 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
TRIM60-201ENST00000341062 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
TRIM60-201ENST00000341062 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
TRIM60-201ENST00000341062 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
TRIM60-201ENST00000341062 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
TRIM60-201ENST00000341062 ALDH1L2Q3SY69 923 aa17.1■□□□□ 0.33
TRIM60-201ENST00000341062 EP400Q96L91 3159 aa17.09■□□□□ 0.33
TRIM60-201ENST00000341062 KIF16BQ96L93 1317 aa17.09■□□□□ 0.33
TRIM60-201ENST00000341062 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
TRIM60-201ENST00000341062 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
TRIM60-201ENST00000341062 TRIM27P14373 513 aa17.08■□□□□ 0.33
TRIM60-201ENST00000341062 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.33
TRIM60-201ENST00000341062 RWDD1Q9H446 243 aaPredicted RBP17.08■□□□□ 0.33
TRIM60-201ENST00000341062 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
TRIM60-201ENST00000341062 AFF2P51816 1311 aa17.08■□□□□ 0.32
TRIM60-201ENST00000341062 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
TRIM60-201ENST00000341062 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
TRIM60-201ENST00000341062 MEGF6O75095 1541 aa17.07■□□□□ 0.32
TRIM60-201ENST00000341062 KDRP35968 1356 aa17.07■□□□□ 0.32
TRIM60-201ENST00000341062 EVA1CP58658 441 aa17.07■□□□□ 0.32
TRIM60-201ENST00000341062 FNBP4Q8N3X1 1017 aaPredicted RBP17.07■□□□□ 0.32
TRIM60-201ENST00000341062 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
TRIM60-201ENST00000341062 IPO8O15397 1037 aaKnown RBP17.05■□□□□ 0.32
TRIM60-201ENST00000341062 LMOD3Q0VAK6 560 aa17.05■□□□□ 0.32
TRIM60-201ENST00000341062 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
TRIM60-201ENST00000341062 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
TRIM60-201ENST00000341062 UNC5CLQ8IV45 518 aa17.04■□□□□ 0.32
TRIM60-201ENST00000341062 USP21Q9UK80 565 aa17.04■□□□□ 0.32
TRIM60-201ENST00000341062 CRB1P82279 1406 aa17.04■□□□□ 0.32
TRIM60-201ENST00000341062 GNAI1P63096 354 aa17.03■□□□□ 0.32
TRIM60-201ENST00000341062 HDAC1Q13547 482 aaPredicted RBP17.03■□□□□ 0.32
TRIM60-201ENST00000341062 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
TRIM60-201ENST00000341062 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.02■□□□□ 0.32
TRIM60-201ENST00000341062 WNK3Q9BYP7 1800 aa17.02■□□□□ 0.32
TRIM60-201ENST00000341062 CARD10Q9BWT7 1032 aa17.02■□□□□ 0.32
TRIM60-201ENST00000341062 SHANK3Q9BYB0 1731 aa17.02■□□□□ 0.31
TRIM60-201ENST00000341062 GLI3P10071 1580 aa17.02■□□□□ 0.31
TRIM60-201ENST00000341062 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
TRIM60-201ENST00000341062 PDZRN3Q9UPQ7 1066 aa17.01■□□□□ 0.31
TRIM60-201ENST00000341062 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms