RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 DNTTIP2Q5QJE6 756 aaKnown RBP9.28□□□□□ -0.92
HIPK1-201ENST00000340480 C19orf44Q9H6X5 657 aa9.28□□□□□ -0.92
HIPK1-201ENST00000340480 RIC3Q7Z5B4 369 aa9.27□□□□□ -0.92
HIPK1-201ENST00000340480 ARHGEF40Q8TER5 1519 aa9.27□□□□□ -0.93
HIPK1-201ENST00000340480 ARHGEF10O15013 1369 aa9.27□□□□□ -0.93
HIPK1-201ENST00000340480 ATP6V1DQ9Y5K8 247 aa9.27□□□□□ -0.93
HIPK1-201ENST00000340480 IQGAP1P46940 1657 aa9.27□□□□□ -0.93
HIPK1-201ENST00000340480 ZKSCAN1P17029 563 aaPredicted RBP9.27□□□□□ -0.93
HIPK1-201ENST00000340480 PRDM11Q9NQV5 511 aa9.27□□□□□ -0.93
HIPK1-201ENST00000340480 DEKP35659 375 aaKnown RBP9.27□□□□□ -0.93
HIPK1-201ENST00000340480 ANKARQ7Z5J8 1434 aa9.27□□□□□ -0.93
HIPK1-201ENST00000340480 NEXMIFQ5QGS0 1516 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 NUCB2P80303 420 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 RNF20Q5VTR2 975 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 MSH6P52701 1360 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 MCM10Q7L590 875 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 LRRCC1Q9C099 1032 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 METP08581 1390 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 RIMBP3CA6NJZ7 1639 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 RIMBP3BA6NNM3 1639 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 RIMBP3Q9UFD9 1639 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 THUMPD2Q9BTF0 503 aaKnown RBP9.26□□□□□ -0.93
HIPK1-201ENST00000340480 ALKQ9UM73 1620 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 CDK12Q9NYV4 1490 aaPredicted RBP9.26□□□□□ -0.93
HIPK1-201ENST00000340480 HSP90AB2PQ58FF8 381 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 KRT28Q7Z3Y7 464 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 ANO8Q9HCE9 1232 aaPredicted RBP9.26□□□□□ -0.93
HIPK1-201ENST00000340480 BTBD11A6QL63 1104 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 RILPL2Q969X0 211 aa9.26□□□□□ -0.93
HIPK1-201ENST00000340480 RAB11FIP3O75154 756 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 DIP2BQ9P265 1576 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 MAP3K19Q56UN5 1328 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 MSH5O43196 834 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 HOXB7P09629 217 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 CHMP3Q9Y3E7 222 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 CTDP1Q9Y5B0 961 aaPredicted RBP9.25□□□□□ -0.93
HIPK1-201ENST00000340480 REREQ9P2R6 1566 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 KIAA0232Q92628 1395 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 CNTROBQ8N137 903 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 PHF23Q9BUL5 403 aaPredicted RBP9.25□□□□□ -0.93
HIPK1-201ENST00000340480 CIZ1Q9ULV3 898 aaPredicted RBP9.25□□□□□ -0.93
HIPK1-201ENST00000340480 FOXO3O43524 673 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 BMP2KLQ5H9B9 411 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 DBF4Q9UBU7 674 aaPredicted RBP9.25□□□□□ -0.93
HIPK1-201ENST00000340480 RTL1A6NKG5 1358 aa9.25□□□□□ -0.93
HIPK1-201ENST00000340480 CFAP65Q6ZU64 1925 aaKnown RBP9.25□□□□□ -0.93
HIPK1-201ENST00000340480 SURF6O75683 361 aaKnown RBP9.25□□□□□ -0.93
HIPK1-201ENST00000340480 MRPL50Q8N5N7 158 aaKnown RBP9.24□□□□□ -0.93
HIPK1-201ENST00000340480 CWC22Q9HCG8 908 aaKnown RBP9.24□□□□□ -0.93
HIPK1-201ENST00000340480 VAMP4O75379 141 aa9.24□□□□□ -0.93
HIPK1-201ENST00000340480 LTKP29376 864 aa9.24□□□□□ -0.93
HIPK1-201ENST00000340480 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
HIPK1-201ENST00000340480 IP6K1Q92551 441 aa9.24□□□□□ -0.93
HIPK1-201ENST00000340480 NECTIN2Q92692 538 aa9.24□□□□□ -0.93
HIPK1-201ENST00000340480 MAP3K5Q99683 1374 aa9.24□□□□□ -0.93
HIPK1-201ENST00000340480 FRAT2O75474 233 aaPredicted RBP9.23□□□□□ -0.93
HIPK1-201ENST00000340480 HYPKQ9NX55 129 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 CABP4P57796 275 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 FLIIQ13045 1269 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 PLCB2Q00722 1185 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 FRMPD1Q5SYB0 1578 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 SMC5Q8IY18 1101 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 CEP89Q96ST8 783 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 ANO2Q9NQ90 1003 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 USP6P35125 1406 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 HMGB2P26583 209 aaKnown RBP9.23□□□□□ -0.93
HIPK1-201ENST00000340480 LARP1Q6PKG0 1096 aaKnown RBP9.23□□□□□ -0.93
HIPK1-201ENST00000340480 TOM1L2Q6ZVM7 507 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 TRIM35Q9UPQ4 493 aa9.23□□□□□ -0.93
HIPK1-201ENST00000340480 ADGRB1O14514 1584 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 BRPF1P55201 1214 aaPredicted RBP9.22□□□□□ -0.93
HIPK1-201ENST00000340480 QRICH2Q9H0J4 1663 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 DCTN1Q14203 1278 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 SPATA31D1Q6ZQQ2 1576 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 PHF14O94880 888 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 PDIA4P13667 645 aaKnown RBP9.22□□□□□ -0.93
HIPK1-201ENST00000340480 TRIM34Q9BYJ4 488 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 MROH1Q8NDA8 1641 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 HOXC9P31274 260 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 IFNL2Q8IZJ0 200 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 TSPOAP1O95153 1857 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 KDM2BQ8NHM5 1336 aa9.22□□□□□ -0.93
HIPK1-201ENST00000340480 CHL1O00533 1208 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 KIF1BPQ96EK5 621 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 C1orf115Q9H7X2 142 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 GOLGA6L3A6NEY3 463 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 MARCH6O60337 910 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 ANKRD24Q8TF21 1146 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 NOC3LQ8WTT2 800 aaKnown RBP9.21□□□□□ -0.93
HIPK1-201ENST00000340480 DNAAF4Q8WXU2 420 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 ROBO2Q9HCK4 1378 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 TECPR2O15040 1411 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 PHACTR3Q96KR7 559 aa9.21□□□□□ -0.93
HIPK1-201ENST00000340480 ANKRD44Q8N8A2 993 aa9.21□□□□□ -0.94
HIPK1-201ENST00000340480 EYA1Q99502 592 aa9.21□□□□□ -0.94
HIPK1-201ENST00000340480 SPINK5Q9NQ38 1064 aaPredicted RBP9.21□□□□□ -0.94
HIPK1-201ENST00000340480 NOL10Q9BSC4 688 aaKnown RBP9.21□□□□□ -0.94
HIPK1-201ENST00000340480 ZBTB40Q9NUA8 1239 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms