RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 UBR2Q8IWV8 1755 aa9.33□□□□□ -0.92
NUP43-201ENST00000340413 SLIT2O94813 1529 aa9.33□□□□□ -0.92
NUP43-201ENST00000340413 SULT6B1Q6IMI4 303 aa9.33□□□□□ -0.92
NUP43-201ENST00000340413 HSP90AB1P08238 724 aaKnown RBP9.32□□□□□ -0.92
NUP43-201ENST00000340413 HOXB7P09629 217 aa9.32□□□□□ -0.92
NUP43-201ENST00000340413 AKAP4Q5JQC9 854 aa9.32□□□□□ -0.92
NUP43-201ENST00000340413 CCDC146Q8IYE0 955 aa9.32□□□□□ -0.92
NUP43-201ENST00000340413 CARD10Q9BWT7 1032 aa9.32□□□□□ -0.92
NUP43-201ENST00000340413 THRAP3Q9Y2W1 955 aaKnown RBP9.32□□□□□ -0.92
NUP43-201ENST00000340413 CNGB1Q14028 1251 aaPredicted RBP9.32□□□□□ -0.92
NUP43-201ENST00000340413 RBM33Q96EV2 1170 aaKnown RBP9.32□□□□□ -0.92
NUP43-201ENST00000340413 CERKQ8TCT0 537 aa9.31□□□□□ -0.92
NUP43-201ENST00000340413 GNAT3A8MTJ3 354 aa9.31□□□□□ -0.92
NUP43-201ENST00000340413 RRP1P56182 461 aaKnown RBP9.31□□□□□ -0.92
NUP43-201ENST00000340413 PDE3AQ14432 1141 aa9.31□□□□□ -0.92
NUP43-201ENST00000340413 CHL1O00533 1208 aa9.3□□□□□ -0.92
NUP43-201ENST00000340413 PPM1GO15355 546 aaPredicted RBP9.3□□□□□ -0.92
NUP43-201ENST00000340413 ARHGAP45Q92619 1136 aa9.3□□□□□ -0.92
NUP43-201ENST00000340413 SPG7Q9UQ90 795 aa9.3□□□□□ -0.92
NUP43-201ENST00000340413 FANCIQ9NVI1 1328 aa9.3□□□□□ -0.92
NUP43-201ENST00000340413 PXDNLA1KZ92 1463 aa9.3□□□□□ -0.92
NUP43-201ENST00000340413 THSD7AQ9UPZ6 1657 aa9.29□□□□□ -0.92
NUP43-201ENST00000340413 NKX1-1Q15270 411 aaPredicted RBP9.29□□□□□ -0.92
NUP43-201ENST00000340413 PHACTR3Q96KR7 559 aa9.29□□□□□ -0.92
NUP43-201ENST00000340413 CHMP4BQ9H444 224 aaKnown RBP9.29□□□□□ -0.92
NUP43-201ENST00000340413 BCL9O00512 1426 aa9.29□□□□□ -0.92
NUP43-201ENST00000340413 KIF16BQ96L93 1317 aa9.29□□□□□ -0.92
NUP43-201ENST00000340413 TATP17735 454 aaPredicted RBP9.29□□□□□ -0.92
NUP43-201ENST00000340413 NBPF6Q5VWK0 638 aa9.29□□□□□ -0.92
NUP43-201ENST00000340413 NBPF4Q96M43 638 aa9.29□□□□□ -0.92
NUP43-201ENST00000340413 RTF1Q92541 710 aaKnown RBP9.28□□□□□ -0.92
NUP43-201ENST00000340413 MEGF6O75095 1541 aa9.28□□□□□ -0.92
NUP43-201ENST00000340413 MTHFSDQ2M296 383 aaKnown RBP9.28□□□□□ -0.92
NUP43-201ENST00000340413 TNS2Q63HR2 1409 aa9.27□□□□□ -0.92
NUP43-201ENST00000340413 HMOX1P09601 288 aa9.27□□□□□ -0.93
NUP43-201ENST00000340413 HEG1Q9ULI3 1381 aa9.27□□□□□ -0.93
NUP43-201ENST00000340413 PCDH11XQ9BZA7 1347 aa9.27□□□□□ -0.93
NUP43-201ENST00000340413 PCDH11YQ9BZA8 1340 aa9.27□□□□□ -0.93
NUP43-201ENST00000340413 AEBP1Q8IUX7 1158 aa9.27□□□□□ -0.93
NUP43-201ENST00000340413 PRDM11Q9NQV5 511 aa9.27□□□□□ -0.93
NUP43-201ENST00000340413 CDCA7LQ96GN5 454 aa9.26□□□□□ -0.93
NUP43-201ENST00000340413 FBLN1P23142 703 aa9.26□□□□□ -0.93
NUP43-201ENST00000340413 NUTM2GQ5VZR2 741 aa9.26□□□□□ -0.93
NUP43-201ENST00000340413 RAPGEF4Q8WZA2 1011 aa9.26□□□□□ -0.93
NUP43-201ENST00000340413 GLI3P10071 1580 aa9.26□□□□□ -0.93
NUP43-201ENST00000340413 RREB1Q92766 1687 aa9.26□□□□□ -0.93
NUP43-201ENST00000340413 RARSP54136 660 aaKnown RBP9.26□□□□□ -0.93
NUP43-201ENST00000340413 BARGINQ6ZT62 677 aa9.26□□□□□ -0.93
NUP43-201ENST00000340413 AXIN2Q9Y2T1 843 aa9.26□□□□□ -0.93
NUP43-201ENST00000340413 IPO8O15397 1037 aaKnown RBP9.25□□□□□ -0.93
NUP43-201ENST00000340413 XPCQ01831 940 aaPredicted RBP9.25□□□□□ -0.93
NUP43-201ENST00000340413 PPP4R2Q9NY27 417 aa9.25□□□□□ -0.93
NUP43-201ENST00000340413 RGS12O14924 1447 aa9.25□□□□□ -0.93
NUP43-201ENST00000340413 TAF7Q15545 349 aaPredicted RBP9.25□□□□□ -0.93
NUP43-201ENST00000340413 TOGARAM1Q9Y4F4 1720 aa9.25□□□□□ -0.93
NUP43-201ENST00000340413 C1orf141Q5JVX7 400 aa9.25□□□□□ -0.93
NUP43-201ENST00000340413 IFNL2Q8IZJ0 200 aa9.25□□□□□ -0.93
NUP43-201ENST00000340413 ERVV-2B6SEH9 535 aa9.24□□□□□ -0.93
NUP43-201ENST00000340413 DCAF5Q96JK2 942 aa9.24□□□□□ -0.93
NUP43-201ENST00000340413 SUPT16HQ9Y5B9 1047 aaKnown RBP9.24□□□□□ -0.93
NUP43-201ENST00000340413 PTPRCP08575 1304 aa9.24□□□□□ -0.93
NUP43-201ENST00000340413 GTF3C3Q9Y5Q9 886 aa9.24□□□□□ -0.93
NUP43-201ENST00000340413 RNMTO43148 476 aaKnown RBP9.24□□□□□ -0.93
NUP43-201ENST00000340413 SPINK5Q9NQ38 1064 aaPredicted RBP9.24□□□□□ -0.93
NUP43-201ENST00000340413 ERBB4Q15303 1308 aa9.24□□□□□ -0.93
NUP43-201ENST00000340413 IL2RBP14784 551 aa9.23□□□□□ -0.93
NUP43-201ENST00000340413 LMOD2Q6P5Q4 547 aa9.23□□□□□ -0.93
NUP43-201ENST00000340413 MBIPQ9NS73 344 aa9.23□□□□□ -0.93
NUP43-201ENST00000340413 KDM6AO15550 1401 aaPredicted RBP9.23□□□□□ -0.93
NUP43-201ENST00000340413 PHKG2P15735 406 aa9.23□□□□□ -0.93
NUP43-201ENST00000340413 UBAP1LF5GYI3 381 aa9.23□□□□□ -0.93
NUP43-201ENST00000340413 ZNF530Q6P9A1 599 aaPredicted RBP9.22□□□□□ -0.93
NUP43-201ENST00000340413 FNBP4Q8N3X1 1017 aaPredicted RBP9.22□□□□□ -0.93
NUP43-201ENST00000340413 ITGB4P16144 1822 aa9.22□□□□□ -0.93
NUP43-201ENST00000340413 VAMP4O75379 141 aa9.22□□□□□ -0.93
NUP43-201ENST00000340413 ZC3H6P61129 1189 aaKnown RBP9.22□□□□□ -0.93
NUP43-201ENST00000340413 DDX17Q92841 729 aaKnown RBP9.22□□□□□ -0.93
NUP43-201ENST00000340413 RRP7AQ9Y3A4 280 aaKnown RBP9.22□□□□□ -0.93
NUP43-201ENST00000340413 NHSQ6T4R5 1651 aa9.22□□□□□ -0.93
NUP43-201ENST00000340413 FAM83GA6ND36 823 aa9.22□□□□□ -0.93
NUP43-201ENST00000340413 HMGB2P26583 209 aaKnown RBP9.22□□□□□ -0.93
NUP43-201ENST00000340413 PELP1Q8IZL8 1130 aaKnown RBP9.21□□□□□ -0.93
NUP43-201ENST00000340413 API5Q9BZZ5 524 aaKnown RBP9.21□□□□□ -0.93
NUP43-201ENST00000340413 ATRNO75882 1429 aa9.21□□□□□ -0.93
NUP43-201ENST00000340413 EXOSC9Q06265 439 aaKnown RBP9.21□□□□□ -0.94
NUP43-201ENST00000340413 VPS72Q15906 364 aa9.21□□□□□ -0.94
NUP43-201ENST00000340413 SPATA31A5Q5VU36 1347 aa9.21□□□□□ -0.94
NUP43-201ENST00000340413 SPATA31A7Q8IWB4 1347 aa9.21□□□□□ -0.94
NUP43-201ENST00000340413 C5P01031 1676 aa9.21□□□□□ -0.94
NUP43-201ENST00000340413 ZKSCAN2Q63HK3 967 aa9.21□□□□□ -0.94
NUP43-201ENST00000340413 KCPQ6ZWJ8 1503 aa9.2□□□□□ -0.94
NUP43-201ENST00000340413 SPATA31A1Q5TZJ5 1347 aa9.2□□□□□ -0.94
NUP43-201ENST00000340413 IL17REQ8NFR9 667 aa9.2□□□□□ -0.94
NUP43-201ENST00000340413 NLRP2Q9NX02 1062 aa9.2□□□□□ -0.94
NUP43-201ENST00000340413 CSB-PGBD3P0DP91 1061 aa9.2□□□□□ -0.94
NUP43-201ENST00000340413 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
NUP43-201ENST00000340413 ZCRB1Q8TBF4 217 aaKnown RBP9.2□□□□□ -0.94
NUP43-201ENST00000340413 RGPD3A6NKT7 1758 aaPredicted RBP9.2□□□□□ -0.94
NUP43-201ENST00000340413 RGPD4Q7Z3J3 1758 aa9.2□□□□□ -0.94
NUP43-201ENST00000340413 DOT1LQ8TEK3 1739 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms