RNA–Protein interactions for RNA: ENST00000339677.10

POLDIP3-202, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene POLDIP3, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-202ENST00000339677 LTN1O94822 1766 aa21.42■■□□□ 1.02
POLDIP3-202ENST00000339677 USP54Q70EL1 1684 aa21.42■■□□□ 1.02
POLDIP3-202ENST00000339677 TONSLQ96HA7 1378 aa21.42■■□□□ 1.02
POLDIP3-202ENST00000339677 MAP3K5Q99683 1374 aa21.42■■□□□ 1.02
POLDIP3-202ENST00000339677 POLD1P28340 1107 aa21.41■■□□□ 1.02
POLDIP3-202ENST00000339677 NBPF6Q5VWK0 638 aa21.41■■□□□ 1.02
POLDIP3-202ENST00000339677 NBPF4Q96M43 638 aa21.41■■□□□ 1.02
POLDIP3-202ENST00000339677 ANKRD36BQ8N2N9 1353 aa21.4■■□□□ 1.02
POLDIP3-202ENST00000339677 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
POLDIP3-202ENST00000339677 PELP1Q8IZL8 1130 aaKnown RBP21.38■■□□□ 1.01
POLDIP3-202ENST00000339677 USHBP1Q8N6Y0 703 aa21.38■■□□□ 1.01
POLDIP3-202ENST00000339677 NSD2O96028 1365 aa21.37■■□□□ 1.01
POLDIP3-202ENST00000339677 FYB1O15117 783 aa21.37■■□□□ 1.01
POLDIP3-202ENST00000339677 NLGN2Q8NFZ4 835 aa21.37■■□□□ 1.01
POLDIP3-202ENST00000339677 GGNBP2Q9H3C7 697 aa21.37■■□□□ 1.01
POLDIP3-202ENST00000339677 CCNL1Q9UK58 526 aaPredicted RBP21.37■■□□□ 1.01
POLDIP3-202ENST00000339677 C1QTNF8P60827 252 aa21.36■■□□□ 1.01
POLDIP3-202ENST00000339677 MSH5O43196 834 aa21.35■■□□□ 1.01
POLDIP3-202ENST00000339677 COL23A1Q86Y22 540 aaPredicted RBP21.35■■□□□ 1.01
POLDIP3-202ENST00000339677 GOLGB1Q14789 3259 aaKnown RBP21.34■■□□□ 1.01
POLDIP3-202ENST00000339677 MEGF6O75095 1541 aa21.34■■□□□ 1.01
POLDIP3-202ENST00000339677 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1.01
POLDIP3-202ENST00000339677 SLC24A1O60721 1099 aa21.33■■□□□ 1.01
POLDIP3-202ENST00000339677 HSP90AB2PQ58FF8 381 aa21.32■■□□□ 1
POLDIP3-202ENST00000339677 RAPGEF4Q8WZA2 1011 aa21.31■■□□□ 1
POLDIP3-202ENST00000339677 USP47Q96K76 1375 aa21.31■■□□□ 1
POLDIP3-202ENST00000339677 YBX3P16989 372 aaKnown RBP eCLIP21.29■■□□□ 1
POLDIP3-202ENST00000339677 TATP17735 454 aaPredicted RBP21.29■■□□□ 1
POLDIP3-202ENST00000339677 MSL1Q68DK7 614 aa21.29■■□□□ 1
POLDIP3-202ENST00000339677 CGNL1Q0VF96 1302 aa21.29■■□□□ 1
POLDIP3-202ENST00000339677 TMF1P82094 1093 aa21.28■■□□□ 1
POLDIP3-202ENST00000339677 MPRIPQ6WCQ1 1025 aa21.27■■□□□ 1
POLDIP3-202ENST00000339677 FAM208AQ9UK61 1670 aaKnown RBP21.27■■□□□ 1
POLDIP3-202ENST00000339677 RTL1A6NKG5 1358 aa21.26■□□□□ 0.99
POLDIP3-202ENST00000339677 CYP27B1O15528 508 aa21.25■□□□□ 0.99
POLDIP3-202ENST00000339677 CHD4Q14839 1912 aa21.25■□□□□ 0.99
POLDIP3-202ENST00000339677 RGPD2P0DJD1 1756 aa21.25■□□□□ 0.99
POLDIP3-202ENST00000339677 GRIN3BO60391 1043 aa21.24■□□□□ 0.99
POLDIP3-202ENST00000339677 INSRP06213 1382 aa21.23■□□□□ 0.99
POLDIP3-202ENST00000339677 GIGYF1O75420 1035 aaPredicted RBP21.23■□□□□ 0.99
POLDIP3-202ENST00000339677 SMIM5Q71RC9 77 aa21.23■□□□□ 0.99
POLDIP3-202ENST00000339677 CARD14Q9BXL6 1004 aa21.23■□□□□ 0.99
POLDIP3-202ENST00000339677 DOT1LQ8TEK3 1739 aa21.23■□□□□ 0.99
POLDIP3-202ENST00000339677 PCDH11XQ9BZA7 1347 aa21.22■□□□□ 0.99
POLDIP3-202ENST00000339677 PCDH11YQ9BZA8 1340 aa21.22■□□□□ 0.99
POLDIP3-202ENST00000339677 AMIGO3Q86WK7 504 aa21.21■□□□□ 0.99
POLDIP3-202ENST00000339677 EMILIN1Q9Y6C2 1016 aa21.21■□□□□ 0.99
POLDIP3-202ENST00000339677 PALLDQ8WX93 1383 aa21.21■□□□□ 0.99
POLDIP3-202ENST00000339677 LY75O60449 1722 aa21.21■□□□□ 0.99
POLDIP3-202ENST00000339677 COL24A1Q17RW2 1714 aa21.21■□□□□ 0.99
POLDIP3-202ENST00000339677 QSER1Q2KHR3 1735 aa21.21■□□□□ 0.99
POLDIP3-202ENST00000339677 SHANK3Q9BYB0 1731 aa21.21■□□□□ 0.99
POLDIP3-202ENST00000339677 SMG6Q86US8 1419 aaKnown RBP21.21■□□□□ 0.99
POLDIP3-202ENST00000339677 FLAD1Q8NFF5 587 aa21.19■□□□□ 0.98
POLDIP3-202ENST00000339677 PIGBQ92521 554 aa21.19■□□□□ 0.98
POLDIP3-202ENST00000339677 CD2APQ9Y5K6 639 aa21.19■□□□□ 0.98
POLDIP3-202ENST00000339677 TUBGCP6Q96RT7 1819 aa21.19■□□□□ 0.98
POLDIP3-202ENST00000339677 FLT4P35916 1363 aa21.19■□□□□ 0.98
POLDIP3-202ENST00000339677 PPM1GO15355 546 aaPredicted RBP21.18■□□□□ 0.98
POLDIP3-202ENST00000339677 CDCA8Q53HL2 280 aa21.16■□□□□ 0.98
POLDIP3-202ENST00000339677 SMARCC1Q92922 1105 aaPredicted RBP21.16■□□□□ 0.98
POLDIP3-202ENST00000339677 KIF24Q5T7B8 1368 aa21.15■□□□□ 0.98
POLDIP3-202ENST00000339677 PHF14O94880 888 aa21.15■□□□□ 0.98
POLDIP3-202ENST00000339677 HMGB2P26583 209 aaKnown RBP21.15■□□□□ 0.98
POLDIP3-202ENST00000339677 NKX1-1Q15270 411 aaPredicted RBP21.15■□□□□ 0.98
POLDIP3-202ENST00000339677 AK7Q96M32 723 aa21.15■□□□□ 0.98
POLDIP3-202ENST00000339677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.13■□□□□ 0.97
POLDIP3-202ENST00000339677 EYA1Q99502 592 aa21.13■□□□□ 0.97
POLDIP3-202ENST00000339677 WWC3Q9ULE0 1092 aa21.13■□□□□ 0.97
POLDIP3-202ENST00000339677 TIMELESSQ9UNS1 1208 aa21.13■□□□□ 0.97
POLDIP3-202ENST00000339677 SPG7Q9UQ90 795 aa21.13■□□□□ 0.97
POLDIP3-202ENST00000339677 LINC00116Q8NCU8 138 aa21.12■□□□□ 0.97
POLDIP3-202ENST00000339677 WASHC2AQ641Q2 1341 aa21.11■□□□□ 0.97
POLDIP3-202ENST00000339677 LOC102724428A0A0B4J2F2 783 aa21.11■□□□□ 0.97
POLDIP3-202ENST00000339677 SIK1P57059 783 aa21.11■□□□□ 0.97
POLDIP3-202ENST00000339677 ASAP1Q9ULH1 1129 aa21.11■□□□□ 0.97
POLDIP3-202ENST00000339677 NSD3Q9BZ95 1437 aa21.1■□□□□ 0.97
POLDIP3-202ENST00000339677 ITPK1Q13572 414 aa21.09■□□□□ 0.97
POLDIP3-202ENST00000339677 CEP350Q5VT06 3117 aa21.09■□□□□ 0.97
POLDIP3-202ENST00000339677 ATP10DQ9P241 1426 aa21.09■□□□□ 0.97
POLDIP3-202ENST00000339677 TMOD3Q9NYL9 352 aa21.08■□□□□ 0.97
POLDIP3-202ENST00000339677 POLKQ9UBT6 870 aa21.08■□□□□ 0.97
POLDIP3-202ENST00000339677 SSFA2P28290 1259 aa21.07■□□□□ 0.96
POLDIP3-202ENST00000339677 ATP6V1AP38606 617 aa21.07■□□□□ 0.96
POLDIP3-202ENST00000339677 ZNF526Q8TF50 670 aaPredicted RBP21.07■□□□□ 0.96
POLDIP3-202ENST00000339677 GPBP1L1Q9HC44 474 aaPredicted RBP21.07■□□□□ 0.96
POLDIP3-202ENST00000339677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.07■□□□□ 0.96
POLDIP3-202ENST00000339677 IGSF1Q8N6C5 1336 aa21.06■□□□□ 0.96
POLDIP3-202ENST00000339677 C5P01031 1676 aa21.06■□□□□ 0.96
POLDIP3-202ENST00000339677 PHKG2P15735 406 aa21.06■□□□□ 0.96
POLDIP3-202ENST00000339677 IFNL2Q8IZJ0 200 aa21.06■□□□□ 0.96
POLDIP3-202ENST00000339677 ATG3Q9NT62 314 aa21.06■□□□□ 0.96
POLDIP3-202ENST00000339677 GNPATO15228 680 aa21.05■□□□□ 0.96
POLDIP3-202ENST00000339677 TNNT2P45379 298 aaPredicted RBP21.05■□□□□ 0.96
POLDIP3-202ENST00000339677 NCAPD2Q15021 1401 aa21.04■□□□□ 0.96
POLDIP3-202ENST00000339677 C4BP0C0L5 1744 aa21.04■□□□□ 0.96
POLDIP3-202ENST00000339677 ZNF316A6NFI3 1004 aaPredicted RBP21.03■□□□□ 0.96
POLDIP3-202ENST00000339677 EIF4A2Q14240 407 aaKnown RBP21.03■□□□□ 0.96
POLDIP3-202ENST00000339677 POLR3GLQ9BT43 218 aa21.03■□□□□ 0.96
POLDIP3-202ENST00000339677 TOGARAM1Q9Y4F4 1720 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms