RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 HSP90AB2PQ58FF8 381 aa26.96■■□□□ 1.91
ITGA4-202ENST00000339307 NSD3Q9BZ95 1437 aa26.95■■□□□ 1.91
ITGA4-202ENST00000339307 PPM1GO15355 546 aaPredicted RBP26.95■■□□□ 1.9
ITGA4-202ENST00000339307 MEGF6O75095 1541 aa26.93■■□□□ 1.9
ITGA4-202ENST00000339307 TATP17735 454 aaPredicted RBP26.92■■□□□ 1.9
ITGA4-202ENST00000339307 CCER1Q8TC90 406 aaPredicted RBP26.92■■□□□ 1.9
ITGA4-202ENST00000339307 LRRC4BQ9NT99 713 aa26.92■■□□□ 1.9
ITGA4-202ENST00000339307 FLT4P35916 1363 aa26.91■■□□□ 1.9
ITGA4-202ENST00000339307 MTFR1LQ9H019 292 aa26.91■■□□□ 1.9
ITGA4-202ENST00000339307 INSRP06213 1382 aa26.9■■□□□ 1.9
ITGA4-202ENST00000339307 PTGER2P43116 358 aa26.9■■□□□ 1.9
ITGA4-202ENST00000339307 KCNQ4P56696 695 aa26.9■■□□□ 1.9
ITGA4-202ENST00000339307 ZNF827Q17R98 1081 aa26.9■■□□□ 1.9
ITGA4-202ENST00000339307 EMILIN1Q9Y6C2 1016 aa26.9■■□□□ 1.9
ITGA4-202ENST00000339307 MYOM1P52179 1685 aa26.9■■□□□ 1.9
ITGA4-202ENST00000339307 SLC27A3Q5K4L6 730 aa26.89■■□□□ 1.89
ITGA4-202ENST00000339307 CGNL1Q0VF96 1302 aa26.88■■□□□ 1.89
ITGA4-202ENST00000339307 DOT1LQ8TEK3 1739 aa26.88■■□□□ 1.89
ITGA4-202ENST00000339307 YY1P25490 414 aa26.85■■□□□ 1.89
ITGA4-202ENST00000339307 EIF4G2P78344 907 aaKnown RBP eCLIP26.85■■□□□ 1.89
ITGA4-202ENST00000339307 KIF24Q5T7B8 1368 aa26.85■■□□□ 1.89
ITGA4-202ENST00000339307 TFCP2L1Q9NZI6 479 aa26.84■■□□□ 1.89
ITGA4-202ENST00000339307 SHANK3Q9BYB0 1731 aa26.84■■□□□ 1.89
ITGA4-202ENST00000339307 TNNT2P45379 298 aaPredicted RBP26.83■■□□□ 1.89
ITGA4-202ENST00000339307 FHDC1Q9C0D6 1143 aaPredicted RBP26.83■■□□□ 1.89
ITGA4-202ENST00000339307 PAPPAQ13219 1627 aa26.83■■□□□ 1.89
ITGA4-202ENST00000339307 AKT1S1Q96B36 256 aa26.82■■□□□ 1.88
ITGA4-202ENST00000339307 CCNL1Q9UK58 526 aaPredicted RBP26.82■■□□□ 1.88
ITGA4-202ENST00000339307 PCDH11XQ9BZA7 1347 aa26.82■■□□□ 1.88
ITGA4-202ENST00000339307 PCDH11YQ9BZA8 1340 aa26.82■■□□□ 1.88
ITGA4-202ENST00000339307 HSPA5P11021 654 aaKnown RBP26.82■■□□□ 1.88
ITGA4-202ENST00000339307 ARXQ96QS3 562 aa26.81■■□□□ 1.88
ITGA4-202ENST00000339307 NSD2O96028 1365 aa26.8■■□□□ 1.88
ITGA4-202ENST00000339307 MSH5O43196 834 aa26.79■■□□□ 1.88
ITGA4-202ENST00000339307 KLHL34Q8N239 644 aa26.79■■□□□ 1.88
ITGA4-202ENST00000339307 SYT17Q9BSW7 474 aa26.79■■□□□ 1.88
ITGA4-202ENST00000339307 MPRIPQ6WCQ1 1025 aa26.78■■□□□ 1.88
ITGA4-202ENST00000339307 SGIP1Q9BQI5 828 aa26.76■■□□□ 1.87
ITGA4-202ENST00000339307 WASHC2AQ641Q2 1341 aa26.76■■□□□ 1.87
ITGA4-202ENST00000339307 PNPLA7Q6ZV29 1317 aa26.76■■□□□ 1.87
ITGA4-202ENST00000339307 CYP27B1O15528 508 aa26.74■■□□□ 1.87
ITGA4-202ENST00000339307 POLD1P28340 1107 aa26.74■■□□□ 1.87
ITGA4-202ENST00000339307 PANK3Q9H999 370 aa26.74■■□□□ 1.87
ITGA4-202ENST00000339307 POLKQ9UBT6 870 aa26.74■■□□□ 1.87
ITGA4-202ENST00000339307 SPG7Q9UQ90 795 aa26.74■■□□□ 1.87
ITGA4-202ENST00000339307 MAP2P11137 1827 aaKnown RBP26.74■■□□□ 1.87
ITGA4-202ENST00000339307 SLC16A10Q8TF71 515 aa26.73■■□□□ 1.87
ITGA4-202ENST00000339307 LY75O60449 1722 aa26.73■■□□□ 1.87
ITGA4-202ENST00000339307 EYA1Q99502 592 aa26.73■■□□□ 1.87
ITGA4-202ENST00000339307 PALLDQ8WX93 1383 aa26.69■■□□□ 1.86
ITGA4-202ENST00000339307 EIF4A2Q14240 407 aaKnown RBP26.67■■□□□ 1.86
ITGA4-202ENST00000339307 TUBGCP6Q96RT7 1819 aa26.66■■□□□ 1.86
ITGA4-202ENST00000339307 QSER1Q2KHR3 1735 aa26.66■■□□□ 1.86
ITGA4-202ENST00000339307 ANKRD26Q9UPS8 1709 aa26.66■■□□□ 1.86
ITGA4-202ENST00000339307 COL23A1Q86Y22 540 aaPredicted RBP26.65■■□□□ 1.86
ITGA4-202ENST00000339307 SMARCC1Q92922 1105 aaPredicted RBP26.65■■□□□ 1.86
ITGA4-202ENST00000339307 PELP1Q8IZL8 1130 aaKnown RBP26.65■■□□□ 1.86
ITGA4-202ENST00000339307 PIGBQ92521 554 aa26.65■■□□□ 1.86
ITGA4-202ENST00000339307 HMGB2P26583 209 aaKnown RBP26.64■■□□□ 1.85
ITGA4-202ENST00000339307 GPR162Q16538 588 aa26.64■■□□□ 1.85
ITGA4-202ENST00000339307 MORC1Q86VD1 984 aa26.64■■□□□ 1.85
ITGA4-202ENST00000339307 PKD1L3Q7Z443 1732 aa26.63■■□□□ 1.85
ITGA4-202ENST00000339307 MSL1Q68DK7 614 aa26.63■■□□□ 1.85
ITGA4-202ENST00000339307 IFNL2Q8IZJ0 200 aa26.63■■□□□ 1.85
ITGA4-202ENST00000339307 TMOD3Q9NYL9 352 aa26.63■■□□□ 1.85
ITGA4-202ENST00000339307 NCAPD2Q15021 1401 aa26.62■■□□□ 1.85
ITGA4-202ENST00000339307 ITGB4P16144 1822 aa26.61■■□□□ 1.85
ITGA4-202ENST00000339307 NKX1-1Q15270 411 aaPredicted RBP26.61■■□□□ 1.85
ITGA4-202ENST00000339307 AK7Q96M32 723 aa26.61■■□□□ 1.85
ITGA4-202ENST00000339307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.61■■□□□ 1.85
ITGA4-202ENST00000339307 KNSTRNQ9Y448 316 aa26.61■■□□□ 1.85
ITGA4-202ENST00000339307 TOGARAM1Q9Y4F4 1720 aa26.61■■□□□ 1.85
ITGA4-202ENST00000339307 C5P01031 1676 aa26.6■■□□□ 1.85
ITGA4-202ENST00000339307 PHKG2P15735 406 aa26.6■■□□□ 1.85
ITGA4-202ENST00000339307 MAP3K5Q99683 1374 aa26.59■■□□□ 1.85
ITGA4-202ENST00000339307 PHF14O94880 888 aa26.57■■□□□ 1.84
ITGA4-202ENST00000339307 FLAD1Q8NFF5 587 aa26.57■■□□□ 1.84
ITGA4-202ENST00000339307 ASAP1Q9ULH1 1129 aa26.55■■□□□ 1.84
ITGA4-202ENST00000339307 LOC102724428A0A0B4J2F2 783 aa26.54■■□□□ 1.84
ITGA4-202ENST00000339307 SIK1P57059 783 aa26.54■■□□□ 1.84
ITGA4-202ENST00000339307 NLGN2Q8NFZ4 835 aa26.54■■□□□ 1.84
ITGA4-202ENST00000339307 IGSF1Q8N6C5 1336 aa26.54■■□□□ 1.84
ITGA4-202ENST00000339307 PLEKHO1Q53GL0 409 aaPredicted RBP26.53■■□□□ 1.84
ITGA4-202ENST00000339307 TAF1LQ8IZX4 1826 aa26.53■■□□□ 1.84
ITGA4-202ENST00000339307 ATP6V1AP38606 617 aa26.52■■□□□ 1.84
ITGA4-202ENST00000339307 SMIM5Q71RC9 77 aa26.52■■□□□ 1.84
ITGA4-202ENST00000339307 C4BP0C0L5 1744 aa26.51■■□□□ 1.83
ITGA4-202ENST00000339307 ZNF530Q6P9A1 599 aaPredicted RBP26.5■■□□□ 1.83
ITGA4-202ENST00000339307 LINC00116Q8NCU8 138 aa26.5■■□□□ 1.83
ITGA4-202ENST00000339307 COL24A1Q17RW2 1714 aa26.5■■□□□ 1.83
ITGA4-202ENST00000339307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.49■■□□□ 1.83
ITGA4-202ENST00000339307 HSP90AB1P08238 724 aaKnown RBP26.49■■□□□ 1.83
ITGA4-202ENST00000339307 ZNF784Q8NCA9 323 aaPredicted RBP26.48■■□□□ 1.83
ITGA4-202ENST00000339307 RBM42Q9BTD8 480 aaKnown RBP26.48■■□□□ 1.83
ITGA4-202ENST00000339307 ATG3Q9NT62 314 aa26.48■■□□□ 1.83
ITGA4-202ENST00000339307 AMOTQ4VCS5 1084 aa26.48■■□□□ 1.83
ITGA4-202ENST00000339307 AMIGO3Q86WK7 504 aa26.48■■□□□ 1.83
ITGA4-202ENST00000339307 AEBP1Q8IUX7 1158 aa26.48■■□□□ 1.83
ITGA4-202ENST00000339307 KIF7Q2M1P5 1343 aa26.47■■□□□ 1.83
ITGA4-202ENST00000339307 GNPATO15228 680 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms