RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ZNF592Q92610 1267 aa17.13■□□□□ 0.33
PCDH8-201ENST00000338862 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
PCDH8-201ENST00000338862 RPAP2Q8IXW5 612 aaPredicted RBP17.12■□□□□ 0.33
PCDH8-201ENST00000338862 LRRCC1Q9C099 1032 aa17.12■□□□□ 0.33
PCDH8-201ENST00000338862 GADD45BO75293 160 aaPredicted RBP17.12■□□□□ 0.33
PCDH8-201ENST00000338862 GNAI2P04899 355 aa17.12■□□□□ 0.33
PCDH8-201ENST00000338862 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
PCDH8-201ENST00000338862 OFD1O75665 1012 aa17.12■□□□□ 0.33
PCDH8-201ENST00000338862 NUDT16Q96DE0 195 aaKnown RBP17.12■□□□□ 0.33
PCDH8-201ENST00000338862 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
PCDH8-201ENST00000338862 MYO5CQ9NQX4 1742 aa17.11■□□□□ 0.33
PCDH8-201ENST00000338862 CHAF1AQ13111 956 aaPredicted RBP17.11■□□□□ 0.33
PCDH8-201ENST00000338862 CBX1P83916 185 aa17.11■□□□□ 0.33
PCDH8-201ENST00000338862 CAMK4Q16566 473 aa17.11■□□□□ 0.33
PCDH8-201ENST00000338862 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
PCDH8-201ENST00000338862 IGSF3O75054 1194 aa17.11■□□□□ 0.33
PCDH8-201ENST00000338862 ANXA1P04083 346 aa17.11■□□□□ 0.33
PCDH8-201ENST00000338862 CLTCL1P53675 1640 aa17.11■□□□□ 0.33
PCDH8-201ENST00000338862 PDE1AP54750 535 aa17.11■□□□□ 0.33
PCDH8-201ENST00000338862 PALD1Q9ULE6 856 aa17.11■□□□□ 0.33
PCDH8-201ENST00000338862 MBD3O95983 291 aa17.1■□□□□ 0.33
PCDH8-201ENST00000338862 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
PCDH8-201ENST00000338862 RTEL1-TNFRSF6BF6WH68 1400 aa17.1■□□□□ 0.33
PCDH8-201ENST00000338862 RPGRIP1LQ68CZ1 1315 aa17.1■□□□□ 0.33
PCDH8-201ENST00000338862 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
PCDH8-201ENST00000338862 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
PCDH8-201ENST00000338862 MX1P20591 662 aa17.1■□□□□ 0.33
PCDH8-201ENST00000338862 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
PCDH8-201ENST00000338862 MADDQ8WXG6 1647 aa17.1■□□□□ 0.33
PCDH8-201ENST00000338862 A0A0U1RQG5 324 aaPredicted RBP17.09■□□□□ 0.33
PCDH8-201ENST00000338862 UBTFL1P0CB47 393 aaPredicted RBP17.09■□□□□ 0.33
PCDH8-201ENST00000338862 GIMAP6Q6P9H5 292 aa17.09■□□□□ 0.33
PCDH8-201ENST00000338862 PHF14O94880 888 aa17.09■□□□□ 0.33
PCDH8-201ENST00000338862 STK3Q13188 491 aa17.09■□□□□ 0.33
PCDH8-201ENST00000338862 CSPP1Q1MSJ5 1256 aa17.09■□□□□ 0.33
PCDH8-201ENST00000338862 TCEANC2Q96MN5 208 aa17.09■□□□□ 0.33
PCDH8-201ENST00000338862 DIAPH3Q9NSV4 1193 aa17.09■□□□□ 0.33
PCDH8-201ENST00000338862 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
PCDH8-201ENST00000338862 CEBPZQ03701 1054 aaKnown RBP17.08■□□□□ 0.33
PCDH8-201ENST00000338862 USP48Q86UV5 1035 aa17.08■□□□□ 0.33
PCDH8-201ENST00000338862 AK9Q5TCS8 1911 aa17.08■□□□□ 0.32
PCDH8-201ENST00000338862 SPDYE4A6NLX3 237 aa17.08■□□□□ 0.32
PCDH8-201ENST00000338862 CYB5RLQ6IPT4 315 aa17.08■□□□□ 0.32
PCDH8-201ENST00000338862 ZKSCAN5Q9Y2L8 839 aa17.08■□□□□ 0.32
PCDH8-201ENST00000338862 CCDC83Q8IWF9 413 aa17.07■□□□□ 0.32
PCDH8-201ENST00000338862 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
PCDH8-201ENST00000338862 ARHGAP45Q92619 1136 aa17.07■□□□□ 0.32
PCDH8-201ENST00000338862 IQGAP3Q86VI3 1631 aa17.07■□□□□ 0.32
PCDH8-201ENST00000338862 MSH6P52701 1360 aa17.07■□□□□ 0.32
PCDH8-201ENST00000338862 NPHP1O15259 732 aa17.06■□□□□ 0.32
PCDH8-201ENST00000338862 SLC26A8Q96RN1 970 aa17.06■□□□□ 0.32
PCDH8-201ENST00000338862 NSD2O96028 1365 aa17.06■□□□□ 0.32
PCDH8-201ENST00000338862 ADCY5O95622 1261 aa17.05■□□□□ 0.32
PCDH8-201ENST00000338862 SLC52A1Q9NWF4 448 aa17.05■□□□□ 0.32
PCDH8-201ENST00000338862 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCDH8-201ENST00000338862 TRPM2O94759 1503 aa17.05■□□□□ 0.32
PCDH8-201ENST00000338862 SRGAP3O43295 1099 aa17.05■□□□□ 0.32
PCDH8-201ENST00000338862 IL13P35225 146 aa17.05■□□□□ 0.32
PCDH8-201ENST00000338862 AIMP1Q12904 312 aaKnown RBP17.05■□□□□ 0.32
PCDH8-201ENST00000338862 PNMA6EA0A0J9YXQ4 647 aa17.04■□□□□ 0.32
PCDH8-201ENST00000338862 NPATQ14207 1427 aa17.04■□□□□ 0.32
PCDH8-201ENST00000338862 PPP1R9BQ96SB3 815 aa17.04■□□□□ 0.32
PCDH8-201ENST00000338862 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
PCDH8-201ENST00000338862 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
PCDH8-201ENST00000338862 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
PCDH8-201ENST00000338862 UNC13BO14795 1591 aa17.03■□□□□ 0.32
PCDH8-201ENST00000338862 FAM173BQ6P4H8 233 aa17.03■□□□□ 0.32
PCDH8-201ENST00000338862 CKAP2LQ8IYA6 745 aa17.03■□□□□ 0.32
PCDH8-201ENST00000338862 NECAB1Q8N987 351 aa17.03■□□□□ 0.32
PCDH8-201ENST00000338862 ESYT1Q9BSJ8 1104 aa17.03■□□□□ 0.32
PCDH8-201ENST00000338862 NOL7Q9UMY1 257 aaKnown RBP17.03■□□□□ 0.32
PCDH8-201ENST00000338862 ZNF445P59923 1031 aa17.03■□□□□ 0.32
PCDH8-201ENST00000338862 ZDHHC9Q9Y397 364 aa17.03■□□□□ 0.32
PCDH8-201ENST00000338862 HSP90B1P14625 803 aaKnown RBP17.03■□□□□ 0.32
PCDH8-201ENST00000338862 UNC5CLQ8IV45 518 aa17.03■□□□□ 0.32
PCDH8-201ENST00000338862 SIL1Q9H173 461 aa17.03■□□□□ 0.32
PCDH8-201ENST00000338862 TFIP11Q9UBB9 837 aaKnown RBP17.02■□□□□ 0.32
PCDH8-201ENST00000338862 NLRP6P59044 892 aa17.02■□□□□ 0.31
PCDH8-201ENST00000338862 HDGFL1Q5TGJ6 251 aa17.02■□□□□ 0.31
PCDH8-201ENST00000338862 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.31
PCDH8-201ENST00000338862 JAKMIP1Q96N16 626 aaKnown RBP17.02■□□□□ 0.31
PCDH8-201ENST00000338862 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.31
PCDH8-201ENST00000338862 ABCC4O15439 1325 aa17.01■□□□□ 0.31
PCDH8-201ENST00000338862 WDR33Q9C0J8 1336 aaKnown RBP17.01■□□□□ 0.31
PCDH8-201ENST00000338862 WASLO00401 505 aaPredicted RBP17.01■□□□□ 0.31
PCDH8-201ENST00000338862 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
PCDH8-201ENST00000338862 ATP7AQ04656 1500 aa17.01■□□□□ 0.31
PCDH8-201ENST00000338862 DDIT3P35638 169 aa17.01■□□□□ 0.31
PCDH8-201ENST00000338862 FLIIQ13045 1269 aa17.01■□□□□ 0.31
PCDH8-201ENST00000338862 BICD2Q8TD16 824 aa17.01■□□□□ 0.31
PCDH8-201ENST00000338862 GNAI3P08754 354 aa17■□□□□ 0.31
PCDH8-201ENST00000338862 PRPF40BQ6NWY9 871 aaKnown RBP17■□□□□ 0.31
PCDH8-201ENST00000338862 SASS6Q6UVJ0 657 aa17■□□□□ 0.31
PCDH8-201ENST00000338862 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
PCDH8-201ENST00000338862 IFIT2P09913 472 aaKnown RBP16.99■□□□□ 0.31
PCDH8-201ENST00000338862 TRIM5Q9C035 493 aa16.98■□□□□ 0.31
PCDH8-201ENST00000338862 SBNO2Q9Y2G9 1366 aa16.98■□□□□ 0.31
PCDH8-201ENST00000338862 KDM4AO75164 1064 aa16.98■□□□□ 0.31
PCDH8-201ENST00000338862 DNM1Q05193 864 aaKnown RBP16.98■□□□□ 0.31
PCDH8-201ENST00000338862 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms