RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 MCM10Q7L590 875 aa13.97□□□□□ -0.17
MS4A4A-201ENST00000337908 NBPF4Q96M43 638 aa13.97□□□□□ -0.17
MS4A4A-201ENST00000337908 MBIPQ9NS73 344 aa13.97□□□□□ -0.17
MS4A4A-201ENST00000337908 KIF16BQ96L93 1317 aa13.97□□□□□ -0.17
MS4A4A-201ENST00000337908 ZNF853P0CG23 659 aa13.97□□□□□ -0.17
MS4A4A-201ENST00000337908 CSB-PGBD3P0DP91 1061 aa13.97□□□□□ -0.17
MS4A4A-201ENST00000337908 PLEKHO1Q53GL0 409 aaPredicted RBP13.97□□□□□ -0.17
MS4A4A-201ENST00000337908 C20orf194Q5TEA3 1177 aa13.97□□□□□ -0.17
MS4A4A-201ENST00000337908 ZKSCAN2Q63HK3 967 aa13.97□□□□□ -0.17
MS4A4A-201ENST00000337908 BCL2L13Q9BXK5 485 aa13.97□□□□□ -0.17
MS4A4A-201ENST00000337908 CAMTA1Q9Y6Y1 1673 aa13.96□□□□□ -0.17
MS4A4A-201ENST00000337908 IPO8O15397 1037 aaKnown RBP13.96□□□□□ -0.17
MS4A4A-201ENST00000337908 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.17
MS4A4A-201ENST00000337908 CABLES1Q8TDN4 633 aa13.96□□□□□ -0.17
MS4A4A-201ENST00000337908 LRRC59Q96AG4 307 aaKnown RBP13.96□□□□□ -0.17
MS4A4A-201ENST00000337908 FTSJ3Q8IY81 847 aaKnown RBP13.95□□□□□ -0.18
MS4A4A-201ENST00000337908 CPDO75976 1380 aa13.95□□□□□ -0.18
MS4A4A-201ENST00000337908 TWISTNBQ3B726 338 aaPredicted RBP13.94□□□□□ -0.18
MS4A4A-201ENST00000337908 ERBB3P21860 1342 aa13.94□□□□□ -0.18
MS4A4A-201ENST00000337908 C1orf141Q5JVX7 400 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 NLRP2Q9NX02 1062 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 KIAA0232Q92628 1395 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 CRB1P82279 1406 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 NCAPD2Q15021 1401 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 CHL1O00533 1208 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 AAMPQ13685 434 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 ZNF530Q6P9A1 599 aaPredicted RBP13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 SSH1Q8WYL5 1049 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 RAPGEF4Q8WZA2 1011 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 PRDM11Q9NQV5 511 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 AXIN2Q9Y2T1 843 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 COL18A1P39060 1754 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 LRRC37A3O60309 1634 aa13.93□□□□□ -0.18
MS4A4A-201ENST00000337908 ABCA3Q99758 1704 aa13.92□□□□□ -0.18
MS4A4A-201ENST00000337908 ROBO1Q9Y6N7 1651 aa13.92□□□□□ -0.18
MS4A4A-201ENST00000337908 LTBP4Q8N2S1 1624 aa13.92□□□□□ -0.18
MS4A4A-201ENST00000337908 LMO7Q8WWI1 1683 aa13.92□□□□□ -0.18
MS4A4A-201ENST00000337908 CHRNA2Q15822 529 aa13.91□□□□□ -0.18
MS4A4A-201ENST00000337908 AKAP4Q5JQC9 854 aa13.91□□□□□ -0.18
MS4A4A-201ENST00000337908 DZIP1LQ8IYY4 767 aaKnown RBP13.91□□□□□ -0.18
MS4A4A-201ENST00000337908 PANK1Q8TE04 598 aa13.91□□□□□ -0.18
MS4A4A-201ENST00000337908 VAMP4O75379 141 aa13.9□□□□□ -0.18
MS4A4A-201ENST00000337908 TATP17735 454 aaPredicted RBP13.9□□□□□ -0.18
MS4A4A-201ENST00000337908 BABAM1Q9NWV8 329 aa13.9□□□□□ -0.18
MS4A4A-201ENST00000337908 COG6Q9Y2V7 657 aa13.9□□□□□ -0.18
MS4A4A-201ENST00000337908 ELL2O00472 640 aaPredicted RBP13.9□□□□□ -0.19
MS4A4A-201ENST00000337908 ATF7IPQ6VMQ6 1270 aa13.9□□□□□ -0.19
MS4A4A-201ENST00000337908 NOB1Q9ULX3 412 aaKnown RBP13.9□□□□□ -0.19
MS4A4A-201ENST00000337908 AHDC1Q5TGY3 1603 aaPredicted RBP13.89□□□□□ -0.19
MS4A4A-201ENST00000337908 BRPF1P55201 1214 aaPredicted RBP13.89□□□□□ -0.19
MS4A4A-201ENST00000337908 TAF7Q15545 349 aaPredicted RBP13.89□□□□□ -0.19
MS4A4A-201ENST00000337908 TSPYL6Q8N831 410 aa13.89□□□□□ -0.19
MS4A4A-201ENST00000337908 C8orf58Q8NAV2 365 aa13.89□□□□□ -0.19
MS4A4A-201ENST00000337908 CLUAP1Q96AJ1 413 aa13.89□□□□□ -0.19
MS4A4A-201ENST00000337908 SPG7Q9UQ90 795 aa13.89□□□□□ -0.19
MS4A4A-201ENST00000337908 PLEKHG2Q9H7P9 1386 aa13.88□□□□□ -0.19
MS4A4A-201ENST00000337908 TEFQ10587 303 aa13.88□□□□□ -0.19
MS4A4A-201ENST00000337908 CHMP4BQ9H444 224 aaKnown RBP13.88□□□□□ -0.19
MS4A4A-201ENST00000337908 OVOS2A0A0G2JMS6 1433 aa13.87□□□□□ -0.19
MS4A4A-201ENST00000337908 MVPQ14764 893 aaKnown RBP13.87□□□□□ -0.19
MS4A4A-201ENST00000337908 TOM1O60784 492 aa13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 EVA1CP58658 441 aa13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 IL17REQ8NFR9 667 aa13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 ARHGAP45Q92619 1136 aa13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 API5Q9BZZ5 524 aaKnown RBP13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 SOS1Q07889 1333 aaPredicted RBP13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 VIRMAQ69YN4 1812 aaKnown RBP13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 TRIM27P14373 513 aa13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 TOM1L2Q6ZVM7 507 aa13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 CENPQQ7L2Z9 268 aaPredicted RBP13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 ITPRIPQ8IWB1 547 aa13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 CHMP4AQ9BY43 222 aa13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 MIS18AQ9NYP9 233 aa13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 DDX19BQ9UMR2 479 aa13.86□□□□□ -0.19
MS4A4A-201ENST00000337908 PHLPP1O60346 1717 aa13.85□□□□□ -0.19
MS4A4A-201ENST00000337908 PARP4Q9UKK3 1724 aaKnown RBP13.85□□□□□ -0.19
MS4A4A-201ENST00000337908 STK31Q9BXU1 1019 aa13.85□□□□□ -0.19
MS4A4A-201ENST00000337908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.85□□□□□ -0.19
MS4A4A-201ENST00000337908 WDR17Q8IZU2 1322 aa13.85□□□□□ -0.19
MS4A4A-201ENST00000337908 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
MS4A4A-201ENST00000337908 COL22A1Q8NFW1 1626 aaPredicted RBP13.83□□□□□ -0.2
MS4A4A-201ENST00000337908 RNMTO43148 476 aaKnown RBP13.83□□□□□ -0.2
MS4A4A-201ENST00000337908 RLBP1P12271 317 aa13.83□□□□□ -0.2
MS4A4A-201ENST00000337908 MPRIPQ6WCQ1 1025 aa13.83□□□□□ -0.2
MS4A4A-201ENST00000337908 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
MS4A4A-201ENST00000337908 TCERG1O14776 1098 aaKnown RBP13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 HSP90AB1P08238 724 aaKnown RBP13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 TNNQ9UQP3 1299 aa13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 PKD1L3Q7Z443 1732 aa13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 COL14A1Q05707 1796 aaKnown RBP13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 CCDC30Q5VVM6 783 aa13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 IFNL2Q8IZJ0 200 aa13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 LGR6Q9HBX8 967 aa13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 STRN4Q9NRL3 753 aa13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 MEGF6O75095 1541 aa13.82□□□□□ -0.2
MS4A4A-201ENST00000337908 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
MS4A4A-201ENST00000337908 KRT24Q2M2I5 525 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms