RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 STRN4Q9NRL3 753 aa19.05■□□□□ 0.64
CBX3-201ENST00000337620 AMOTQ4VCS5 1084 aa19.04■□□□□ 0.64
CBX3-201ENST00000337620 TOM1L2Q6ZVM7 507 aa19.04■□□□□ 0.64
CBX3-201ENST00000337620 CFAP44Q96MT7 982 aa19.04■□□□□ 0.64
CBX3-201ENST00000337620 COL22A1Q8NFW1 1626 aaPredicted RBP19.04■□□□□ 0.64
CBX3-201ENST00000337620 WDR17Q8IZU2 1322 aa19.04■□□□□ 0.64
CBX3-201ENST00000337620 LMO7Q8WWI1 1683 aa19.04■□□□□ 0.64
CBX3-201ENST00000337620 HTATSF1O43719 755 aaKnown RBP19.04■□□□□ 0.64
CBX3-201ENST00000337620 MAP3K5Q99683 1374 aa19.03■□□□□ 0.64
CBX3-201ENST00000337620 ZNF853P0CG23 659 aa19.03■□□□□ 0.64
CBX3-201ENST00000337620 ZNF530Q6P9A1 599 aaPredicted RBP19.03■□□□□ 0.64
CBX3-201ENST00000337620 COL5A2P05997 1499 aaPredicted RBP19.03■□□□□ 0.64
CBX3-201ENST00000337620 FAM208AQ9UK61 1670 aaKnown RBP19.03■□□□□ 0.64
CBX3-201ENST00000337620 PLIN1O60240 522 aa19.03■□□□□ 0.64
CBX3-201ENST00000337620 MBIPQ9NS73 344 aa19.03■□□□□ 0.64
CBX3-201ENST00000337620 TATP17735 454 aaPredicted RBP19.02■□□□□ 0.64
CBX3-201ENST00000337620 BTG4Q9NY30 223 aa19.02■□□□□ 0.64
CBX3-201ENST00000337620 NUTM2BA6NNL0 878 aaPredicted RBP19.01■□□□□ 0.63
CBX3-201ENST00000337620 NUTM2EB1AL46 878 aaPredicted RBP19.01■□□□□ 0.63
CBX3-201ENST00000337620 BCAR3O75815 825 aa19.01■□□□□ 0.63
CBX3-201ENST00000337620 NUTM2AQ8IVF1 878 aaPredicted RBP19.01■□□□□ 0.63
CBX3-201ENST00000337620 ADAMTS2O95450 1211 aa19.01■□□□□ 0.63
CBX3-201ENST00000337620 LARP1Q6PKG0 1096 aaKnown RBP19■□□□□ 0.63
CBX3-201ENST00000337620 IL17REQ8NFR9 667 aa19■□□□□ 0.63
CBX3-201ENST00000337620 AKAP4Q5JQC9 854 aa19■□□□□ 0.63
CBX3-201ENST00000337620 C1orf141Q5JVX7 400 aa19■□□□□ 0.63
CBX3-201ENST00000337620 CRB1P82279 1406 aa18.99■□□□□ 0.63
CBX3-201ENST00000337620 RARSP54136 660 aaKnown RBP18.99■□□□□ 0.63
CBX3-201ENST00000337620 CT47B1P0C2W7 299 aaPredicted RBP18.98■□□□□ 0.63
CBX3-201ENST00000337620 CHL1O00533 1208 aa18.98■□□□□ 0.63
CBX3-201ENST00000337620 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.98■□□□□ 0.63
CBX3-201ENST00000337620 CARD10Q9BWT7 1032 aa18.98■□□□□ 0.63
CBX3-201ENST00000337620 MIS18AQ9NYP9 233 aa18.98■□□□□ 0.63
CBX3-201ENST00000337620 MEGF6O75095 1541 aa18.98■□□□□ 0.63
CBX3-201ENST00000337620 COL14A1Q05707 1796 aaKnown RBP18.97■□□□□ 0.63
CBX3-201ENST00000337620 SPG7Q9UQ90 795 aa18.97■□□□□ 0.63
CBX3-201ENST00000337620 MPRIPQ6WCQ1 1025 aa18.97■□□□□ 0.63
CBX3-201ENST00000337620 BCL2L13Q9BXK5 485 aa18.97■□□□□ 0.63
CBX3-201ENST00000337620 LGR6Q9HBX8 967 aa18.97■□□□□ 0.63
CBX3-201ENST00000337620 ELL2O00472 640 aaPredicted RBP18.96■□□□□ 0.63
CBX3-201ENST00000337620 USP35Q9P2H5 1018 aa18.96■□□□□ 0.63
CBX3-201ENST00000337620 TSPYL4Q9UJ04 414 aa18.95■□□□□ 0.62
CBX3-201ENST00000337620 ERICH6BQ5W0A0 696 aa18.95■□□□□ 0.62
CBX3-201ENST00000337620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.95■□□□□ 0.625e-7■■■□□ 16.3
CBX3-201ENST00000337620 TSPYL6Q8N831 410 aa18.94■□□□□ 0.62
CBX3-201ENST00000337620 TAF7Q15545 349 aaPredicted RBP18.94■□□□□ 0.62
CBX3-201ENST00000337620 C8orf58Q8NAV2 365 aa18.94■□□□□ 0.62
CBX3-201ENST00000337620 JCADQ9P266 1359 aa18.93■□□□□ 0.62
CBX3-201ENST00000337620 CANXP27824 592 aaKnown RBP18.93■□□□□ 0.62
CBX3-201ENST00000337620 FRAT1Q92837 279 aaPredicted RBP18.93■□□□□ 0.62
CBX3-201ENST00000337620 CEMIPQ8WUJ3 1361 aa18.93■□□□□ 0.62
CBX3-201ENST00000337620 RNMTO43148 476 aaKnown RBP18.92■□□□□ 0.62
CBX3-201ENST00000337620 IL2RBP14784 551 aa18.92■□□□□ 0.62
CBX3-201ENST00000337620 TWISTNBQ3B726 338 aaPredicted RBP18.92■□□□□ 0.62
CBX3-201ENST00000337620 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
CBX3-201ENST00000337620 SMC4Q9NTJ3 1288 aa18.92■□□□□ 0.62
CBX3-201ENST00000337620 VAMP4O75379 141 aa18.92■□□□□ 0.62
CBX3-201ENST00000337620 TEFQ10587 303 aa18.92■□□□□ 0.62
CBX3-201ENST00000337620 SSH1Q8WYL5 1049 aa18.92■□□□□ 0.62
CBX3-201ENST00000337620 LRRC37A3O60309 1634 aa18.92■□□□□ 0.62
CBX3-201ENST00000337620 PHKG2P15735 406 aa18.91■□□□□ 0.62
CBX3-201ENST00000337620 IFNL2Q8IZJ0 200 aa18.91■□□□□ 0.62
CBX3-201ENST00000337620 OVOS2A0A0G2JMS6 1433 aa18.91■□□□□ 0.62
CBX3-201ENST00000337620 KRT24Q2M2I5 525 aa18.91■□□□□ 0.62
CBX3-201ENST00000337620 PLEKHG2Q9H7P9 1386 aa18.91■□□□□ 0.62
CBX3-201ENST00000337620 ZCRB1Q8TBF4 217 aaKnown RBP18.9■□□□□ 0.62
CBX3-201ENST00000337620 EXOC6Q8TAG9 804 aa18.89■□□□□ 0.62
CBX3-201ENST00000337620 ZNF428Q96B54 188 aa18.89■□□□□ 0.62
CBX3-201ENST00000337620 CYP27B1O15528 508 aa18.89■□□□□ 0.61
CBX3-201ENST00000337620 HSPA1LP34931 641 aa18.89■□□□□ 0.61
CBX3-201ENST00000337620 ALDH1L2Q3SY69 923 aa18.88■□□□□ 0.61
CBX3-201ENST00000337620 BABAM1Q9NWV8 329 aa18.88■□□□□ 0.61
CBX3-201ENST00000337620 PPP4R2Q9NY27 417 aa18.88■□□□□ 0.61
CBX3-201ENST00000337620 PLCH1Q4KWH8 1693 aa18.88■□□□□ 0.61
CBX3-201ENST00000337620 PARP4Q9UKK3 1724 aaKnown RBP18.88■□□□□ 0.61
CBX3-201ENST00000337620 CRBNQ96SW2 442 aa18.88■□□□□ 0.61
CBX3-201ENST00000337620 PKD1L3Q7Z443 1732 aa18.87■□□□□ 0.61
CBX3-201ENST00000337620 TCERG1O14776 1098 aaKnown RBP18.86■□□□□ 0.61
CBX3-201ENST00000337620 BTBD11A6QL63 1104 aa18.86■□□□□ 0.61
CBX3-201ENST00000337620 C8orf37Q96NL8 207 aa18.86■□□□□ 0.61
CBX3-201ENST00000337620 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
CBX3-201ENST00000337620 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
CBX3-201ENST00000337620 HSP90AB1P08238 724 aaKnown RBP18.85■□□□□ 0.61
CBX3-201ENST00000337620 DDX54Q8TDD1 881 aaKnown RBP18.85■□□□□ 0.61
CBX3-201ENST00000337620 DCAF5Q96JK2 942 aa18.85■□□□□ 0.61
CBX3-201ENST00000337620 VIRMAQ69YN4 1812 aaKnown RBP18.85■□□□□ 0.61
CBX3-201ENST00000337620 NGLY1Q96IV0 654 aa18.85■□□□□ 0.61
CBX3-201ENST00000337620 SPATA31A6Q5VVP1 1343 aa18.85■□□□□ 0.61
CBX3-201ENST00000337620 ZKSCAN2Q63HK3 967 aa18.84■□□□□ 0.61
CBX3-201ENST00000337620 NOB1Q9ULX3 412 aaKnown RBP18.84■□□□□ 0.61
CBX3-201ENST00000337620 KDM6AO15550 1401 aaPredicted RBP18.84■□□□□ 0.61
CBX3-201ENST00000337620 PDE3AQ14432 1141 aa18.83■□□□□ 0.61
CBX3-201ENST00000337620 MRPL50Q8N5N7 158 aaKnown RBP18.83■□□□□ 0.6
CBX3-201ENST00000337620 PANK1Q8TE04 598 aa18.83■□□□□ 0.6
CBX3-201ENST00000337620 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.6
CBX3-201ENST00000337620 CLUAP1Q96AJ1 413 aa18.82■□□□□ 0.6
CBX3-201ENST00000337620 SLC52A2Q9HAB3 445 aa18.82■□□□□ 0.6
CBX3-201ENST00000337620 TNNQ9UQP3 1299 aa18.82■□□□□ 0.6
CBX3-201ENST00000337620 KIF16BQ96L93 1317 aa18.82■□□□□ 0.6
CBX3-201ENST00000337620 SLIT2O94813 1529 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms