RNA–Protein interactions for RNA: ENST00000336840.10

PAX3-202, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-202ENST00000336840 CARD10Q9BWT7 1032 aa16.45■□□□□ 0.22
PAX3-202ENST00000336840 SLIT2O94813 1529 aa16.45■□□□□ 0.22
PAX3-202ENST00000336840 ADAMTS7Q9UKP4 1686 aa16.44■□□□□ 0.22
PAX3-202ENST00000336840 HTATSF1O43719 755 aaKnown RBP16.44■□□□□ 0.22
PAX3-202ENST00000336840 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
PAX3-202ENST00000336840 TOM1L2Q6ZVM7 507 aa16.44■□□□□ 0.22
PAX3-202ENST00000336840 SHANK3Q9BYB0 1731 aa16.44■□□□□ 0.22
PAX3-202ENST00000336840 ADAMTS2O95450 1211 aa16.43■□□□□ 0.22
PAX3-202ENST00000336840 RAPGEF4Q8WZA2 1011 aa16.43■□□□□ 0.22
PAX3-202ENST00000336840 MYH16Q9H6N6 1097 aa16.43■□□□□ 0.22
PAX3-202ENST00000336840 LRP6O75581 1613 aa16.43■□□□□ 0.22
PAX3-202ENST00000336840 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
PAX3-202ENST00000336840 NUTM2BA6NNL0 878 aaPredicted RBP16.43■□□□□ 0.22
PAX3-202ENST00000336840 NUTM2EB1AL46 878 aaPredicted RBP16.43■□□□□ 0.22
PAX3-202ENST00000336840 EVA1CP58658 441 aa16.43■□□□□ 0.22
PAX3-202ENST00000336840 LARP1Q6PKG0 1096 aaKnown RBP16.43■□□□□ 0.22
PAX3-202ENST00000336840 NUTM2AQ8IVF1 878 aaPredicted RBP16.43■□□□□ 0.22
PAX3-202ENST00000336840 STRN4Q9NRL3 753 aa16.43■□□□□ 0.22
PAX3-202ENST00000336840 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.42■□□□□ 0.22
PAX3-202ENST00000336840 GNAT3A8MTJ3 354 aa16.42■□□□□ 0.22
PAX3-202ENST00000336840 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
PAX3-202ENST00000336840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.42■□□□□ 0.22
PAX3-202ENST00000336840 SCN11AQ9UI33 1791 aa16.42■□□□□ 0.22
PAX3-202ENST00000336840 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
PAX3-202ENST00000336840 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
PAX3-202ENST00000336840 FANCIQ9NVI1 1328 aa16.41■□□□□ 0.22
PAX3-202ENST00000336840 DCTN1Q14203 1278 aa16.4■□□□□ 0.22
PAX3-202ENST00000336840 RTF1Q92541 710 aaKnown RBP16.4■□□□□ 0.22
PAX3-202ENST00000336840 SIPA1L3O60292 1781 aaPredicted RBP16.4■□□□□ 0.22
PAX3-202ENST00000336840 ZNF853P0CG23 659 aa16.4■□□□□ 0.22
PAX3-202ENST00000336840 AKAP4Q5JQC9 854 aa16.4■□□□□ 0.22
PAX3-202ENST00000336840 ZNF530Q6P9A1 599 aaPredicted RBP16.4■□□□□ 0.22
PAX3-202ENST00000336840 GNAI1P63096 354 aa16.39■□□□□ 0.21
PAX3-202ENST00000336840 MCM10Q7L590 875 aa16.39■□□□□ 0.21
PAX3-202ENST00000336840 CEMIPQ8WUJ3 1361 aa16.39■□□□□ 0.21
PAX3-202ENST00000336840 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
PAX3-202ENST00000336840 DISP2A7MBM2 1401 aa16.38■□□□□ 0.21
PAX3-202ENST00000336840 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
PAX3-202ENST00000336840 SPG7Q9UQ90 795 aa16.38■□□□□ 0.21
PAX3-202ENST00000336840 IL2RBP14784 551 aa16.37■□□□□ 0.21
PAX3-202ENST00000336840 TSR2Q969E8 191 aaKnown RBP16.37■□□□□ 0.21
PAX3-202ENST00000336840 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
PAX3-202ENST00000336840 KDM3BQ7LBC6 1761 aa16.37■□□□□ 0.21
PAX3-202ENST00000336840 RNF123Q5XPI4 1314 aa16.36■□□□□ 0.21
PAX3-202ENST00000336840 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
PAX3-202ENST00000336840 IL17REQ8NFR9 667 aa16.36■□□□□ 0.21
PAX3-202ENST00000336840 FBXO41Q8TF61 875 aa16.35■□□□□ 0.21
PAX3-202ENST00000336840 BCL9LQ86UU0 1499 aa16.35■□□□□ 0.21
PAX3-202ENST00000336840 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
PAX3-202ENST00000336840 MBIPQ9NS73 344 aa16.35■□□□□ 0.21
PAX3-202ENST00000336840 SPATA31A1Q5TZJ5 1347 aa16.34■□□□□ 0.21
PAX3-202ENST00000336840 CHL1O00533 1208 aa16.34■□□□□ 0.21
PAX3-202ENST00000336840 PHKG2P15735 406 aa16.34■□□□□ 0.21
PAX3-202ENST00000336840 FNBP4Q8N3X1 1017 aaPredicted RBP16.34■□□□□ 0.21
PAX3-202ENST00000336840 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
PAX3-202ENST00000336840 MRC1P22897 1456 aa16.33■□□□□ 0.21
PAX3-202ENST00000336840 IFNL2Q8IZJ0 200 aa16.33■□□□□ 0.21
PAX3-202ENST00000336840 C8orf37Q96NL8 207 aa16.33■□□□□ 0.21
PAX3-202ENST00000336840 KDM6AO15550 1401 aaPredicted RBP16.33■□□□□ 0.2
PAX3-202ENST00000336840 PCDH11XQ9BZA7 1347 aa16.33■□□□□ 0.2
PAX3-202ENST00000336840 PCDH11YQ9BZA8 1340 aa16.33■□□□□ 0.2
PAX3-202ENST00000336840 EXOSC9Q06265 439 aaKnown RBP16.33■□□□□ 0.2
PAX3-202ENST00000336840 UNC5CLQ8IV45 518 aa16.33■□□□□ 0.2
PAX3-202ENST00000336840 ZCRB1Q8TBF4 217 aaKnown RBP16.33■□□□□ 0.2
PAX3-202ENST00000336840 THRAP3Q9Y2W1 955 aaKnown RBP16.33■□□□□ 0.2
PAX3-202ENST00000336840 SPATA31A5Q5VU36 1347 aa16.32■□□□□ 0.2
PAX3-202ENST00000336840 SPATA31A7Q8IWB4 1347 aa16.32■□□□□ 0.2
PAX3-202ENST00000336840 CYP27B1O15528 508 aa16.32■□□□□ 0.2
PAX3-202ENST00000336840 RNMTO43148 476 aaKnown RBP16.32■□□□□ 0.2
PAX3-202ENST00000336840 NGLY1Q96IV0 654 aa16.32■□□□□ 0.2
PAX3-202ENST00000336840 BABAM1Q9NWV8 329 aa16.32■□□□□ 0.2
PAX3-202ENST00000336840 USP35Q9P2H5 1018 aa16.32■□□□□ 0.2
PAX3-202ENST00000336840 MPRIPQ6WCQ1 1025 aa16.31■□□□□ 0.2
PAX3-202ENST00000336840 LGR6Q9HBX8 967 aa16.31■□□□□ 0.2
PAX3-202ENST00000336840 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
PAX3-202ENST00000336840 CDCA7Q9BWT1 371 aaPredicted RBP16.3■□□□□ 0.2
PAX3-202ENST00000336840 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
PAX3-202ENST00000336840 TNS2Q63HR2 1409 aa16.3■□□□□ 0.2
PAX3-202ENST00000336840 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
PAX3-202ENST00000336840 TAF7Q15545 349 aaPredicted RBP16.29■□□□□ 0.2
PAX3-202ENST00000336840 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
PAX3-202ENST00000336840 VPS72Q15906 364 aa16.29■□□□□ 0.2
PAX3-202ENST00000336840 MEX3CQ5U5Q3 659 aaKnown RBP16.29■□□□□ 0.2
PAX3-202ENST00000336840 TSPYL4Q9UJ04 414 aa16.29■□□□□ 0.2
PAX3-202ENST00000336840 DCAF5Q96JK2 942 aa16.28■□□□□ 0.2
PAX3-202ENST00000336840 NEFLP07196 543 aa16.28■□□□□ 0.2
PAX3-202ENST00000336840 TEFQ10587 303 aa16.28■□□□□ 0.2
PAX3-202ENST00000336840 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
PAX3-202ENST00000336840 RARSP54136 660 aaKnown RBP16.27■□□□□ 0.2
PAX3-202ENST00000336840 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
PAX3-202ENST00000336840 ZNF428Q96B54 188 aa16.27■□□□□ 0.2
PAX3-202ENST00000336840 USP21Q9UK80 565 aa16.27■□□□□ 0.2
PAX3-202ENST00000336840 ITGB4P16144 1822 aa16.26■□□□□ 0.19
PAX3-202ENST00000336840 THSD7AQ9UPZ6 1657 aa16.26■□□□□ 0.19
PAX3-202ENST00000336840 CACNA1FO60840 1977 aa16.26■□□□□ 0.19
PAX3-202ENST00000336840 PAPPAQ13219 1627 aa16.26■□□□□ 0.19
PAX3-202ENST00000336840 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
PAX3-202ENST00000336840 GLI3P10071 1580 aa16.25■□□□□ 0.19
PAX3-202ENST00000336840 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
PAX3-202ENST00000336840 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms