RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
CCDC87-201ENST00000333861 HS1BP3Q53T59 392 aa13.58□□□□□ -0.24
CCDC87-201ENST00000333861 BMP2KLQ5H9B9 411 aa13.58□□□□□ -0.24
CCDC87-201ENST00000333861 MTERF4Q7Z6M4 381 aaKnown RBP13.58□□□□□ -0.24
CCDC87-201ENST00000333861 MYRIPQ8NFW9 859 aa13.58□□□□□ -0.24
CCDC87-201ENST00000333861 USP25Q9UHP3 1055 aa13.58□□□□□ -0.24
CCDC87-201ENST00000333861 NAP1L2Q9ULW6 460 aaPredicted RBP13.58□□□□□ -0.24
CCDC87-201ENST00000333861 ADGRB3O60242 1522 aa13.58□□□□□ -0.24
CCDC87-201ENST00000333861 MAP4K4O95819 1239 aaPredicted RBP13.58□□□□□ -0.24
CCDC87-201ENST00000333861 PTMSP20962 102 aa13.58□□□□□ -0.24
CCDC87-201ENST00000333861 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
CCDC87-201ENST00000333861 C8orf58Q8NAV2 365 aa13.58□□□□□ -0.24
CCDC87-201ENST00000333861 PLEKHF1Q96S99 279 aa13.58□□□□□ -0.24
CCDC87-201ENST00000333861 MIS18AQ9NYP9 233 aa13.58□□□□□ -0.24
CCDC87-201ENST00000333861 PLEKHM2Q8IWE5 1019 aa13.57□□□□□ -0.24
CCDC87-201ENST00000333861 NEK4P51957 841 aa13.57□□□□□ -0.24
CCDC87-201ENST00000333861 UTP14CQ5TAP6 766 aaKnown RBP13.57□□□□□ -0.24
CCDC87-201ENST00000333861 NECTIN2Q92692 538 aa13.57□□□□□ -0.24
CCDC87-201ENST00000333861 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
CCDC87-201ENST00000333861 CDC45O75419 566 aa13.57□□□□□ -0.24
CCDC87-201ENST00000333861 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
CCDC87-201ENST00000333861 SPC24Q8NBT2 197 aa13.57□□□□□ -0.24
CCDC87-201ENST00000333861 TNRQ92752 1358 aa13.56□□□□□ -0.24
CCDC87-201ENST00000333861 IQGAP1P46940 1657 aa13.56□□□□□ -0.24
CCDC87-201ENST00000333861 RPGRIP1LQ68CZ1 1315 aa13.56□□□□□ -0.24
CCDC87-201ENST00000333861 SDSP20132 328 aa13.56□□□□□ -0.24
CCDC87-201ENST00000333861 NOLC1Q14978 699 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC87-201ENST00000333861 TMEM51Q9NW97 253 aa13.56□□□□□ -0.24
CCDC87-201ENST00000333861 ZNF771Q7L3S4 317 aaPredicted RBP13.55□□□□□ -0.24
CCDC87-201ENST00000333861 PALD1Q9ULE6 856 aa13.55□□□□□ -0.24
CCDC87-201ENST00000333861 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
CCDC87-201ENST00000333861 SLC4A10Q6U841 1118 aa13.54□□□□□ -0.24
CCDC87-201ENST00000333861 USP26Q9BXU7 913 aa13.54□□□□□ -0.24
CCDC87-201ENST00000333861 IQSEC2Q5JU85 1478 aa13.54□□□□□ -0.24
CCDC87-201ENST00000333861 KDM5AP29375 1690 aaKnown RBP13.54□□□□□ -0.24
CCDC87-201ENST00000333861 IBTKQ9P2D0 1353 aaPredicted RBP13.54□□□□□ -0.24
CCDC87-201ENST00000333861 NUCB2P80303 420 aa13.54□□□□□ -0.24
CCDC87-201ENST00000333861 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
CCDC87-201ENST00000333861 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
CCDC87-201ENST00000333861 PDCL2Q8N4E4 241 aa13.53□□□□□ -0.24
CCDC87-201ENST00000333861 NAA30Q147X3 362 aaPredicted RBP13.53□□□□□ -0.24
CCDC87-201ENST00000333861 C14orf93Q9H972 538 aaKnown RBP13.53□□□□□ -0.24
CCDC87-201ENST00000333861 PIK3C2BO00750 1634 aa13.53□□□□□ -0.24
CCDC87-201ENST00000333861 MYO5BQ9ULV0 1848 aa13.53□□□□□ -0.24
CCDC87-201ENST00000333861 VAMP4O75379 141 aa13.53□□□□□ -0.24
CCDC87-201ENST00000333861 F6X3S4 739 aa13.52□□□□□ -0.24
CCDC87-201ENST00000333861 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.24
CCDC87-201ENST00000333861 MRPL50Q8N5N7 158 aaKnown RBP13.52□□□□□ -0.24
CCDC87-201ENST00000333861 RILPL2Q969X0 211 aa13.52□□□□□ -0.24
CCDC87-201ENST00000333861 MBIPQ9NS73 344 aa13.52□□□□□ -0.24
CCDC87-201ENST00000333861 EMILIN1Q9Y6C2 1016 aa13.52□□□□□ -0.24
CCDC87-201ENST00000333861 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
CCDC87-201ENST00000333861 ZBTB9Q96C00 473 aa13.52□□□□□ -0.25
CCDC87-201ENST00000333861 EXOC6BQ9Y2D4 811 aa13.52□□□□□ -0.25
CCDC87-201ENST00000333861 MYOM2P54296 1465 aa13.52□□□□□ -0.25
CCDC87-201ENST00000333861 DIAPH1O60610 1272 aaKnown RBP13.51□□□□□ -0.25
CCDC87-201ENST00000333861 CPA1P15085 419 aa13.51□□□□□ -0.25
CCDC87-201ENST00000333861 CLEC17AQ6ZS10 378 aa13.51□□□□□ -0.25
CCDC87-201ENST00000333861 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
CCDC87-201ENST00000333861 FYB1O15117 783 aa13.51□□□□□ -0.25
CCDC87-201ENST00000333861 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
CCDC87-201ENST00000333861 TSPY26PQ9H489 355 aa13.51□□□□□ -0.25
CCDC87-201ENST00000333861 SPATA31D1Q6ZQQ2 1576 aa13.51□□□□□ -0.25
CCDC87-201ENST00000333861 NPC1L1Q9UHC9 1359 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 SLC24A1O60721 1099 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 TMEM131LA2VDJ0 1609 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 A2ML1A8K2U0 1454 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 RIOK3O14730 519 aaKnown RBP13.5□□□□□ -0.25
CCDC87-201ENST00000333861 RRS1Q15050 365 aaKnown RBP13.5□□□□□ -0.25
CCDC87-201ENST00000333861 TTC22Q5TAA0 569 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 MEIS3Q99687 375 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 GTPBP4Q9BZE4 634 aaKnown RBP13.5□□□□□ -0.25
CCDC87-201ENST00000333861 NEXMIFQ5QGS0 1516 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 ADCY5O95622 1261 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 MCM5P33992 734 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
CCDC87-201ENST00000333861 TMX3Q96JJ7 454 aa13.5□□□□□ -0.25
CCDC87-201ENST00000333861 RIMS2Q9UQ26 1411 aa13.49□□□□□ -0.25
CCDC87-201ENST00000333861 TRIM6-TRIM34B2RNG4 842 aa13.49□□□□□ -0.25
CCDC87-201ENST00000333861 RABEP1Q15276 862 aa13.49□□□□□ -0.25
CCDC87-201ENST00000333861 CHMP4AQ9BY43 222 aa13.49□□□□□ -0.25
CCDC87-201ENST00000333861 PPLO60437 1756 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 NGEFQ8N5V2 710 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 PIBF1Q8WXW3 757 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 CABP1Q9NZU7 370 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 KIF20AO95235 890 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 GIMAP6Q6P9H5 292 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 USP48Q86UV5 1035 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 IL25Q9H293 177 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 ANO2Q9NQ90 1003 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 PYCARDQ9ULZ3 195 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 CNPY2Q9Y2B0 182 aa13.48□□□□□ -0.25
CCDC87-201ENST00000333861 LETM1O95202 739 aaPredicted RBP13.47□□□□□ -0.25
CCDC87-201ENST00000333861 NEURL4Q96JN8 1562 aa13.47□□□□□ -0.25
CCDC87-201ENST00000333861 A0A1W2PP64 1363 aa13.47□□□□□ -0.25
CCDC87-201ENST00000333861 FER1L4A9Z1Z3 1794 aa13.47□□□□□ -0.25
CCDC87-201ENST00000333861 AP5Z1O43299 807 aa13.47□□□□□ -0.25
CCDC87-201ENST00000333861 FIBPO43427 364 aa13.47□□□□□ -0.25
CCDC87-201ENST00000333861 MCM10Q7L590 875 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms