RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 EYA1Q99502 592 aa17.91■□□□□ 0.46
TUBB2A-201ENST00000333628 IL13P35225 146 aa17.91■□□□□ 0.46
TUBB2A-201ENST00000333628 DEFB132Q7Z7B7 95 aa17.91■□□□□ 0.46
TUBB2A-201ENST00000333628 USHBP1Q8N6Y0 703 aa17.91■□□□□ 0.46
TUBB2A-201ENST00000333628 MARCH10Q8NA82 808 aaPredicted RBP17.91■□□□□ 0.46
TUBB2A-201ENST00000333628 EXOC5O00471 708 aa17.9■□□□□ 0.46
TUBB2A-201ENST00000333628 TRIM37O94972 964 aa17.9■□□□□ 0.46
TUBB2A-201ENST00000333628 DIAPH1O60610 1272 aaKnown RBP17.89■□□□□ 0.45
TUBB2A-201ENST00000333628 TNS2Q63HR2 1409 aa17.89■□□□□ 0.45
TUBB2A-201ENST00000333628 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
TUBB2A-201ENST00000333628 OVOS2A0A0G2JMS6 1433 aa17.88■□□□□ 0.45
TUBB2A-201ENST00000333628 SF3B2Q13435 895 aaKnown RBP17.88■□□□□ 0.45
TUBB2A-201ENST00000333628 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
TUBB2A-201ENST00000333628 KAT6BQ8WYB5 2073 aa17.88■□□□□ 0.45
TUBB2A-201ENST00000333628 HNRNPUQ00839 825 aaKnown RBP eCLIP17.87■□□□□ 0.45
TUBB2A-201ENST00000333628 SHANK3Q9BYB0 1731 aa17.87■□□□□ 0.45
TUBB2A-201ENST00000333628 MEGF6O75095 1541 aa17.87■□□□□ 0.45
TUBB2A-201ENST00000333628 IGSF1Q8N6C5 1336 aa17.85■□□□□ 0.45
TUBB2A-201ENST00000333628 COL3A1P02461 1466 aaPredicted RBP17.85■□□□□ 0.45
TUBB2A-201ENST00000333628 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
TUBB2A-201ENST00000333628 EN1Q05925 392 aaPredicted RBP17.83■□□□□ 0.45
TUBB2A-201ENST00000333628 PTF1AQ7RTS3 328 aa17.83■□□□□ 0.45
TUBB2A-201ENST00000333628 RAPGEF4Q8WZA2 1011 aa17.83■□□□□ 0.45
TUBB2A-201ENST00000333628 ZBED9Q6R2W3 1325 aa17.83■□□□□ 0.44
TUBB2A-201ENST00000333628 BAG6P46379 1132 aa17.83■□□□□ 0.44
TUBB2A-201ENST00000333628 SULT6B1Q6IMI4 303 aa17.83■□□□□ 0.44
TUBB2A-201ENST00000333628 NCAPD2Q15021 1401 aa17.83■□□□□ 0.44
TUBB2A-201ENST00000333628 U2SURPO15042 1029 aaKnown RBP17.82■□□□□ 0.44
TUBB2A-201ENST00000333628 APBA3O96018 575 aa17.82■□□□□ 0.44
TUBB2A-201ENST00000333628 TATP17735 454 aaPredicted RBP17.82■□□□□ 0.44
TUBB2A-201ENST00000333628 DDX54Q8TDD1 881 aaKnown RBP17.82■□□□□ 0.44
TUBB2A-201ENST00000333628 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
TUBB2A-201ENST00000333628 BCL9O00512 1426 aa17.81■□□□□ 0.44
TUBB2A-201ENST00000333628 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
TUBB2A-201ENST00000333628 HMOX1P09601 288 aa17.8■□□□□ 0.44
TUBB2A-201ENST00000333628 MRS2Q9HD23 443 aa17.8■□□□□ 0.44
TUBB2A-201ENST00000333628 ZCRB1Q8TBF4 217 aaKnown RBP17.79■□□□□ 0.44
TUBB2A-201ENST00000333628 NHSQ6T4R5 1651 aa17.79■□□□□ 0.44
TUBB2A-201ENST00000333628 KCNQ2O43526 872 aa17.79■□□□□ 0.44
TUBB2A-201ENST00000333628 EZH2Q15910 746 aaKnown RBP17.79■□□□□ 0.44
TUBB2A-201ENST00000333628 ACSBG1Q96GR2 724 aa17.79■□□□□ 0.44
TUBB2A-201ENST00000333628 PKD1L3Q7Z443 1732 aa17.78■□□□□ 0.44
TUBB2A-201ENST00000333628 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
TUBB2A-201ENST00000333628 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
TUBB2A-201ENST00000333628 KDRP35968 1356 aa17.78■□□□□ 0.44
TUBB2A-201ENST00000333628 DOT1LQ8TEK3 1739 aa17.77■□□□□ 0.44
TUBB2A-201ENST00000333628 CAMKK2Q96RR4 588 aa17.77■□□□□ 0.44
TUBB2A-201ENST00000333628 BCL11BQ9C0K0 894 aaPredicted RBP17.77■□□□□ 0.44
TUBB2A-201ENST00000333628 CCDC184Q52MB2 194 aa17.76■□□□□ 0.43
TUBB2A-201ENST00000333628 RREB1Q92766 1687 aa17.76■□□□□ 0.43
TUBB2A-201ENST00000333628 BTAF1O14981 1849 aa17.76■□□□□ 0.43
TUBB2A-201ENST00000333628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.75■□□□□ 0.43
TUBB2A-201ENST00000333628 SPG7Q9UQ90 795 aa17.75■□□□□ 0.43
TUBB2A-201ENST00000333628 FCHSD2O94868 740 aa17.74■□□□□ 0.43
TUBB2A-201ENST00000333628 RGPD3A6NKT7 1758 aaPredicted RBP17.74■□□□□ 0.43
TUBB2A-201ENST00000333628 RGPD4Q7Z3J3 1758 aa17.74■□□□□ 0.43
TUBB2A-201ENST00000333628 NUP188Q5SRE5 1749 aa17.73■□□□□ 0.43
TUBB2A-201ENST00000333628 PLEKHO1Q53GL0 409 aaPredicted RBP17.73■□□□□ 0.43
TUBB2A-201ENST00000333628 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
TUBB2A-201ENST00000333628 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
TUBB2A-201ENST00000333628 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
TUBB2A-201ENST00000333628 CYP27B1O15528 508 aa17.72■□□□□ 0.43
TUBB2A-201ENST00000333628 AMOTQ4VCS5 1084 aa17.72■□□□□ 0.43
TUBB2A-201ENST00000333628 TOGARAM1Q9Y4F4 1720 aa17.71■□□□□ 0.42
TUBB2A-201ENST00000333628 PLSCR1O15162 318 aa17.7■□□□□ 0.42
TUBB2A-201ENST00000333628 PRKAR2BP31323 418 aa17.7■□□□□ 0.42
TUBB2A-201ENST00000333628 ITGB4P16144 1822 aa17.7■□□□□ 0.42
TUBB2A-201ENST00000333628 PLEKHG2Q9H7P9 1386 aa17.7■□□□□ 0.42
TUBB2A-201ENST00000333628 PRIM1P49642 420 aaKnown RBP17.7■□□□□ 0.42
TUBB2A-201ENST00000333628 WDR43Q15061 677 aaKnown RBP eCLIP17.7■□□□□ 0.42
TUBB2A-201ENST00000333628 SYTL4Q96C24 671 aaPredicted RBP17.7■□□□□ 0.42
TUBB2A-201ENST00000333628 IFNL2Q8IZJ0 200 aa17.69■□□□□ 0.42
TUBB2A-201ENST00000333628 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
TUBB2A-201ENST00000333628 PHACTR3Q96KR7 559 aa17.69■□□□□ 0.42
TUBB2A-201ENST00000333628 ADAMTS8Q9UP79 889 aa17.69■□□□□ 0.42
TUBB2A-201ENST00000333628 PHKG2P15735 406 aa17.68■□□□□ 0.42
TUBB2A-201ENST00000333628 MTHFSDQ2M296 383 aaKnown RBP17.68■□□□□ 0.42
TUBB2A-201ENST00000333628 ZNF530Q6P9A1 599 aaPredicted RBP17.68■□□□□ 0.42
TUBB2A-201ENST00000333628 PROM2Q8N271 834 aa17.68■□□□□ 0.42
TUBB2A-201ENST00000333628 PSDA5PKW4 1024 aaPredicted RBP17.66■□□□□ 0.42
TUBB2A-201ENST00000333628 NKX1-1Q15270 411 aaPredicted RBP17.66■□□□□ 0.42
TUBB2A-201ENST00000333628 PLEKHF1Q96S99 279 aa17.66■□□□□ 0.42
TUBB2A-201ENST00000333628 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
TUBB2A-201ENST00000333628 PPP4R2Q9NY27 417 aa17.66■□□□□ 0.42
TUBB2A-201ENST00000333628 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
TUBB2A-201ENST00000333628 TXNRD1Q16881 649 aa17.65■□□□□ 0.42
TUBB2A-201ENST00000333628 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
TUBB2A-201ENST00000333628 R3HDM1Q15032 1099 aaKnown RBP17.64■□□□□ 0.41
TUBB2A-201ENST00000333628 AKAP4Q5JQC9 854 aa17.64■□□□□ 0.41
TUBB2A-201ENST00000333628 LY75O60449 1722 aa17.63■□□□□ 0.41
TUBB2A-201ENST00000333628 NEFMP07197 916 aa17.63■□□□□ 0.41
TUBB2A-201ENST00000333628 GAS2L2Q8NHY3 880 aa17.63■□□□□ 0.41
TUBB2A-201ENST00000333628 VIRMAQ69YN4 1812 aaKnown RBP17.62■□□□□ 0.41
TUBB2A-201ENST00000333628 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
TUBB2A-201ENST00000333628 MPRIPQ6WCQ1 1025 aa17.62■□□□□ 0.41
TUBB2A-201ENST00000333628 CCDC146Q8IYE0 955 aa17.62■□□□□ 0.41
TUBB2A-201ENST00000333628 DCAF5Q96JK2 942 aa17.62■□□□□ 0.41
TUBB2A-201ENST00000333628 ANO8Q9HCE9 1232 aaPredicted RBP17.61■□□□□ 0.41
TUBB2A-201ENST00000333628 NBPF14Q5TI25 921 aa17.6■□□□□ 0.41
TUBB2A-201ENST00000333628 RUNDC1Q96C34 613 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms