RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 ZCRB1Q8TBF4 217 aaKnown RBP27.51■■□□□ 1.99
MRPL40-201ENST00000333130 NUDCQ9Y266 331 aa27.51■■□□□ 1.99
MRPL40-201ENST00000333130 KAT6BQ8WYB5 2073 aa27.5■■□□□ 1.99
MRPL40-201ENST00000333130 SF3B2Q13435 895 aaKnown RBP27.49■■□□□ 1.99
MRPL40-201ENST00000333130 FAM182BQ5T319 152 aa27.49■■□□□ 1.99
MRPL40-201ENST00000333130 CCDC125Q86Z20 511 aa27.49■■□□□ 1.99
MRPL40-201ENST00000333130 SHANK3Q9BYB0 1731 aa27.49■■□□□ 1.99
MRPL40-201ENST00000333130 UPF1Q92900 1129 aaKnown RBP eCLIP27.48■■□□□ 1.99
MRPL40-201ENST00000333130 U2SURPO15042 1029 aaKnown RBP27.48■■□□□ 1.99
MRPL40-201ENST00000333130 SULT6B1Q6IMI4 303 aa27.48■■□□□ 1.99
MRPL40-201ENST00000333130 SPG7Q9UQ90 795 aa27.48■■□□□ 1.99
MRPL40-201ENST00000333130 PCDH11XQ9BZA7 1347 aa27.47■■□□□ 1.99
MRPL40-201ENST00000333130 PCDH11YQ9BZA8 1340 aa27.47■■□□□ 1.99
MRPL40-201ENST00000333130 SBF2Q86WG5 1849 aa27.47■■□□□ 1.99
MRPL40-201ENST00000333130 DIEXFQ68CQ4 756 aaKnown RBP27.47■■□□□ 1.99
MRPL40-201ENST00000333130 MARCH10Q8NA82 808 aaPredicted RBP27.47■■□□□ 1.99
MRPL40-201ENST00000333130 DDX54Q8TDD1 881 aaKnown RBP27.47■■□□□ 1.99
MRPL40-201ENST00000333130 KDRP35968 1356 aa27.46■■□□□ 1.99
MRPL40-201ENST00000333130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.45■■□□□ 1.98
MRPL40-201ENST00000333130 BCL9O00512 1426 aa27.45■■□□□ 1.98
MRPL40-201ENST00000333130 AEBP1Q8IUX7 1158 aa27.42■■□□□ 1.98
MRPL40-201ENST00000333130 AMOTQ4VCS5 1084 aa27.41■■□□□ 1.98
MRPL40-201ENST00000333130 PLEKHO1Q53GL0 409 aaPredicted RBP27.41■■□□□ 1.98
MRPL40-201ENST00000333130 TNS1Q9HBL0 1735 aaKnown RBP27.41■■□□□ 1.98
MRPL40-201ENST00000333130 HMOX1P09601 288 aa27.4■■□□□ 1.98
MRPL40-201ENST00000333130 NHSQ6T4R5 1651 aa27.39■■□□□ 1.97
MRPL40-201ENST00000333130 TRIM37O94972 964 aa27.38■■□□□ 1.97
MRPL40-201ENST00000333130 DOT1LQ8TEK3 1739 aa27.37■■□□□ 1.97
MRPL40-201ENST00000333130 U2AF1L5P0DN76 240 aaPredicted RBP27.37■■□□□ 1.97
MRPL40-201ENST00000333130 U2AF1Q01081 240 aaKnown RBP eCLIP27.37■■□□□ 1.97
MRPL40-201ENST00000333130 BAG6P46379 1132 aa27.35■■□□□ 1.97
MRPL40-201ENST00000333130 IFNL2Q8IZJ0 200 aa27.35■■□□□ 1.97
MRPL40-201ENST00000333130 C1orf141Q5JVX7 400 aa27.34■■□□□ 1.97
MRPL40-201ENST00000333130 ZNF530Q6P9A1 599 aaPredicted RBP27.33■■□□□ 1.97
MRPL40-201ENST00000333130 BCL11BQ9C0K0 894 aaPredicted RBP27.33■■□□□ 1.97
MRPL40-201ENST00000333130 CYP27B1O15528 508 aa27.32■■□□□ 1.96
MRPL40-201ENST00000333130 NEFMP07197 916 aa27.32■■□□□ 1.96
MRPL40-201ENST00000333130 HSP90AB1P08238 724 aaKnown RBP27.32■■□□□ 1.96
MRPL40-201ENST00000333130 CCDC184Q52MB2 194 aa27.31■■□□□ 1.96
MRPL40-201ENST00000333130 ACSBG1Q96GR2 724 aa27.31■■□□□ 1.96
MRPL40-201ENST00000333130 PNNQ9H307 717 aaKnown RBP27.31■■□□□ 1.96
MRPL40-201ENST00000333130 FCHSD2O94868 740 aa27.3■■□□□ 1.96
MRPL40-201ENST00000333130 APBA3O96018 575 aa27.3■■□□□ 1.96
MRPL40-201ENST00000333130 PHKG2P15735 406 aa27.3■■□□□ 1.96
MRPL40-201ENST00000333130 BTAF1O14981 1849 aa27.29■■□□□ 1.96
MRPL40-201ENST00000333130 SYTL4Q96C24 671 aaPredicted RBP27.29■■□□□ 1.96
MRPL40-201ENST00000333130 RGPD3A6NKT7 1758 aaPredicted RBP27.29■■□□□ 1.96
MRPL40-201ENST00000333130 RGPD4Q7Z3J3 1758 aa27.29■■□□□ 1.96
MRPL40-201ENST00000333130 PRKAR2BP31323 418 aa27.28■■□□□ 1.96
MRPL40-201ENST00000333130 WDR43Q15061 677 aaKnown RBP eCLIP27.28■■□□□ 1.96
MRPL40-201ENST00000333130 RSPH6AQ9H0K4 717 aa27.28■■□□□ 1.96
MRPL40-201ENST00000333130 ITGB4P16144 1822 aa27.27■■□□□ 1.96
MRPL40-201ENST00000333130 NKX1-1Q15270 411 aaPredicted RBP27.26■■□□□ 1.95
MRPL40-201ENST00000333130 GAS2L2Q8NHY3 880 aa27.26■■□□□ 1.95
MRPL40-201ENST00000333130 TOGARAM1Q9Y4F4 1720 aa27.26■■□□□ 1.95
MRPL40-201ENST00000333130 VIRMAQ69YN4 1812 aaKnown RBP27.25■■□□□ 1.95
MRPL40-201ENST00000333130 DCAF5Q96JK2 942 aa27.24■■□□□ 1.95
MRPL40-201ENST00000333130 MRS2Q9HD23 443 aa27.24■■□□□ 1.95
MRPL40-201ENST00000333130 KCNQ2O43526 872 aa27.23■■□□□ 1.95
MRPL40-201ENST00000333130 PRIM1P49642 420 aaKnown RBP27.23■■□□□ 1.95
MRPL40-201ENST00000333130 AKAP4Q5JQC9 854 aa27.23■■□□□ 1.95
MRPL40-201ENST00000333130 CCER2I3L3R5 266 aa27.22■■□□□ 1.95
MRPL40-201ENST00000333130 DEFB132Q7Z7B7 95 aa27.22■■□□□ 1.95
MRPL40-201ENST00000333130 SCN11AQ9UI33 1791 aa27.22■■□□□ 1.95
MRPL40-201ENST00000333130 MIER1Q8N108 512 aa27.22■■□□□ 1.95
MRPL40-201ENST00000333130 MAPK8IP3Q9UPT6 1336 aa27.21■■□□□ 1.95
MRPL40-201ENST00000333130 MTHFSDQ2M296 383 aaKnown RBP27.21■■□□□ 1.95
MRPL40-201ENST00000333130 EN1Q05925 392 aaPredicted RBP27.2■■□□□ 1.94
MRPL40-201ENST00000333130 PLSCR1O15162 318 aa27.19■■□□□ 1.94
MRPL40-201ENST00000333130 PNISRQ8TF01 805 aaKnown RBP27.19■■□□□ 1.94
MRPL40-201ENST00000333130 ERVV-2B6SEH9 535 aa27.18■■□□□ 1.94
MRPL40-201ENST00000333130 TMOD3Q9NYL9 352 aa27.18■■□□□ 1.94
MRPL40-201ENST00000333130 RREB1Q92766 1687 aa27.17■■□□□ 1.94
MRPL40-201ENST00000333130 MAP3K5Q99683 1374 aa27.17■■□□□ 1.94
MRPL40-201ENST00000333130 MPRIPQ6WCQ1 1025 aa27.17■■□□□ 1.94
MRPL40-201ENST00000333130 PTF1AQ7RTS3 328 aa27.17■■□□□ 1.94
MRPL40-201ENST00000333130 KDM6AO15550 1401 aaPredicted RBP27.16■■□□□ 1.94
MRPL40-201ENST00000333130 PLEKHF1Q96S99 279 aa27.16■■□□□ 1.94
MRPL40-201ENST00000333130 ADAMTS8Q9UP79 889 aa27.16■■□□□ 1.94
MRPL40-201ENST00000333130 GNAT3A8MTJ3 354 aa27.15■■□□□ 1.94
MRPL40-201ENST00000333130 PHACTR3Q96KR7 559 aa27.15■■□□□ 1.94
MRPL40-201ENST00000333130 DLG5Q8TDM6 1919 aa27.15■■□□□ 1.94
MRPL40-201ENST00000333130 EZH2Q15910 746 aaKnown RBP27.14■■□□□ 1.94
MRPL40-201ENST00000333130 CAMKK2Q96RR4 588 aa27.14■■□□□ 1.94
MRPL40-201ENST00000333130 CABP4P57796 275 aa27.13■■□□□ 1.93
MRPL40-201ENST00000333130 ADAMTS7Q9UKP4 1686 aa27.13■■□□□ 1.93
MRPL40-201ENST00000333130 RTF1Q92541 710 aaKnown RBP27.12■■□□□ 1.93
MRPL40-201ENST00000333130 LY75O60449 1722 aa27.12■■□□□ 1.93
MRPL40-201ENST00000333130 NUP188Q5SRE5 1749 aa27.11■■□□□ 1.93
MRPL40-201ENST00000333130 SMARCC1Q92922 1105 aaPredicted RBP27.11■■□□□ 1.93
MRPL40-201ENST00000333130 RNMTO43148 476 aaKnown RBP27.09■■□□□ 1.93
MRPL40-201ENST00000333130 PIGBQ92521 554 aa27.09■■□□□ 1.93
MRPL40-201ENST00000333130 MRC1P22897 1456 aa27.08■■□□□ 1.93
MRPL40-201ENST00000333130 HMGB2P26583 209 aaKnown RBP27.08■■□□□ 1.93
MRPL40-201ENST00000333130 RUNDC1Q96C34 613 aa27.08■■□□□ 1.93
MRPL40-201ENST00000333130 PALLDQ8WX93 1383 aa27.07■■□□□ 1.92
MRPL40-201ENST00000333130 HTATSF1O43719 755 aaKnown RBP27.07■■□□□ 1.92
MRPL40-201ENST00000333130 TEFQ10587 303 aa27.07■■□□□ 1.92
MRPL40-201ENST00000333130 NFE2L2Q16236 605 aa27.07■■□□□ 1.92
MRPL40-201ENST00000333130 TXNRD1Q16881 649 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms