RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 MARCH10Q8NA82 808 aaPredicted RBP28.2■■■□□ 2.1
YBX1-202ENST00000332220 CFAP53Q96M91 514 aa28.2■■■□□ 2.1
YBX1-202ENST00000332220 TNS1Q9HBL0 1735 aaKnown RBP28.19■■■□□ 2.1
YBX1-202ENST00000332220 MYBBP1AQ9BQG0 1328 aaKnown RBP28.18■■■□□ 2.1
YBX1-202ENST00000332220 KDRP35968 1356 aa28.17■■■□□ 2.1
YBX1-202ENST00000332220 VIRMAQ69YN4 1812 aaKnown RBP28.17■■■□□ 2.1
YBX1-202ENST00000332220 SULT6B1Q6IMI4 303 aa28.16■■■□□ 2.1
YBX1-202ENST00000332220 DOT1LQ8TEK3 1739 aa28.15■■■□□ 2.1
YBX1-202ENST00000332220 ZCRB1Q8TBF4 217 aaKnown RBP28.15■■■□□ 2.1
YBX1-202ENST00000332220 UPF1Q92900 1129 aaKnown RBP eCLIP28.15■■■□□ 2.1
YBX1-202ENST00000332220 U2SURPO15042 1029 aaKnown RBP28.13■■■□□ 2.09
YBX1-202ENST00000332220 HMOX1P09601 288 aa28.13■■■□□ 2.09
YBX1-202ENST00000332220 FAM196AQ6ZSG2 479 aa28.12■■■□□ 2.09
YBX1-202ENST00000332220 NHSQ6T4R5 1651 aa28.11■■■□□ 2.09
YBX1-202ENST00000332220 DDX54Q8TDD1 881 aaKnown RBP28.11■■■□□ 2.09
YBX1-202ENST00000332220 ITGB4P16144 1822 aa28.11■■■□□ 2.09
YBX1-202ENST00000332220 TOGARAM1Q9Y4F4 1720 aa28.1■■■□□ 2.09
YBX1-202ENST00000332220 BCL9O00512 1426 aa28.09■■■□□ 2.09
YBX1-202ENST00000332220 PLEKHG2Q9H7P9 1386 aa28.09■■■□□ 2.09
YBX1-202ENST00000332220 BTAF1O14981 1849 aa28.07■■■□□ 2.08
YBX1-202ENST00000332220 NUDCQ9Y266 331 aa28.07■■■□□ 2.08
YBX1-202ENST00000332220 PCDH11XQ9BZA7 1347 aa28.07■■■□□ 2.08
YBX1-202ENST00000332220 PCDH11YQ9BZA8 1340 aa28.07■■■□□ 2.08
YBX1-202ENST00000332220 CYP27B1O15528 508 aa28.06■■■□□ 2.08
YBX1-202ENST00000332220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.06■■■□□ 2.081e-13■■□□□ 11.9
YBX1-202ENST00000332220 SPG7Q9UQ90 795 aa28.06■■■□□ 2.08
YBX1-202ENST00000332220 ANP32CO43423 234 aa28.04■■■□□ 2.08
YBX1-202ENST00000332220 TRIM37O94972 964 aa28.04■■■□□ 2.08
YBX1-202ENST00000332220 U2AF1L5P0DN76 240 aaPredicted RBP28.03■■■□□ 2.08
YBX1-202ENST00000332220 U2AF1Q01081 240 aaKnown RBP eCLIP28.03■■■□□ 2.08
YBX1-202ENST00000332220 SCN11AQ9UI33 1791 aa28.03■■■□□ 2.08
YBX1-202ENST00000332220 DLG5Q8TDM6 1919 aa28.02■■■□□ 2.08
YBX1-202ENST00000332220 PLEKHO1Q53GL0 409 aaPredicted RBP28.01■■■□□ 2.07
YBX1-202ENST00000332220 PTF1AQ7RTS3 328 aa28.01■■■□□ 2.07
YBX1-202ENST00000332220 RSPH6AQ9H0K4 717 aa28.01■■■□□ 2.07
YBX1-202ENST00000332220 ACSBG1Q96GR2 724 aa28■■■□□ 2.07
YBX1-202ENST00000332220 AMOTQ4VCS5 1084 aa27.99■■■□□ 2.07
YBX1-202ENST00000332220 CCDC125Q86Z20 511 aa27.99■■■□□ 2.07
YBX1-202ENST00000332220 PHKG2P15735 406 aa27.98■■■□□ 2.07
YBX1-202ENST00000332220 ZNF530Q6P9A1 599 aaPredicted RBP27.98■■■□□ 2.07
YBX1-202ENST00000332220 RGPD3A6NKT7 1758 aaPredicted RBP27.97■■■□□ 2.07
YBX1-202ENST00000332220 RGPD4Q7Z3J3 1758 aa27.97■■■□□ 2.07
YBX1-202ENST00000332220 KCNQ2O43526 872 aa27.97■■■□□ 2.07
YBX1-202ENST00000332220 PRKAR2BP31323 418 aa27.97■■■□□ 2.07
YBX1-202ENST00000332220 CCDC184Q52MB2 194 aa27.97■■■□□ 2.07
YBX1-202ENST00000332220 IFNL2Q8IZJ0 200 aa27.97■■■□□ 2.07
YBX1-202ENST00000332220 FCHSD2O94868 740 aa27.95■■■□□ 2.06
YBX1-202ENST00000332220 NKX1-1Q15270 411 aaPredicted RBP27.95■■■□□ 2.06
YBX1-202ENST00000332220 SF3B2Q13435 895 aaKnown RBP27.94■■■□□ 2.06
YBX1-202ENST00000332220 MTHFSDQ2M296 383 aaKnown RBP27.94■■■□□ 2.06
YBX1-202ENST00000332220 DEFB132Q7Z7B7 95 aa27.94■■■□□ 2.06
YBX1-202ENST00000332220 BCL11BQ9C0K0 894 aaPredicted RBP27.94■■■□□ 2.06
YBX1-202ENST00000332220 ADAMTS7Q9UKP4 1686 aa27.94■■■□□ 2.06
YBX1-202ENST00000332220 PHACTR3Q96KR7 559 aa27.93■■■□□ 2.06
YBX1-202ENST00000332220 RREB1Q92766 1687 aa27.93■■■□□ 2.06
YBX1-202ENST00000332220 KDM6AO15550 1401 aaPredicted RBP27.92■■■□□ 2.06
YBX1-202ENST00000332220 PRIM1P49642 420 aaKnown RBP27.91■■■□□ 2.06
YBX1-202ENST00000332220 APBA3O96018 575 aa27.9■■■□□ 2.06
YBX1-202ENST00000332220 C1orf141Q5JVX7 400 aa27.9■■■□□ 2.06
YBX1-202ENST00000332220 LY75O60449 1722 aa27.89■■■□□ 2.05
YBX1-202ENST00000332220 BAG6P46379 1132 aa27.88■■■□□ 2.05
YBX1-202ENST00000332220 NUP188Q5SRE5 1749 aa27.88■■■□□ 2.05
YBX1-202ENST00000332220 SYTL4Q96C24 671 aaPredicted RBP27.88■■■□□ 2.05
YBX1-202ENST00000332220 EN1Q05925 392 aaPredicted RBP27.87■■■□□ 2.05
YBX1-202ENST00000332220 AKAP4Q5JQC9 854 aa27.87■■■□□ 2.05
YBX1-202ENST00000332220 PLEKHF1Q96S99 279 aa27.87■■■□□ 2.05
YBX1-202ENST00000332220 SIPA1L3O60292 1781 aaPredicted RBP27.86■■■□□ 2.05
YBX1-202ENST00000332220 WDR43Q15061 677 aaKnown RBP eCLIP27.86■■■□□ 2.05
YBX1-202ENST00000332220 HSP90AB1P08238 724 aaKnown RBP27.85■■■□□ 2.05
YBX1-202ENST00000332220 MPRIPQ6WCQ1 1025 aa27.85■■■□□ 2.05
YBX1-202ENST00000332220 GAS2L2Q8NHY3 880 aa27.85■■■□□ 2.05
YBX1-202ENST00000332220 DCAF5Q96JK2 942 aa27.85■■■□□ 2.05
YBX1-202ENST00000332220 MRS2Q9HD23 443 aa27.84■■■□□ 2.05
YBX1-202ENST00000332220 CAMKK2Q96RR4 588 aa27.83■■■□□ 2.05
YBX1-202ENST00000332220 ADAMTS8Q9UP79 889 aa27.83■■■□□ 2.05
YBX1-202ENST00000332220 MAP3K5Q99683 1374 aa27.83■■■□□ 2.05
YBX1-202ENST00000332220 EZH2Q15910 746 aaKnown RBP27.82■■■□□ 2.04
YBX1-202ENST00000332220 DIEXFQ68CQ4 756 aaKnown RBP27.82■■■□□ 2.04
YBX1-202ENST00000332220 LGR6Q9HBX8 967 aa27.81■■■□□ 2.04
YBX1-202ENST00000332220 PLSCR1O15162 318 aa27.8■■■□□ 2.04
YBX1-202ENST00000332220 PNNQ9H307 717 aaKnown RBP27.8■■■□□ 2.04
YBX1-202ENST00000332220 MRC1P22897 1456 aa27.8■■■□□ 2.04
YBX1-202ENST00000332220 TAF1LQ8IZX4 1826 aa27.79■■■□□ 2.04
YBX1-202ENST00000332220 ERVV-2B6SEH9 535 aa27.79■■■□□ 2.04
YBX1-202ENST00000332220 CCDC146Q8IYE0 955 aa27.79■■■□□ 2.04
YBX1-202ENST00000332220 PIGBQ92521 554 aa27.79■■■□□ 2.04
YBX1-202ENST00000332220 GNAT3A8MTJ3 354 aa27.78■■■□□ 2.04
YBX1-202ENST00000332220 RNMTO43148 476 aaKnown RBP27.78■■■□□ 2.04
YBX1-202ENST00000332220 PAPPAQ13219 1627 aa27.78■■■□□ 2.04
YBX1-202ENST00000332220 MAPK8IP3Q9UPT6 1336 aa27.77■■■□□ 2.04
YBX1-202ENST00000332220 NEFMP07197 916 aa27.77■■■□□ 2.04
YBX1-202ENST00000332220 PNISRQ8TF01 805 aaKnown RBP27.77■■■□□ 2.04
YBX1-202ENST00000332220 TMOD3Q9NYL9 352 aa27.77■■■□□ 2.04
YBX1-202ENST00000332220 NFE2L2Q16236 605 aa27.75■■■□□ 2.03
YBX1-202ENST00000332220 PROM2Q8N271 834 aa27.75■■■□□ 2.03
YBX1-202ENST00000332220 IL17REQ8NFR9 667 aa27.75■■■□□ 2.03
YBX1-202ENST00000332220 CABP4P57796 275 aa27.74■■■□□ 2.03
YBX1-202ENST00000332220 RUNDC1Q96C34 613 aa27.73■■■□□ 2.03
YBX1-202ENST00000332220 TXNRD1Q16881 649 aa27.72■■■□□ 2.03
YBX1-202ENST00000332220 NFATC2IPQ8NCF5 419 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms