RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ARHGEF25Q86VW2 580 aa20.08■□□□□ 0.81
PDGFB-201ENST00000331163 KCNQ3O43525 872 aa20.07■□□□□ 0.8
PDGFB-201ENST00000331163 NFATC2IPQ8NCF5 419 aa20.07■□□□□ 0.8
PDGFB-201ENST00000331163 FAM177BA6PVY3 158 aa20.07■□□□□ 0.8
PDGFB-201ENST00000331163 SBNO1A3KN83 1393 aa20.07■□□□□ 0.8
PDGFB-201ENST00000331163 RLBP1P12271 317 aa20.06■□□□□ 0.8
PDGFB-201ENST00000331163 SLIT1O75093 1534 aa20.06■□□□□ 0.8
PDGFB-201ENST00000331163 KIAA1210Q9ULL0 1709 aa20.06■□□□□ 0.8
PDGFB-201ENST00000331163 C1orf167Q5SNV9 1468 aa20.06■□□□□ 0.8
PDGFB-201ENST00000331163 LAMC1P11047 1609 aa20.06■□□□□ 0.8
PDGFB-201ENST00000331163 DIP2AQ14689 1571 aa20.05■□□□□ 0.8
PDGFB-201ENST00000331163 TECPR2O15040 1411 aa20.04■□□□□ 0.8
PDGFB-201ENST00000331163 IFT172Q9UG01 1749 aa20.04■□□□□ 0.8
PDGFB-201ENST00000331163 SLC4A3P48751 1232 aa20.04■□□□□ 0.8
PDGFB-201ENST00000331163 SPG7Q9UQ90 795 aa20.04■□□□□ 0.8
PDGFB-201ENST00000331163 PTCH1Q13635 1447 aa20.04■□□□□ 0.8
PDGFB-201ENST00000331163 TMEM57Q8N5G2 664 aa20.04■□□□□ 0.8
PDGFB-201ENST00000331163 CFAP44Q96MT7 982 aa20.04■□□□□ 0.8
PDGFB-201ENST00000331163 CHMP3Q9Y3E7 222 aa20.04■□□□□ 0.8
PDGFB-201ENST00000331163 JARID2Q92833 1246 aaPredicted RBP20.03■□□□□ 0.8
PDGFB-201ENST00000331163 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
PDGFB-201ENST00000331163 DAXXQ9UER7 740 aaPredicted RBP20.02■□□□□ 0.8
PDGFB-201ENST00000331163 IL17REQ8NFR9 667 aa20.02■□□□□ 0.8
PDGFB-201ENST00000331163 TRIM27P14373 513 aa20.01■□□□□ 0.79
PDGFB-201ENST00000331163 OS9Q13438 667 aaPredicted RBP20■□□□□ 0.79
PDGFB-201ENST00000331163 ATF7IPQ6VMQ6 1270 aa20■□□□□ 0.79
PDGFB-201ENST00000331163 SPATA31A3Q5VYP0 1347 aa19.99■□□□□ 0.79
PDGFB-201ENST00000331163 NPHP1O15259 732 aa19.99■□□□□ 0.79
PDGFB-201ENST00000331163 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.99■□□□□ 0.79
PDGFB-201ENST00000331163 IFT57Q9NWB7 429 aa19.99■□□□□ 0.79
PDGFB-201ENST00000331163 DLC1Q96QB1 1528 aa19.99■□□□□ 0.79
PDGFB-201ENST00000331163 BRPF3Q9ULD4 1205 aa19.98■□□□□ 0.79
PDGFB-201ENST00000331163 NRXN3Q9Y4C0 1643 aa19.98■□□□□ 0.79
PDGFB-201ENST00000331163 PRAMEF22A3QJZ6 481 aa19.97■□□□□ 0.79
PDGFB-201ENST00000331163 NEURL4Q96JN8 1562 aa19.97■□□□□ 0.79
PDGFB-201ENST00000331163 G2E3Q7L622 706 aa19.97■□□□□ 0.79
PDGFB-201ENST00000331163 FAM98CQ17RN3 349 aaKnown RBP19.97■□□□□ 0.79
PDGFB-201ENST00000331163 ZCRB1Q8TBF4 217 aaKnown RBP19.97■□□□□ 0.79
PDGFB-201ENST00000331163 BLMP54132 1417 aaPredicted RBP19.97■□□□□ 0.79
PDGFB-201ENST00000331163 PDE4AP27815 886 aa19.96■□□□□ 0.79
PDGFB-201ENST00000331163 VAMP4O75379 141 aa19.95■□□□□ 0.78
PDGFB-201ENST00000331163 LNPKQ9C0E8 428 aa19.95■□□□□ 0.78
PDGFB-201ENST00000331163 ERBB3P21860 1342 aa19.95■□□□□ 0.78
PDGFB-201ENST00000331163 KCNQ4P56696 695 aa19.95■□□□□ 0.78
PDGFB-201ENST00000331163 IFNL2Q8IZJ0 200 aa19.95■□□□□ 0.78
PDGFB-201ENST00000331163 CCDC85AQ96PX6 553 aaPredicted RBP19.95■□□□□ 0.78
PDGFB-201ENST00000331163 MED14O60244 1454 aa19.95■□□□□ 0.78
PDGFB-201ENST00000331163 EXOC5O00471 708 aa19.95■□□□□ 0.78
PDGFB-201ENST00000331163 MS4A1P11836 297 aa19.94■□□□□ 0.78
PDGFB-201ENST00000331163 ANKRD45Q5TZF3 282 aa19.94■□□□□ 0.78
PDGFB-201ENST00000331163 RIC3Q7Z5B4 369 aa19.94■□□□□ 0.78
PDGFB-201ENST00000331163 ADAMTSL3P82987 1691 aa19.94■□□□□ 0.78
PDGFB-201ENST00000331163 AMOTQ4VCS5 1084 aa19.93■□□□□ 0.78
PDGFB-201ENST00000331163 PHAXQ9H814 394 aaKnown RBP19.93■□□□□ 0.78
PDGFB-201ENST00000331163 KIF16BQ96L93 1317 aa19.93■□□□□ 0.78
PDGFB-201ENST00000331163 CCDC30Q5VVM6 783 aa19.93■□□□□ 0.78
PDGFB-201ENST00000331163 INSRP06213 1382 aa19.93■□□□□ 0.78
PDGFB-201ENST00000331163 MYOM1P52179 1685 aa19.92■□□□□ 0.78
PDGFB-201ENST00000331163 AATKQ6ZMQ8 1374 aa19.92■□□□□ 0.78
PDGFB-201ENST00000331163 IL2RBP14784 551 aa19.92■□□□□ 0.78
PDGFB-201ENST00000331163 C9orf78Q9NZ63 289 aaPredicted RBP19.92■□□□□ 0.78
PDGFB-201ENST00000331163 CHPF2Q9P2E5 772 aa19.92■□□□□ 0.78
PDGFB-201ENST00000331163 ANKARQ7Z5J8 1434 aa19.92■□□□□ 0.78
PDGFB-201ENST00000331163 ZNF521Q96K83 1311 aa19.91■□□□□ 0.78
PDGFB-201ENST00000331163 IGSF1Q8N6C5 1336 aa19.91■□□□□ 0.78
PDGFB-201ENST00000331163 RWDD1Q9H446 243 aaPredicted RBP19.91■□□□□ 0.78
PDGFB-201ENST00000331163 POLR1AO95602 1720 aaPredicted RBP19.91■□□□□ 0.78
PDGFB-201ENST00000331163 CDC42BPGQ6DT37 1551 aa19.9■□□□□ 0.78
PDGFB-201ENST00000331163 TMOD3Q9NYL9 352 aa19.9■□□□□ 0.78
PDGFB-201ENST00000331163 DDX19BQ9UMR2 479 aa19.9■□□□□ 0.78
PDGFB-201ENST00000331163 RNMTO43148 476 aaKnown RBP19.89■□□□□ 0.78
PDGFB-201ENST00000331163 CCDC27Q2M243 656 aa19.89■□□□□ 0.78
PDGFB-201ENST00000331163 AKAP4Q5JQC9 854 aa19.89■□□□□ 0.78
PDGFB-201ENST00000331163 MVPQ14764 893 aaKnown RBP19.89■□□□□ 0.77
PDGFB-201ENST00000331163 API5Q9BZZ5 524 aaKnown RBP19.89■□□□□ 0.77
PDGFB-201ENST00000331163 ATP5J2-PTCD1G3V325 749 aa19.88■□□□□ 0.77
PDGFB-201ENST00000331163 MAP3K5Q99683 1374 aa19.88■□□□□ 0.77
PDGFB-201ENST00000331163 IGHDP01880 384 aa19.88■□□□□ 0.77
PDGFB-201ENST00000331163 OVOS2A0A0J9YW53 1432 aa19.88■□□□□ 0.77
PDGFB-201ENST00000331163 OVOS2Q6IE36 1432 aa19.88■□□□□ 0.77
PDGFB-201ENST00000331163 ARHGEF10O15013 1369 aa19.88■□□□□ 0.77
PDGFB-201ENST00000331163 ZBTB3Q9H5J0 574 aa19.88■□□□□ 0.77
PDGFB-201ENST00000331163 RGPD8O14715 1765 aaPredicted RBP19.87■□□□□ 0.77
PDGFB-201ENST00000331163 PCDHB15Q9Y5E8 787 aa19.87■□□□□ 0.77
PDGFB-201ENST00000331163 PI4KAP2A4QPH2 592 aa19.87■□□□□ 0.77
PDGFB-201ENST00000331163 PI4KAP1Q8N8J0 262 aa19.87■□□□□ 0.77
PDGFB-201ENST00000331163 MST1RQ04912 1400 aa19.87■□□□□ 0.77
PDGFB-201ENST00000331163 DDB1Q16531 1140 aa19.86■□□□□ 0.77
PDGFB-201ENST00000331163 FLIIQ13045 1269 aa19.86■□□□□ 0.77
PDGFB-201ENST00000331163 CHL1O00533 1208 aa19.85■□□□□ 0.77
PDGFB-201ENST00000331163 ZNF496Q96IT1 587 aaPredicted RBP19.85■□□□□ 0.77
PDGFB-201ENST00000331163 MAP2P11137 1827 aaKnown RBP19.85■□□□□ 0.77
PDGFB-201ENST00000331163 PNPLA6Q8IY17 1366 aa19.85■□□□□ 0.77
PDGFB-201ENST00000331163 PRIM1P49642 420 aaKnown RBP19.84■□□□□ 0.77
PDGFB-201ENST00000331163 PDE3AQ14432 1141 aa19.84■□□□□ 0.77
PDGFB-201ENST00000331163 CYP27B1O15528 508 aa19.84■□□□□ 0.77
PDGFB-201ENST00000331163 MEIS3Q99687 375 aa19.83■□□□□ 0.77
PDGFB-201ENST00000331163 SIL1Q9H173 461 aa19.83■□□□□ 0.77
PDGFB-201ENST00000331163 BICDL1Q6ZP65 573 aa19.83■□□□□ 0.76
PDGFB-201ENST00000331163 HSPA1LP34931 641 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms