RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PTPRMP28827 1452 aa17.72■□□□□ 0.43
SNX20-202ENST00000330943 SYCE3A1L190 88 aa17.72■□□□□ 0.43
SNX20-202ENST00000330943 CASC1Q6TDU7 716 aa17.72■□□□□ 0.43
SNX20-202ENST00000330943 PIK3C2BO00750 1634 aa17.72■□□□□ 0.43
SNX20-202ENST00000330943 UQCRHLA0A096LP55 91 aa17.71■□□□□ 0.43
SNX20-202ENST00000330943 UQCRHP07919 91 aa17.71■□□□□ 0.43
SNX20-202ENST00000330943 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
SNX20-202ENST00000330943 TMEM63CQ9P1W3 806 aa17.71■□□□□ 0.43
SNX20-202ENST00000330943 ZKSCAN5Q9Y2L8 839 aa17.71■□□□□ 0.43
SNX20-202ENST00000330943 SMARCA5O60264 1052 aaPredicted RBP17.71■□□□□ 0.43
SNX20-202ENST00000330943 LRSAM1Q6UWE0 723 aa17.7■□□□□ 0.42
SNX20-202ENST00000330943 CDK19Q9BWU1 502 aa17.7■□□□□ 0.42
SNX20-202ENST00000330943 NSFL1CQ9UNZ2 370 aaKnown RBP17.7■□□□□ 0.42
SNX20-202ENST00000330943 YTHDC2Q9H6S0 1430 aaKnown RBP17.69■□□□□ 0.42
SNX20-202ENST00000330943 WAPLQ7Z5K2 1190 aa17.69■□□□□ 0.42
SNX20-202ENST00000330943 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
SNX20-202ENST00000330943 FAM83GA6ND36 823 aa17.68■□□□□ 0.42
SNX20-202ENST00000330943 ANKRD44Q8N8A2 993 aa17.68■□□□□ 0.42
SNX20-202ENST00000330943 RNF214Q8ND24 703 aa17.68■□□□□ 0.42
SNX20-202ENST00000330943 CLTCQ00610 1675 aaKnown RBP17.68■□□□□ 0.42
SNX20-202ENST00000330943 NUTM2FA1L443 756 aa17.68■□□□□ 0.42
SNX20-202ENST00000330943 REC8O95072 547 aa17.68■□□□□ 0.42
SNX20-202ENST00000330943 ATP10DQ9P241 1426 aa17.67■□□□□ 0.42
SNX20-202ENST00000330943 DCTN1Q14203 1278 aa17.67■□□□□ 0.42
SNX20-202ENST00000330943 MLH3Q9UHC1 1453 aa17.67■□□□□ 0.42
SNX20-202ENST00000330943 MAP7D2Q96T17 732 aa17.67■□□□□ 0.42
SNX20-202ENST00000330943 CCDC39Q9UFE4 941 aa17.67■□□□□ 0.42
SNX20-202ENST00000330943 KIF24Q5T7B8 1368 aa17.66■□□□□ 0.42
SNX20-202ENST00000330943 CSPP1Q1MSJ5 1256 aa17.66■□□□□ 0.42
SNX20-202ENST00000330943 ARID3AQ99856 593 aa17.66■□□□□ 0.42
SNX20-202ENST00000330943 CEP85Q6P2H3 762 aa17.66■□□□□ 0.42
SNX20-202ENST00000330943 MAP2P11137 1827 aaKnown RBP17.65■□□□□ 0.42
SNX20-202ENST00000330943 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
SNX20-202ENST00000330943 LMOD3Q0VAK6 560 aa17.65■□□□□ 0.42
SNX20-202ENST00000330943 ERC2O15083 957 aa17.65■□□□□ 0.42
SNX20-202ENST00000330943 MCM5P33992 734 aa17.65■□□□□ 0.42
SNX20-202ENST00000330943 IL13P35225 146 aa17.65■□□□□ 0.42
SNX20-202ENST00000330943 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
SNX20-202ENST00000330943 NEK4P51957 841 aa17.64■□□□□ 0.41
SNX20-202ENST00000330943 DLG5Q8TDM6 1919 aa17.63■□□□□ 0.41
SNX20-202ENST00000330943 NCKAP5LQ9HCH0 1330 aa17.63■□□□□ 0.41
SNX20-202ENST00000330943 MBD3O95983 291 aa17.63■□□□□ 0.41
SNX20-202ENST00000330943 MSH6P52701 1360 aa17.63■□□□□ 0.41
SNX20-202ENST00000330943 PTMAP06454 111 aaKnown RBP17.63■□□□□ 0.41
SNX20-202ENST00000330943 KRT24Q2M2I5 525 aa17.63■□□□□ 0.41
SNX20-202ENST00000330943 MYO5BQ9ULV0 1848 aa17.63■□□□□ 0.41
SNX20-202ENST00000330943 TMX3Q96JJ7 454 aa17.62■□□□□ 0.41
SNX20-202ENST00000330943 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
SNX20-202ENST00000330943 MEIS3Q99687 375 aa17.62■□□□□ 0.41
SNX20-202ENST00000330943 DYNC1I1O14576 645 aa17.61■□□□□ 0.41
SNX20-202ENST00000330943 RTL1A6NKG5 1358 aa17.61■□□□□ 0.41
SNX20-202ENST00000330943 SASS6Q6UVJ0 657 aa17.61■□□□□ 0.41
SNX20-202ENST00000330943 NOL8Q76FK4 1167 aaKnown RBP17.61■□□□□ 0.41
SNX20-202ENST00000330943 ZBTB7CA1YPR0 619 aa17.61■□□□□ 0.41
SNX20-202ENST00000330943 DIP2CQ9Y2E4 1556 aa17.6■□□□□ 0.41
SNX20-202ENST00000330943 RGS12O14924 1447 aa17.6■□□□□ 0.41
SNX20-202ENST00000330943 TSPY26PQ9H489 355 aa17.6■□□□□ 0.41
SNX20-202ENST00000330943 FOXD4L6Q3SYB3 417 aaPredicted RBP17.59■□□□□ 0.41
SNX20-202ENST00000330943 FOXD4L3Q6VB84 417 aaPredicted RBP17.59■□□□□ 0.41
SNX20-202ENST00000330943 NME9Q86XW9 330 aa17.59■□□□□ 0.41
SNX20-202ENST00000330943 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
SNX20-202ENST00000330943 SLC52A1Q9NWF4 448 aa17.59■□□□□ 0.41
SNX20-202ENST00000330943 BRD1O95696 1058 aa17.58■□□□□ 0.41
SNX20-202ENST00000330943 RRS1Q15050 365 aaKnown RBP17.58■□□□□ 0.4
SNX20-202ENST00000330943 CDK12Q9NYV4 1490 aaPredicted RBP17.57■□□□□ 0.4
SNX20-202ENST00000330943 CEBPAP49715 358 aaPredicted RBP17.57■□□□□ 0.4
SNX20-202ENST00000330943 PDE1AP54750 535 aa17.57■□□□□ 0.4
SNX20-202ENST00000330943 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
SNX20-202ENST00000330943 TSHZ3Q63HK5 1081 aa17.57■□□□□ 0.4
SNX20-202ENST00000330943 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.57■□□□□ 0.4
SNX20-202ENST00000330943 MTERF4Q7Z6M4 381 aaKnown RBP17.57■□□□□ 0.4
SNX20-202ENST00000330943 ATP7BP35670 1465 aa17.56■□□□□ 0.4
SNX20-202ENST00000330943 MPNDQ8N594 471 aa17.56■□□□□ 0.4
SNX20-202ENST00000330943 SYAP1Q96A49 352 aaPredicted RBP17.56■□□□□ 0.4
SNX20-202ENST00000330943 CPSF1Q10570 1443 aaKnown RBP17.56■□□□□ 0.4
SNX20-202ENST00000330943 DNTTIP2Q5QJE6 756 aaKnown RBP17.56■□□□□ 0.4
SNX20-202ENST00000330943 TXNDC2Q86VQ3 553 aa17.56■□□□□ 0.4
SNX20-202ENST00000330943 ESF1Q9H501 851 aaKnown RBP17.56■□□□□ 0.4
SNX20-202ENST00000330943 GDPD2Q9HCC8 539 aa17.56■□□□□ 0.4
SNX20-202ENST00000330943 SOX12O15370 315 aa17.55■□□□□ 0.4
SNX20-202ENST00000330943 NEO1Q92859 1461 aa17.55■□□□□ 0.4
SNX20-202ENST00000330943 HMMRO75330 724 aa17.55■□□□□ 0.4
SNX20-202ENST00000330943 MCM2P49736 904 aa17.55■□□□□ 0.4
SNX20-202ENST00000330943 PRDM4Q9UKN5 801 aa17.55■□□□□ 0.4
SNX20-202ENST00000330943 PALD1Q9ULE6 856 aa17.55■□□□□ 0.4
SNX20-202ENST00000330943 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
SNX20-202ENST00000330943 HAP1P54257 671 aaPredicted RBP17.54■□□□□ 0.4
SNX20-202ENST00000330943 CUL4AQ13619 759 aa17.54■□□□□ 0.4
SNX20-202ENST00000330943 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
SNX20-202ENST00000330943 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.54■□□□□ 0.4
SNX20-202ENST00000330943 ESYT1Q9BSJ8 1104 aa17.54■□□□□ 0.4
SNX20-202ENST00000330943 PTPRCP08575 1304 aa17.53■□□□□ 0.4
SNX20-202ENST00000330943 GADD45BO75293 160 aaPredicted RBP17.53■□□□□ 0.4
SNX20-202ENST00000330943 MCCP23508 829 aa17.53■□□□□ 0.4
SNX20-202ENST00000330943 SLC4A10Q6U841 1118 aa17.53■□□□□ 0.4
SNX20-202ENST00000330943 OSBPL3Q9H4L5 887 aa17.53■□□□□ 0.4
SNX20-202ENST00000330943 MCM10Q7L590 875 aa17.53■□□□□ 0.4
SNX20-202ENST00000330943 ANO2Q9NQ90 1003 aa17.53■□□□□ 0.4
SNX20-202ENST00000330943 AEBP1Q8IUX7 1158 aa17.52■□□□□ 0.4
SNX20-202ENST00000330943 EXOC6BQ9Y2D4 811 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms