RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 RAPGEF4Q8WZA2 1011 aa25.06■■□□□ 1.6
RAB28-202ENST00000330852 MAP2P11137 1827 aaKnown RBP25.05■■□□□ 1.6
RAB28-202ENST00000330852 MEGF6O75095 1541 aa25.05■■□□□ 1.6
RAB28-202ENST00000330852 PPP1R1BQ9UD71 204 aaPredicted RBP25.04■■□□□ 1.6
RAB28-202ENST00000330852 ANKRD26Q9UPS8 1709 aa25.04■■□□□ 1.6
RAB28-202ENST00000330852 TATP17735 454 aaPredicted RBP25.02■■□□□ 1.6
RAB28-202ENST00000330852 SLC27A3Q5K4L6 730 aa25.02■■□□□ 1.6
RAB28-202ENST00000330852 DOT1LQ8TEK3 1739 aa25.02■■□□□ 1.6
RAB28-202ENST00000330852 PAPPAQ13219 1627 aa25.01■■□□□ 1.59
RAB28-202ENST00000330852 HSPA5P11021 654 aaKnown RBP25■■□□□ 1.59
RAB28-202ENST00000330852 PRIM1P49642 420 aaKnown RBP24.99■■□□□ 1.59
RAB28-202ENST00000330852 EMILIN1Q9Y6C2 1016 aa24.99■■□□□ 1.59
RAB28-202ENST00000330852 WASHC2AQ641Q2 1341 aa24.99■■□□□ 1.59
RAB28-202ENST00000330852 USHBP1Q8N6Y0 703 aa24.98■■□□□ 1.59
RAB28-202ENST00000330852 POLR3GLQ9BT43 218 aa24.98■■□□□ 1.59
RAB28-202ENST00000330852 SYTL4Q96C24 671 aaPredicted RBP24.98■■□□□ 1.59
RAB28-202ENST00000330852 PDGFDQ9GZP0 370 aaPredicted RBP24.97■■□□□ 1.59
RAB28-202ENST00000330852 LY75O60449 1722 aa24.97■■□□□ 1.59
RAB28-202ENST00000330852 PCDH11XQ9BZA7 1347 aa24.96■■□□□ 1.59
RAB28-202ENST00000330852 PCDH11YQ9BZA8 1340 aa24.96■■□□□ 1.59
RAB28-202ENST00000330852 QSER1Q2KHR3 1735 aa24.96■■□□□ 1.59
RAB28-202ENST00000330852 MTFR1LQ9H019 292 aa24.95■■□□□ 1.59
RAB28-202ENST00000330852 LRRC4BQ9NT99 713 aa24.95■■□□□ 1.59
RAB28-202ENST00000330852 NCAPD2Q15021 1401 aa24.95■■□□□ 1.58
RAB28-202ENST00000330852 ZBTB7AO95365 584 aa24.95■■□□□ 1.58
RAB28-202ENST00000330852 PPM1GO15355 546 aaPredicted RBP24.94■■□□□ 1.58
RAB28-202ENST00000330852 HMGB2P26583 209 aaKnown RBP24.94■■□□□ 1.58
RAB28-202ENST00000330852 NSD2O96028 1365 aa24.93■■□□□ 1.58
RAB28-202ENST00000330852 POLKQ9UBT6 870 aa24.93■■□□□ 1.58
RAB28-202ENST00000330852 PKD1L3Q7Z443 1732 aa24.92■■□□□ 1.58
RAB28-202ENST00000330852 DCAF8L1A6NGE4 600 aa24.92■■□□□ 1.58
RAB28-202ENST00000330852 PTGER2P43116 358 aa24.92■■□□□ 1.58
RAB28-202ENST00000330852 PANK3Q9H999 370 aa24.92■■□□□ 1.58
RAB28-202ENST00000330852 AKT1S1Q96B36 256 aa24.91■■□□□ 1.58
RAB28-202ENST00000330852 ATF5Q9Y2D1 282 aaPredicted RBP24.9■■□□□ 1.58
RAB28-202ENST00000330852 ZNF827Q17R98 1081 aa24.89■■□□□ 1.58
RAB28-202ENST00000330852 SLC16A10Q8TF71 515 aa24.89■■□□□ 1.58
RAB28-202ENST00000330852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.89■■□□□ 1.571e-6■■□□□ 13.8
RAB28-202ENST00000330852 PLEKHG2Q9H7P9 1386 aa24.88■■□□□ 1.57
RAB28-202ENST00000330852 SPG7Q9UQ90 795 aa24.88■■□□□ 1.57
RAB28-202ENST00000330852 EYA1Q99502 592 aa24.87■■□□□ 1.57
RAB28-202ENST00000330852 CYP27B1O15528 508 aa24.86■■□□□ 1.57
RAB28-202ENST00000330852 SGIP1Q9BQI5 828 aa24.86■■□□□ 1.57
RAB28-202ENST00000330852 ITGB4P16144 1822 aa24.86■■□□□ 1.57
RAB28-202ENST00000330852 NKX1-1Q15270 411 aaPredicted RBP24.85■■□□□ 1.57
RAB28-202ENST00000330852 CCNL1Q9UK58 526 aaPredicted RBP24.85■■□□□ 1.57
RAB28-202ENST00000330852 TFCP2L1Q9NZI6 479 aa24.83■■□□□ 1.57
RAB28-202ENST00000330852 TUBGCP6Q96RT7 1819 aa24.83■■□□□ 1.57
RAB28-202ENST00000330852 TNNT2P45379 298 aaPredicted RBP24.83■■□□□ 1.57
RAB28-202ENST00000330852 COL24A1Q17RW2 1714 aa24.82■■□□□ 1.56
RAB28-202ENST00000330852 EIF4A2Q14240 407 aaKnown RBP24.81■■□□□ 1.56
RAB28-202ENST00000330852 SMARCC1Q92922 1105 aaPredicted RBP24.81■■□□□ 1.56
RAB28-202ENST00000330852 KNSTRNQ9Y448 316 aa24.81■■□□□ 1.56
RAB28-202ENST00000330852 TOGARAM1Q9Y4F4 1720 aa24.81■■□□□ 1.56
RAB28-202ENST00000330852 ARXQ96QS3 562 aa24.81■■□□□ 1.56
RAB28-202ENST00000330852 PNPLA7Q6ZV29 1317 aa24.8■■□□□ 1.56
RAB28-202ENST00000330852 KCNQ4P56696 695 aa24.8■■□□□ 1.56
RAB28-202ENST00000330852 MPRIPQ6WCQ1 1025 aa24.8■■□□□ 1.56
RAB28-202ENST00000330852 TAF1LQ8IZX4 1826 aa24.79■■□□□ 1.56
RAB28-202ENST00000330852 MORC1Q86VD1 984 aa24.79■■□□□ 1.56
RAB28-202ENST00000330852 SYT17Q9BSW7 474 aa24.79■■□□□ 1.56
RAB28-202ENST00000330852 C5P01031 1676 aa24.78■■□□□ 1.56
RAB28-202ENST00000330852 MAP3K5Q99683 1374 aa24.78■■□□□ 1.56
RAB28-202ENST00000330852 FHDC1Q9C0D6 1143 aaPredicted RBP24.78■■□□□ 1.56
RAB28-202ENST00000330852 PALLDQ8WX93 1383 aa24.78■■□□□ 1.56
RAB28-202ENST00000330852 IFNL2Q8IZJ0 200 aa24.78■■□□□ 1.56
RAB28-202ENST00000330852 IGSF1Q8N6C5 1336 aa24.77■■□□□ 1.56
RAB28-202ENST00000330852 POLD1P28340 1107 aa24.76■■□□□ 1.55
RAB28-202ENST00000330852 PHKG2P15735 406 aa24.75■■□□□ 1.55
RAB28-202ENST00000330852 FLAD1Q8NFF5 587 aa24.74■■□□□ 1.55
RAB28-202ENST00000330852 PIGBQ92521 554 aa24.74■■□□□ 1.55
RAB28-202ENST00000330852 KIF7Q2M1P5 1343 aa24.73■■□□□ 1.55
RAB28-202ENST00000330852 YY1P25490 414 aa24.72■■□□□ 1.55
RAB28-202ENST00000330852 TMOD3Q9NYL9 352 aa24.72■■□□□ 1.55
RAB28-202ENST00000330852 HSP90AB1P08238 724 aaKnown RBP24.7■■□□□ 1.54
RAB28-202ENST00000330852 AMOTQ4VCS5 1084 aa24.7■■□□□ 1.54
RAB28-202ENST00000330852 PLEKHO1Q53GL0 409 aaPredicted RBP24.7■■□□□ 1.54
RAB28-202ENST00000330852 AMER1Q5JTC6 1135 aaPredicted RBP24.7■■□□□ 1.54
RAB28-202ENST00000330852 COL23A1Q86Y22 540 aaPredicted RBP24.69■■□□□ 1.54
RAB28-202ENST00000330852 C4BP0C0L5 1744 aa24.69■■□□□ 1.54
RAB28-202ENST00000330852 ERVV-2B6SEH9 535 aa24.67■■□□□ 1.54
RAB28-202ENST00000330852 MSH5O43196 834 aa24.66■■□□□ 1.54
RAB28-202ENST00000330852 DCAF5Q96JK2 942 aa24.66■■□□□ 1.54
RAB28-202ENST00000330852 CHD4Q14839 1912 aa24.66■■□□□ 1.54
RAB28-202ENST00000330852 LOC102724428A0A0B4J2F2 783 aa24.66■■□□□ 1.54
RAB28-202ENST00000330852 SIK1P57059 783 aa24.66■■□□□ 1.54
RAB28-202ENST00000330852 UBR3Q6ZT12 1888 aa24.65■■□□□ 1.54
RAB28-202ENST00000330852 PER1O15534 1290 aaPredicted RBP24.64■■□□□ 1.54
RAB28-202ENST00000330852 AK7Q96M32 723 aa24.64■■□□□ 1.54
RAB28-202ENST00000330852 KDRP35968 1356 aa24.63■■□□□ 1.53
RAB28-202ENST00000330852 ASAP1Q9ULH1 1129 aa24.63■■□□□ 1.53
RAB28-202ENST00000330852 IL13P35225 146 aa24.62■■□□□ 1.53
RAB28-202ENST00000330852 ZNF530Q6P9A1 599 aaPredicted RBP24.62■■□□□ 1.53
RAB28-202ENST00000330852 ZNF831Q5JPB2 1677 aa24.62■■□□□ 1.53
RAB28-202ENST00000330852 SULT6B1Q6IMI4 303 aa24.61■■□□□ 1.53
RAB28-202ENST00000330852 ATG3Q9NT62 314 aa24.61■■□□□ 1.53
RAB28-202ENST00000330852 SSFA2P28290 1259 aa24.6■■□□□ 1.53
RAB28-202ENST00000330852 NPC1L1Q9UHC9 1359 aa24.6■■□□□ 1.53
RAB28-202ENST00000330852 ATP6V1AP38606 617 aa24.59■■□□□ 1.53
RAB28-202ENST00000330852 C1orf141Q5JVX7 400 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms