RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 C14orf93Q9H972 538 aaKnown RBP9.28□□□□□ -0.92
SMG1-201ENST00000330588 YTHDC2Q9H6S0 1430 aaKnown RBP9.27□□□□□ -0.93
SMG1-201ENST00000330588 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.27□□□□□ -0.93
SMG1-201ENST00000330588 FAM198AQ9UFP1 575 aa9.27□□□□□ -0.93
SMG1-201ENST00000330588 TSR3Q9UJK0 312 aaKnown RBP9.27□□□□□ -0.93
SMG1-201ENST00000330588 DHX57Q6P158 1386 aaKnown RBP9.26□□□□□ -0.93
SMG1-201ENST00000330588 RGL3Q3MIN7 710 aa9.26□□□□□ -0.93
SMG1-201ENST00000330588 KIAA1210Q9ULL0 1709 aa9.26□□□□□ -0.93
SMG1-201ENST00000330588 ADGRB1O14514 1584 aa9.25□□□□□ -0.93
SMG1-201ENST00000330588 ADGRB2O60241 1585 aa9.25□□□□□ -0.93
SMG1-201ENST00000330588 PRSS12P56730 875 aa9.25□□□□□ -0.93
SMG1-201ENST00000330588 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
SMG1-201ENST00000330588 LRCH3Q96II8 777 aa9.25□□□□□ -0.93
SMG1-201ENST00000330588 SOCS7O14512 581 aa9.24□□□□□ -0.93
SMG1-201ENST00000330588 ILDR2Q71H61 639 aa9.24□□□□□ -0.93
SMG1-201ENST00000330588 HPS5Q9UPZ3 1129 aa9.24□□□□□ -0.93
SMG1-201ENST00000330588 FMN2Q9NZ56 1722 aa9.24□□□□□ -0.93
SMG1-201ENST00000330588 KIF1AQ12756 1690 aa9.24□□□□□ -0.93
SMG1-201ENST00000330588 OSBPP22059 807 aa9.24□□□□□ -0.93
SMG1-201ENST00000330588 WDR70Q9NW82 654 aa9.24□□□□□ -0.93
SMG1-201ENST00000330588 COL22A1Q8NFW1 1626 aaPredicted RBP9.23□□□□□ -0.93
SMG1-201ENST00000330588 C3orf80F5H4A9 247 aa9.23□□□□□ -0.93
SMG1-201ENST00000330588 KCNC4Q03721 635 aa9.23□□□□□ -0.93
SMG1-201ENST00000330588 LRRC59Q96AG4 307 aaKnown RBP9.23□□□□□ -0.93
SMG1-201ENST00000330588 SOS2Q07890 1332 aaPredicted RBP9.22□□□□□ -0.93
SMG1-201ENST00000330588 GRXCR2A6NFK2 248 aa9.22□□□□□ -0.93
SMG1-201ENST00000330588 ANKARQ7Z5J8 1434 aa9.21□□□□□ -0.93
SMG1-201ENST00000330588 RBM27Q9P2N5 1060 aaKnown RBP9.21□□□□□ -0.93
SMG1-201ENST00000330588 EIF3AQ14152 1382 aaKnown RBP9.21□□□□□ -0.93
SMG1-201ENST00000330588 NPHP3Q7Z494 1330 aa9.21□□□□□ -0.94
SMG1-201ENST00000330588 IRX2Q9BZI1 471 aaPredicted RBP9.2□□□□□ -0.94
SMG1-201ENST00000330588 LRP6O75581 1613 aa9.2□□□□□ -0.94
SMG1-201ENST00000330588 PNPLA6Q8IY17 1366 aa9.2□□□□□ -0.94
SMG1-201ENST00000330588 PXDNQ92626 1479 aa9.2□□□□□ -0.94
SMG1-201ENST00000330588 MYT1Q01538 1121 aa9.2□□□□□ -0.94
SMG1-201ENST00000330588 CFAP70Q5T0N1 1121 aa9.2□□□□□ -0.94
SMG1-201ENST00000330588 TATDN2Q93075 761 aa9.2□□□□□ -0.94
SMG1-201ENST00000330588 CDHR5Q9HBB8 845 aa9.2□□□□□ -0.94
SMG1-201ENST00000330588 RGS17Q9UGC6 210 aaPredicted RBP9.2□□□□□ -0.94
SMG1-201ENST00000330588 ARHGEF28Q8N1W1 1705 aaKnown RBP9.19□□□□□ -0.94
SMG1-201ENST00000330588 SMAPO00193 183 aa9.19□□□□□ -0.94
SMG1-201ENST00000330588 TMEM132EQ6IEE7 984 aa9.19□□□□□ -0.94
SMG1-201ENST00000330588 TTC13Q8NBP0 860 aa9.19□□□□□ -0.94
SMG1-201ENST00000330588 DCAF11Q8TEB1 546 aa9.19□□□□□ -0.94
SMG1-201ENST00000330588 PLEKHH1Q9ULM0 1364 aa9.19□□□□□ -0.94
SMG1-201ENST00000330588 CDK12Q9NYV4 1490 aaPredicted RBP9.18□□□□□ -0.94
SMG1-201ENST00000330588 NBPF26B4DH59 902 aa9.18□□□□□ -0.94
SMG1-201ENST00000330588 SAMD7Q7Z3H4 446 aa9.18□□□□□ -0.94
SMG1-201ENST00000330588 PPP4CP60510 307 aa9.17□□□□□ -0.94
SMG1-201ENST00000330588 ZNF772Q68DY9 489 aaPredicted RBP9.17□□□□□ -0.94
SMG1-201ENST00000330588 WAPLQ7Z5K2 1190 aa9.17□□□□□ -0.94
SMG1-201ENST00000330588 STK26Q9P289 416 aa9.17□□□□□ -0.94
SMG1-201ENST00000330588 TULP4Q9NRJ4 1543 aa9.17□□□□□ -0.94
SMG1-201ENST00000330588 ORAI2Q96SN7 254 aa9.16□□□□□ -0.94
SMG1-201ENST00000330588 NPDC1Q9NQX5 325 aaPredicted RBP9.16□□□□□ -0.94
SMG1-201ENST00000330588 USP32Q8NFA0 1604 aa9.16□□□□□ -0.94
SMG1-201ENST00000330588 TJAP1Q5JTD0 557 aa9.16□□□□□ -0.94
SMG1-201ENST00000330588 PRAM1Q96QH2 718 aa9.16□□□□□ -0.94
SMG1-201ENST00000330588 PNMA3Q9UL41 463 aa9.16□□□□□ -0.94
SMG1-201ENST00000330588 ITSN1Q15811 1721 aa9.15□□□□□ -0.94
SMG1-201ENST00000330588 SBNO1A3KN83 1393 aa9.15□□□□□ -0.94
SMG1-201ENST00000330588 MARF1Q9Y4F3 1742 aaKnown RBP9.15□□□□□ -0.94
SMG1-201ENST00000330588 ESCO1Q5FWF5 840 aa9.15□□□□□ -0.95
SMG1-201ENST00000330588 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
SMG1-201ENST00000330588 POGKQ9P215 609 aa9.14□□□□□ -0.95
SMG1-201ENST00000330588 MEX3CQ5U5Q3 659 aaKnown RBP9.13□□□□□ -0.95
SMG1-201ENST00000330588 POTEAQ6S8J7 498 aa9.13□□□□□ -0.95
SMG1-201ENST00000330588 NUDT18Q6ZVK8 323 aa9.13□□□□□ -0.95
SMG1-201ENST00000330588 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.13□□□□□ -0.95
SMG1-201ENST00000330588 RGPD8O14715 1765 aaPredicted RBP9.13□□□□□ -0.95
SMG1-201ENST00000330588 TRPM1Q7Z4N2 1603 aa9.13□□□□□ -0.95
SMG1-201ENST00000330588 TNS3Q68CZ2 1445 aa9.13□□□□□ -0.95
SMG1-201ENST00000330588 TRPM3Q9HCF6 1732 aaPredicted RBP9.12□□□□□ -0.95
SMG1-201ENST00000330588 PSME1Q06323 249 aa9.12□□□□□ -0.95
SMG1-201ENST00000330588 SPATA31A3Q5VYP0 1347 aa9.12□□□□□ -0.95
SMG1-201ENST00000330588 ARHGEF10O15013 1369 aa9.12□□□□□ -0.95
SMG1-201ENST00000330588 TOPAZ1Q8N9V7 1692 aa9.12□□□□□ -0.95
SMG1-201ENST00000330588 WASLO00401 505 aaPredicted RBP9.12□□□□□ -0.95
SMG1-201ENST00000330588 TRIM26Q12899 539 aaPredicted RBP9.12□□□□□ -0.95
SMG1-201ENST00000330588 DDX17Q92841 729 aaKnown RBP9.12□□□□□ -0.95
SMG1-201ENST00000330588 TRAK1Q9UPV9 953 aa9.12□□□□□ -0.95
SMG1-201ENST00000330588 ATP7BP35670 1465 aa9.11□□□□□ -0.95
SMG1-201ENST00000330588 ALS2Q96Q42 1657 aa9.11□□□□□ -0.95
SMG1-201ENST00000330588 FOXO3O43524 673 aa9.11□□□□□ -0.95
SMG1-201ENST00000330588 FNBP4Q8N3X1 1017 aaPredicted RBP9.11□□□□□ -0.95
SMG1-201ENST00000330588 AFF2P51816 1311 aa9.11□□□□□ -0.95
SMG1-201ENST00000330588 BRD4O60885 1362 aaPredicted RBP9.11□□□□□ -0.95
SMG1-201ENST00000330588 ABCA3Q99758 1704 aa9.1□□□□□ -0.95
SMG1-201ENST00000330588 PADI6Q6TGC4 694 aa9.1□□□□□ -0.95
SMG1-201ENST00000330588 KRT28Q7Z3Y7 464 aa9.1□□□□□ -0.95
SMG1-201ENST00000330588 ARHGEF1Q92888 912 aaKnown RBP9.1□□□□□ -0.95
SMG1-201ENST00000330588 MTRQ99707 1265 aa9.1□□□□□ -0.95
SMG1-201ENST00000330588 GPRASP1Q5JY77 1395 aa9.1□□□□□ -0.95
SMG1-201ENST00000330588 NUTM2BA6NNL0 878 aaPredicted RBP9.09□□□□□ -0.95
SMG1-201ENST00000330588 NUTM2EB1AL46 878 aaPredicted RBP9.09□□□□□ -0.95
SMG1-201ENST00000330588 NUTM2AQ8IVF1 878 aaPredicted RBP9.09□□□□□ -0.95
SMG1-201ENST00000330588 L3MBTL2Q969R5 705 aa9.09□□□□□ -0.95
SMG1-201ENST00000330588 IL21Q9HBE4 155 aa9.09□□□□□ -0.95
SMG1-201ENST00000330588 POLR3AO14802 1390 aaPredicted RBP9.09□□□□□ -0.95
SMG1-201ENST00000330588 NWD2Q9ULI1 1742 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms