RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TPM1P09493 284 aa16.69■□□□□ 0.26
EPHB3-201ENST00000330394 HSP90B2PQ58FF3 399 aa16.69■□□□□ 0.26
EPHB3-201ENST00000330394 CARD14Q9BXL6 1004 aa16.69■□□□□ 0.26
EPHB3-201ENST00000330394 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
EPHB3-201ENST00000330394 AEBP1Q8IUX7 1158 aa16.69■□□□□ 0.26
EPHB3-201ENST00000330394 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
EPHB3-201ENST00000330394 TXNDC2Q86VQ3 553 aa16.68■□□□□ 0.26
EPHB3-201ENST00000330394 IFT140Q96RY7 1462 aa16.68■□□□□ 0.26
EPHB3-201ENST00000330394 TSR1Q2NL82 804 aaKnown RBP16.68■□□□□ 0.26
EPHB3-201ENST00000330394 SPG7Q9UQ90 795 aa16.68■□□□□ 0.26
EPHB3-201ENST00000330394 TRIM29Q14134 588 aa16.68■□□□□ 0.26
EPHB3-201ENST00000330394 TSC1Q92574 1164 aa16.68■□□□□ 0.26
EPHB3-201ENST00000330394 NLRP6P59044 892 aa16.67■□□□□ 0.26
EPHB3-201ENST00000330394 STK38Q15208 465 aa16.67■□□□□ 0.26
EPHB3-201ENST00000330394 PTPN14Q15678 1187 aa16.67■□□□□ 0.26
EPHB3-201ENST00000330394 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
EPHB3-201ENST00000330394 C17orf53Q8N3J3 647 aaPredicted RBP16.66■□□□□ 0.26
EPHB3-201ENST00000330394 DTNBO60941 627 aa16.66■□□□□ 0.26
EPHB3-201ENST00000330394 WASHC4Q2M389 1173 aa16.66■□□□□ 0.26
EPHB3-201ENST00000330394 SRCIN1Q9C0H9 1055 aa16.66■□□□□ 0.26
EPHB3-201ENST00000330394 ZBTB40Q9NUA8 1239 aa16.66■□□□□ 0.26
EPHB3-201ENST00000330394 PPFIA3O75145 1194 aa16.66■□□□□ 0.26
EPHB3-201ENST00000330394 SERPINC1P01008 464 aa16.65■□□□□ 0.26
EPHB3-201ENST00000330394 USP48Q86UV5 1035 aa16.65■□□□□ 0.26
EPHB3-201ENST00000330394 CNPY2Q9Y2B0 182 aa16.65■□□□□ 0.26
EPHB3-201ENST00000330394 DDX58O95786 925 aaKnown RBP16.65■□□□□ 0.26
EPHB3-201ENST00000330394 BRPF1P55201 1214 aaPredicted RBP16.65■□□□□ 0.26
EPHB3-201ENST00000330394 TRDNQ13061 729 aa16.65■□□□□ 0.26
EPHB3-201ENST00000330394 MEIS3Q99687 375 aa16.65■□□□□ 0.26
EPHB3-201ENST00000330394 MBIPQ9NS73 344 aa16.65■□□□□ 0.26
EPHB3-201ENST00000330394 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.65■□□□□ 0.26
EPHB3-201ENST00000330394 V9GYY5 206 aaPredicted RBP16.65■□□□□ 0.26
EPHB3-201ENST00000330394 PRAG1Q86YV5 1406 aa16.64■□□□□ 0.25
EPHB3-201ENST00000330394 NFXL1Q6ZNB6 911 aa16.64■□□□□ 0.25
EPHB3-201ENST00000330394 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.64■□□□□ 0.25
EPHB3-201ENST00000330394 CCDC141Q6ZP82 1450 aa16.64■□□□□ 0.25
EPHB3-201ENST00000330394 STX6O43752 255 aa16.64■□□□□ 0.25
EPHB3-201ENST00000330394 TSPYL6Q8N831 410 aa16.64■□□□□ 0.25
EPHB3-201ENST00000330394 CLIP2Q9UDT6 1046 aa16.64■□□□□ 0.25
EPHB3-201ENST00000330394 NUP153P49790 1475 aaKnown RBP16.64■□□□□ 0.25
EPHB3-201ENST00000330394 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
EPHB3-201ENST00000330394 PRIMPOLQ96LW4 560 aa16.64■□□□□ 0.25
EPHB3-201ENST00000330394 POLR3GO15318 223 aaPredicted RBP16.63■□□□□ 0.25
EPHB3-201ENST00000330394 AACSQ86V21 672 aa16.63■□□□□ 0.25
EPHB3-201ENST00000330394 UBXN4Q92575 508 aa16.63■□□□□ 0.25
EPHB3-201ENST00000330394 CHAMP1Q96JM3 812 aa16.63■□□□□ 0.25
EPHB3-201ENST00000330394 PCMTD1Q96MG8 357 aaPredicted RBP16.63■□□□□ 0.25
EPHB3-201ENST00000330394 SPATA31E1Q6ZUB1 1445 aa16.63■□□□□ 0.25
EPHB3-201ENST00000330394 OLFM4Q6UX06 510 aa16.63■□□□□ 0.25
EPHB3-201ENST00000330394 CHMP4CQ96CF2 233 aa16.63■□□□□ 0.25
EPHB3-201ENST00000330394 AKAP17AQ02040 695 aaKnown RBP16.62■□□□□ 0.25
EPHB3-201ENST00000330394 WAPLQ7Z5K2 1190 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 LIMCH1Q9UPQ0 1083 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 GRIN2AQ12879 1464 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 TEX14Q8IWB6 1497 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 ABCC11Q96J66 1382 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 SCAF11Q99590 1463 aaKnown RBP16.62■□□□□ 0.25
EPHB3-201ENST00000330394 RAB11FIP3O75154 756 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 IPO7O95373 1038 aaKnown RBP16.62■□□□□ 0.25
EPHB3-201ENST00000330394 NME9Q86XW9 330 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 EID1Q9Y6B2 187 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 CCDC186Q7Z3E2 898 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 CEP57L1Q8IYX8 460 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 TCEANC2Q96MN5 208 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 NOL7Q9UMY1 257 aaKnown RBP16.62■□□□□ 0.25
EPHB3-201ENST00000330394 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
EPHB3-201ENST00000330394 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
EPHB3-201ENST00000330394 OTUD7AQ8TE49 926 aaPredicted RBP16.61■□□□□ 0.25
EPHB3-201ENST00000330394 RBM25P49756 843 aaKnown RBP16.61■□□□□ 0.25
EPHB3-201ENST00000330394 ZNF165P49910 485 aa16.61■□□□□ 0.25
EPHB3-201ENST00000330394 GUCY1B3Q02153 619 aa16.61■□□□□ 0.25
EPHB3-201ENST00000330394 ZSCAN31Q96LW9 406 aaPredicted RBP16.6■□□□□ 0.25
EPHB3-201ENST00000330394 GJB2P29033 226 aa16.6■□□□□ 0.25
EPHB3-201ENST00000330394 C8orf58Q8NAV2 365 aa16.6■□□□□ 0.25
EPHB3-201ENST00000330394 KIF18AQ8NI77 898 aa16.6■□□□□ 0.25
EPHB3-201ENST00000330394 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
EPHB3-201ENST00000330394 CWC15Q9P013 229 aaKnown RBP16.6■□□□□ 0.25
EPHB3-201ENST00000330394 ZBTB9Q96C00 473 aa16.59■□□□□ 0.25
EPHB3-201ENST00000330394 UBE2HP62256 183 aa16.59■□□□□ 0.25
EPHB3-201ENST00000330394 PATL2C9JE40 543 aaKnown RBP16.59■□□□□ 0.25
EPHB3-201ENST00000330394 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
EPHB3-201ENST00000330394 ZNF396Q96N95 335 aaPredicted RBP16.59■□□□□ 0.25
EPHB3-201ENST00000330394 ASXL1Q8IXJ9 1541 aa16.59■□□□□ 0.25
EPHB3-201ENST00000330394 URI1O94763 535 aaPredicted RBP16.59■□□□□ 0.25
EPHB3-201ENST00000330394 GTF2F1P35269 517 aaKnown RBP eCLIP16.59■□□□□ 0.25
EPHB3-201ENST00000330394 CFAP43Q8NDM7 1665 aa16.58■□□□□ 0.25
EPHB3-201ENST00000330394 SETQ01105 290 aaPredicted RBP16.58■□□□□ 0.25
EPHB3-201ENST00000330394 NOM1Q5C9Z4 860 aaKnown RBP16.58■□□□□ 0.25
EPHB3-201ENST00000330394 PLEKHM2Q8IWE5 1019 aa16.58■□□□□ 0.25
EPHB3-201ENST00000330394 TTC5Q8N0Z6 440 aa16.58■□□□□ 0.25
EPHB3-201ENST00000330394 PZPP20742 1482 aa16.58■□□□□ 0.24
EPHB3-201ENST00000330394 ANKRD1Q15327 319 aa16.58■□□□□ 0.24
EPHB3-201ENST00000330394 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.24
EPHB3-201ENST00000330394 HOOK1Q9UJC3 728 aaKnown RBP16.58■□□□□ 0.24
EPHB3-201ENST00000330394 PDE1AP54750 535 aa16.58■□□□□ 0.24
EPHB3-201ENST00000330394 HS1BP3Q53T59 392 aa16.58■□□□□ 0.24
EPHB3-201ENST00000330394 LEKR1Q6ZMV7 388 aa16.58■□□□□ 0.24
EPHB3-201ENST00000330394 BOLA2Q9H3K6 86 aa16.58■□□□□ 0.24
EPHB3-201ENST00000330394 TMX1Q9H3N1 280 aa16.58■□□□□ 0.24
EPHB3-201ENST00000330394 CFAP45Q9UL16 551 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms