RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 COG6Q9Y2V7 657 aa26.03■■□□□ 1.76
RIPPLY3-201ENST00000329553 RLBP1P12271 317 aa26.03■■□□□ 1.76
RIPPLY3-201ENST00000329553 ANKRD24Q8TF21 1146 aa26.03■■□□□ 1.76
RIPPLY3-201ENST00000329553 CHL1O00533 1208 aa26.02■■□□□ 1.76
RIPPLY3-201ENST00000329553 ALDH1L2Q3SY69 923 aa26.02■■□□□ 1.76
RIPPLY3-201ENST00000329553 CRB1P82279 1406 aa26.02■■□□□ 1.76
RIPPLY3-201ENST00000329553 ELL2O00472 640 aaPredicted RBP26.01■■□□□ 1.75
RIPPLY3-201ENST00000329553 ZKSCAN2Q63HK3 967 aa26.01■■□□□ 1.75
RIPPLY3-201ENST00000329553 C8orf58Q8NAV2 365 aa26.01■■□□□ 1.75
RIPPLY3-201ENST00000329553 ZNF428Q96B54 188 aa26.01■■□□□ 1.75
RIPPLY3-201ENST00000329553 CLUAP1Q96AJ1 413 aa26■■□□□ 1.75
RIPPLY3-201ENST00000329553 HTATSF1O43719 755 aaKnown RBP25.99■■□□□ 1.75
RIPPLY3-201ENST00000329553 GNAT3A8MTJ3 354 aa25.99■■□□□ 1.75
RIPPLY3-201ENST00000329553 TWISTNBQ3B726 338 aaPredicted RBP25.99■■□□□ 1.75
RIPPLY3-201ENST00000329553 RGPD5Q99666 1765 aa25.99■■□□□ 1.75
RIPPLY3-201ENST00000329553 SOS2Q07890 1332 aaPredicted RBP25.98■■□□□ 1.75
RIPPLY3-201ENST00000329553 NOB1Q9ULX3 412 aaKnown RBP25.98■■□□□ 1.75
RIPPLY3-201ENST00000329553 TRIM27P14373 513 aa25.95■■□□□ 1.75
RIPPLY3-201ENST00000329553 DZIP1LQ8IYY4 767 aaKnown RBP25.95■■□□□ 1.75
RIPPLY3-201ENST00000329553 MIS18AQ9NYP9 233 aa25.95■■□□□ 1.75
RIPPLY3-201ENST00000329553 ERBB3P21860 1342 aa25.95■■□□□ 1.74
RIPPLY3-201ENST00000329553 NCAPD2Q15021 1401 aa25.95■■□□□ 1.74
RIPPLY3-201ENST00000329553 BRPF1P55201 1214 aaPredicted RBP25.95■■□□□ 1.74
RIPPLY3-201ENST00000329553 MAP3K5Q99683 1374 aa25.95■■□□□ 1.74
RIPPLY3-201ENST00000329553 ATF7IPQ6VMQ6 1270 aa25.94■■□□□ 1.74
RIPPLY3-201ENST00000329553 IL17REQ8NFR9 667 aa25.94■■□□□ 1.74
RIPPLY3-201ENST00000329553 CRYBG1Q9Y4K1 1723 aa25.93■■□□□ 1.74
RIPPLY3-201ENST00000329553 KIF16BQ96L93 1317 aa25.93■■□□□ 1.74
RIPPLY3-201ENST00000329553 KRT24Q2M2I5 525 aa25.93■■□□□ 1.74
RIPPLY3-201ENST00000329553 MS4A1P11836 297 aa25.92■■□□□ 1.74
RIPPLY3-201ENST00000329553 MRPL50Q8N5N7 158 aaKnown RBP25.92■■□□□ 1.74
RIPPLY3-201ENST00000329553 COL18A1P39060 1754 aa25.92■■□□□ 1.74
RIPPLY3-201ENST00000329553 CHRNA2Q15822 529 aa25.92■■□□□ 1.74
RIPPLY3-201ENST00000329553 FTSJ3Q8IY81 847 aaKnown RBP25.92■■□□□ 1.74
RIPPLY3-201ENST00000329553 IPO8O15397 1037 aaKnown RBP25.91■■□□□ 1.74
RIPPLY3-201ENST00000329553 KDM2BQ8NHM5 1336 aa25.91■■□□□ 1.74
RIPPLY3-201ENST00000329553 TCERG1O14776 1098 aaKnown RBP25.91■■□□□ 1.74
RIPPLY3-201ENST00000329553 TSPYL4Q9UJ04 414 aa25.9■■□□□ 1.74
RIPPLY3-201ENST00000329553 KIAA0232Q92628 1395 aa25.9■■□□□ 1.74
RIPPLY3-201ENST00000329553 MVPQ14764 893 aaKnown RBP25.9■■□□□ 1.74
RIPPLY3-201ENST00000329553 CAMTA1Q9Y6Y1 1673 aa25.89■■□□□ 1.74
RIPPLY3-201ENST00000329553 PLEKHO1Q53GL0 409 aaPredicted RBP25.89■■□□□ 1.74
RIPPLY3-201ENST00000329553 CPDO75976 1380 aa25.88■■□□□ 1.73
RIPPLY3-201ENST00000329553 NOP58Q9Y2X3 529 aaKnown RBP25.88■■□□□ 1.73
RIPPLY3-201ENST00000329553 LRRC37A3O60309 1634 aa25.88■■□□□ 1.73
RIPPLY3-201ENST00000329553 AMOTQ4VCS5 1084 aa25.87■■□□□ 1.73
RIPPLY3-201ENST00000329553 CENPQQ7L2Z9 268 aaPredicted RBP25.87■■□□□ 1.73
RIPPLY3-201ENST00000329553 AAMPQ13685 434 aa25.86■■□□□ 1.73
RIPPLY3-201ENST00000329553 NLRP2Q9NX02 1062 aa25.86■■□□□ 1.73
RIPPLY3-201ENST00000329553 ZNF530Q6P9A1 599 aaPredicted RBP25.86■■□□□ 1.73
RIPPLY3-201ENST00000329553 LMO7Q8WWI1 1683 aa25.84■■□□□ 1.73
RIPPLY3-201ENST00000329553 TAF7Q15545 349 aaPredicted RBP25.84■■□□□ 1.73
RIPPLY3-201ENST00000329553 AKAP4Q5JQC9 854 aa25.84■■□□□ 1.73
RIPPLY3-201ENST00000329553 LGR6Q9HBX8 967 aa25.84■■□□□ 1.73
RIPPLY3-201ENST00000329553 TMEM57Q8N5G2 664 aa25.84■■□□□ 1.73
RIPPLY3-201ENST00000329553 ARHGAP45Q92619 1136 aa25.84■■□□□ 1.73
RIPPLY3-201ENST00000329553 NHSL1Q5SYE7 1610 aa25.83■■□□□ 1.73
RIPPLY3-201ENST00000329553 CEMIPQ8WUJ3 1361 aa25.83■■□□□ 1.73
RIPPLY3-201ENST00000329553 ANP32AP39687 249 aaKnown RBP25.83■■□□□ 1.73
RIPPLY3-201ENST00000329553 HAP1P54257 671 aaPredicted RBP25.83■■□□□ 1.73
RIPPLY3-201ENST00000329553 IGHDP01880 384 aa25.83■■□□□ 1.72
RIPPLY3-201ENST00000329553 CSB-PGBD3P0DP91 1061 aa25.83■■□□□ 1.72
RIPPLY3-201ENST00000329553 ABCC6O95255 1503 aa25.82■■□□□ 1.72
RIPPLY3-201ENST00000329553 ITPRIPQ8IWB1 547 aa25.82■■□□□ 1.72
RIPPLY3-201ENST00000329553 IPO9Q96P70 1041 aaKnown RBP25.82■■□□□ 1.72
RIPPLY3-201ENST00000329553 PCDHB15Q9Y5E8 787 aa25.82■■□□□ 1.72
RIPPLY3-201ENST00000329553 BABAM1Q9NWV8 329 aa25.81■■□□□ 1.72
RIPPLY3-201ENST00000329553 DDX19BQ9UMR2 479 aa25.8■■□□□ 1.72
RIPPLY3-201ENST00000329553 MPRIPQ6WCQ1 1025 aa25.79■■□□□ 1.72
RIPPLY3-201ENST00000329553 SKAP1Q86WV1 359 aa25.79■■□□□ 1.72
RIPPLY3-201ENST00000329553 PRDM11Q9NQV5 511 aa25.79■■□□□ 1.72
RIPPLY3-201ENST00000329553 LTBP4Q8N2S1 1624 aa25.79■■□□□ 1.72
RIPPLY3-201ENST00000329553 C1orf141Q5JVX7 400 aa25.79■■□□□ 1.72
RIPPLY3-201ENST00000329553 RAPGEF4Q8WZA2 1011 aa25.79■■□□□ 1.72
RIPPLY3-201ENST00000329553 FAM208AQ9UK61 1670 aaKnown RBP25.78■■□□□ 1.72
RIPPLY3-201ENST00000329553 RNMTO43148 476 aaKnown RBP25.76■■□□□ 1.71
RIPPLY3-201ENST00000329553 TATP17735 454 aaPredicted RBP25.75■■□□□ 1.71
RIPPLY3-201ENST00000329553 API5Q9BZZ5 524 aaKnown RBP25.74■■□□□ 1.71
RIPPLY3-201ENST00000329553 ABCC4O15439 1325 aa25.74■■□□□ 1.71
RIPPLY3-201ENST00000329553 ABCA3Q99758 1704 aa25.74■■□□□ 1.71
RIPPLY3-201ENST00000329553 TEFQ10587 303 aa25.73■■□□□ 1.71
RIPPLY3-201ENST00000329553 ZBTB40Q9NUA8 1239 aa25.73■■□□□ 1.71
RIPPLY3-201ENST00000329553 MEGF6O75095 1541 aa25.73■■□□□ 1.71
RIPPLY3-201ENST00000329553 SLC4A2P04920 1241 aa25.72■■□□□ 1.71
RIPPLY3-201ENST00000329553 ROBO1Q9Y6N7 1651 aa25.72■■□□□ 1.71
RIPPLY3-201ENST00000329553 PDE4AP27815 886 aa25.71■■□□□ 1.71
RIPPLY3-201ENST00000329553 BACH2Q9BYV9 841 aa25.71■■□□□ 1.71
RIPPLY3-201ENST00000329553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.71■■□□□ 1.71
RIPPLY3-201ENST00000329553 WDR17Q8IZU2 1322 aa25.7■■□□□ 1.7
RIPPLY3-201ENST00000329553 VIRMAQ69YN4 1812 aaKnown RBP25.7■■□□□ 1.7
RIPPLY3-201ENST00000329553 SPG7Q9UQ90 795 aa25.69■■□□□ 1.7
RIPPLY3-201ENST00000329553 ZBTB7BO15156 539 aaPredicted RBP25.69■■□□□ 1.7
RIPPLY3-201ENST00000329553 BTBD11A6QL63 1104 aa25.68■■□□□ 1.7
RIPPLY3-201ENST00000329553 KCNQ3O43525 872 aa25.68■■□□□ 1.7
RIPPLY3-201ENST00000329553 OVOS2A0A0G2JMS6 1433 aa25.68■■□□□ 1.7
RIPPLY3-201ENST00000329553 SOS1Q07889 1333 aaPredicted RBP25.68■■□□□ 1.7
RIPPLY3-201ENST00000329553 EIF4A1P60842 406 aaKnown RBP25.68■■□□□ 1.7
RIPPLY3-201ENST00000329553 RWDD1Q9H446 243 aaPredicted RBP25.68■■□□□ 1.7
RIPPLY3-201ENST00000329553 COL5A2P05997 1499 aaPredicted RBP25.67■■□□□ 1.7
RIPPLY3-201ENST00000329553 TOM1L2Q6ZVM7 507 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms