RNA–Protein interactions for RNA: ENST00000327956.6

SCN5A-201, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-201ENST00000327956 NSD3Q9BZ95 1437 aa24.07■■□□□ 1.44
SCN5A-201ENST00000327956 INSRP06213 1382 aa24.06■■□□□ 1.44
SCN5A-201ENST00000327956 YY1P25490 414 aa24.06■■□□□ 1.44
SCN5A-201ENST00000327956 PRIM1P49642 420 aaKnown RBP24.06■■□□□ 1.44
SCN5A-201ENST00000327956 DOT1LQ8TEK3 1739 aa24.06■■□□□ 1.44
SCN5A-201ENST00000327956 MEGF6O75095 1541 aa24.05■■□□□ 1.44
SCN5A-201ENST00000327956 HMGB2P26583 209 aaKnown RBP24.05■■□□□ 1.44
SCN5A-201ENST00000327956 NBPF6Q5VWK0 638 aa24.05■■□□□ 1.44
SCN5A-201ENST00000327956 NBPF4Q96M43 638 aa24.05■■□□□ 1.44
SCN5A-201ENST00000327956 POLR3GLQ9BT43 218 aa24.05■■□□□ 1.44
SCN5A-201ENST00000327956 PAPPAQ13219 1627 aa24.05■■□□□ 1.44
SCN5A-201ENST00000327956 MYOM1P52179 1685 aa24.05■■□□□ 1.44
SCN5A-201ENST00000327956 USHBP1Q8N6Y0 703 aa24.04■■□□□ 1.44
SCN5A-201ENST00000327956 PTGER2P43116 358 aa24.03■■□□□ 1.44
SCN5A-201ENST00000327956 PCDH11XQ9BZA7 1347 aa24.03■■□□□ 1.44
SCN5A-201ENST00000327956 PCDH11YQ9BZA8 1340 aa24.03■■□□□ 1.44
SCN5A-201ENST00000327956 PPM1GO15355 546 aaPredicted RBP24.02■■□□□ 1.44
SCN5A-201ENST00000327956 HSP90AB2PQ58FF8 381 aa24.02■■□□□ 1.44
SCN5A-201ENST00000327956 TFCP2L1Q9NZI6 479 aa24.02■■□□□ 1.44
SCN5A-201ENST00000327956 ZNF827Q17R98 1081 aa24■■□□□ 1.43
SCN5A-201ENST00000327956 LRRC4BQ9NT99 713 aa24■■□□□ 1.43
SCN5A-201ENST00000327956 SHANK3Q9BYB0 1731 aa23.99■■□□□ 1.43
SCN5A-201ENST00000327956 POLD1P28340 1107 aa23.99■■□□□ 1.43
SCN5A-201ENST00000327956 SLC16A10Q8TF71 515 aa23.99■■□□□ 1.43
SCN5A-201ENST00000327956 ARXQ96QS3 562 aa23.99■■□□□ 1.43
SCN5A-201ENST00000327956 CARD14Q9BXL6 1004 aa23.99■■□□□ 1.43
SCN5A-201ENST00000327956 FHDC1Q9C0D6 1143 aaPredicted RBP23.99■■□□□ 1.43
SCN5A-201ENST00000327956 CCNL1Q9UK58 526 aaPredicted RBP23.99■■□□□ 1.43
SCN5A-201ENST00000327956 AKT1S1Q96B36 256 aa23.97■■□□□ 1.43
SCN5A-201ENST00000327956 EMILIN1Q9Y6C2 1016 aa23.97■■□□□ 1.43
SCN5A-201ENST00000327956 EIF4G2P78344 907 aaKnown RBP eCLIP23.96■■□□□ 1.43
SCN5A-201ENST00000327956 CCER1Q8TC90 406 aaPredicted RBP23.96■■□□□ 1.43
SCN5A-201ENST00000327956 SYT17Q9BSW7 474 aa23.96■■□□□ 1.43
SCN5A-201ENST00000327956 QSER1Q2KHR3 1735 aa23.96■■□□□ 1.43
SCN5A-201ENST00000327956 LY75O60449 1722 aa23.94■■□□□ 1.42
SCN5A-201ENST00000327956 NSD2O96028 1365 aa23.93■■□□□ 1.42
SCN5A-201ENST00000327956 MSH5O43196 834 aa23.93■■□□□ 1.42
SCN5A-201ENST00000327956 KLHL34Q8N239 644 aa23.93■■□□□ 1.42
SCN5A-201ENST00000327956 SPG7Q9UQ90 795 aa23.93■■□□□ 1.42
SCN5A-201ENST00000327956 SGIP1Q9BQI5 828 aa23.92■■□□□ 1.42
SCN5A-201ENST00000327956 PNPLA7Q6ZV29 1317 aa23.91■■□□□ 1.42
SCN5A-201ENST00000327956 KCNQ4P56696 695 aa23.91■■□□□ 1.42
SCN5A-201ENST00000327956 WASHC2AQ641Q2 1341 aa23.9■■□□□ 1.42
SCN5A-201ENST00000327956 MPRIPQ6WCQ1 1025 aa23.9■■□□□ 1.42
SCN5A-201ENST00000327956 SMARCC1Q92922 1105 aaPredicted RBP23.9■■□□□ 1.42
SCN5A-201ENST00000327956 ANKRD26Q9UPS8 1709 aa23.9■■□□□ 1.42
SCN5A-201ENST00000327956 MAP3K5Q99683 1374 aa23.9■■□□□ 1.42
SCN5A-201ENST00000327956 MAP2P11137 1827 aaKnown RBP23.89■■□□□ 1.41
SCN5A-201ENST00000327956 PALLDQ8WX93 1383 aa23.88■■□□□ 1.41
SCN5A-201ENST00000327956 TNNT2P45379 298 aaPredicted RBP23.87■■□□□ 1.41
SCN5A-201ENST00000327956 PKD1L3Q7Z443 1732 aa23.87■■□□□ 1.41
SCN5A-201ENST00000327956 CYP27B1O15528 508 aa23.86■■□□□ 1.41
SCN5A-201ENST00000327956 HSPA5P11021 654 aaKnown RBP23.86■■□□□ 1.41
SCN5A-201ENST00000327956 FLAD1Q8NFF5 587 aa23.86■■□□□ 1.41
SCN5A-201ENST00000327956 TUBGCP6Q96RT7 1819 aa23.84■■□□□ 1.41
SCN5A-201ENST00000327956 C5P01031 1676 aa23.84■■□□□ 1.41
SCN5A-201ENST00000327956 GPR162Q16538 588 aa23.84■■□□□ 1.41
SCN5A-201ENST00000327956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.84■■□□□ 1.41
SCN5A-201ENST00000327956 POLKQ9UBT6 870 aa23.84■■□□□ 1.41
SCN5A-201ENST00000327956 EYA1Q99502 592 aa23.83■■□□□ 1.41
SCN5A-201ENST00000327956 NCAPD2Q15021 1401 aa23.83■■□□□ 1.4
SCN5A-201ENST00000327956 AK7Q96M32 723 aa23.82■■□□□ 1.4
SCN5A-201ENST00000327956 TMOD3Q9NYL9 352 aa23.82■■□□□ 1.4
SCN5A-201ENST00000327956 IFNL2Q8IZJ0 200 aa23.81■■□□□ 1.4
SCN5A-201ENST00000327956 PELP1Q8IZL8 1130 aaKnown RBP23.81■■□□□ 1.4
SCN5A-201ENST00000327956 PANK3Q9H999 370 aa23.81■■□□□ 1.4
SCN5A-201ENST00000327956 ITGB4P16144 1822 aa23.8■■□□□ 1.4
SCN5A-201ENST00000327956 NKX1-1Q15270 411 aaPredicted RBP23.79■■□□□ 1.4
SCN5A-201ENST00000327956 PLEKHG2Q9H7P9 1386 aa23.78■■□□□ 1.4
SCN5A-201ENST00000327956 EIF4A2Q14240 407 aaKnown RBP23.78■■□□□ 1.4
SCN5A-201ENST00000327956 COL23A1Q86Y22 540 aaPredicted RBP23.78■■□□□ 1.4
SCN5A-201ENST00000327956 TOGARAM1Q9Y4F4 1720 aa23.78■■□□□ 1.4
SCN5A-201ENST00000327956 CHD4Q14839 1912 aa23.77■■□□□ 1.4
SCN5A-201ENST00000327956 COL24A1Q17RW2 1714 aa23.77■■□□□ 1.4
SCN5A-201ENST00000327956 MORC1Q86VD1 984 aa23.77■■□□□ 1.4
SCN5A-201ENST00000327956 PIGBQ92521 554 aa23.77■■□□□ 1.4
SCN5A-201ENST00000327956 KNSTRNQ9Y448 316 aa23.77■■□□□ 1.4
SCN5A-201ENST00000327956 TAF1LQ8IZX4 1826 aa23.75■■□□□ 1.39
SCN5A-201ENST00000327956 PHKG2P15735 406 aa23.75■■□□□ 1.39
SCN5A-201ENST00000327956 C4BP0C0L5 1744 aa23.74■■□□□ 1.39
SCN5A-201ENST00000327956 HSP90AB1P08238 724 aaKnown RBP23.74■■□□□ 1.39
SCN5A-201ENST00000327956 MSL1Q68DK7 614 aa23.74■■□□□ 1.39
SCN5A-201ENST00000327956 LOC102724428A0A0B4J2F2 783 aa23.72■■□□□ 1.39
SCN5A-201ENST00000327956 PHF14O94880 888 aa23.72■■□□□ 1.39
SCN5A-201ENST00000327956 SIK1P57059 783 aa23.72■■□□□ 1.39
SCN5A-201ENST00000327956 PLEKHO1Q53GL0 409 aaPredicted RBP23.72■■□□□ 1.39
SCN5A-201ENST00000327956 IGSF1Q8N6C5 1336 aa23.72■■□□□ 1.39
SCN5A-201ENST00000327956 ZNF784Q8NCA9 323 aaPredicted RBP23.71■■□□□ 1.39
SCN5A-201ENST00000327956 AMOTQ4VCS5 1084 aa23.7■■□□□ 1.38
SCN5A-201ENST00000327956 GRIN3BO60391 1043 aa23.69■■□□□ 1.38
SCN5A-201ENST00000327956 SSFA2P28290 1259 aa23.69■■□□□ 1.38
SCN5A-201ENST00000327956 ATP6V1AP38606 617 aa23.69■■□□□ 1.38
SCN5A-201ENST00000327956 C1orf141Q5JVX7 400 aa23.69■■□□□ 1.38
SCN5A-201ENST00000327956 NLGN2Q8NFZ4 835 aa23.68■■□□□ 1.38
SCN5A-201ENST00000327956 DCAF5Q96JK2 942 aa23.68■■□□□ 1.38
SCN5A-201ENST00000327956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.67■■□□□ 1.38
SCN5A-201ENST00000327956 ERVV-2B6SEH9 535 aa23.67■■□□□ 1.38
SCN5A-201ENST00000327956 ZNF530Q6P9A1 599 aaPredicted RBP23.67■■□□□ 1.38
SCN5A-201ENST00000327956 ASAP1Q9ULH1 1129 aa23.67■■□□□ 1.38
SCN5A-201ENST00000327956 CD2APQ9Y5K6 639 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms