RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 PALD1Q9ULE6 856 aa17.42■□□□□ 0.38
CHRNA3-201ENST00000326828 ZCCHC11Q5TAX3 1644 aaKnown RBP17.41■□□□□ 0.38
CHRNA3-201ENST00000326828 CSPP1Q1MSJ5 1256 aa17.41■□□□□ 0.38
CHRNA3-201ENST00000326828 SASS6Q6UVJ0 657 aa17.41■□□□□ 0.38
CHRNA3-201ENST00000326828 NCKAP5LQ9HCH0 1330 aa17.4■□□□□ 0.38
CHRNA3-201ENST00000326828 KIAA2012Q0VF49 1180 aa17.4■□□□□ 0.38
CHRNA3-201ENST00000326828 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
CHRNA3-201ENST00000326828 HS1BP3Q53T59 392 aa17.4■□□□□ 0.38
CHRNA3-201ENST00000326828 AEBP1Q8IUX7 1158 aa17.4■□□□□ 0.38
CHRNA3-201ENST00000326828 ANKRD44Q8N8A2 993 aa17.4■□□□□ 0.38
CHRNA3-201ENST00000326828 MAP4K4O95819 1239 aaPredicted RBP17.39■□□□□ 0.37
CHRNA3-201ENST00000326828 CBX1P83916 185 aa17.39■□□□□ 0.37
CHRNA3-201ENST00000326828 ZNF428Q96B54 188 aa17.39■□□□□ 0.37
CHRNA3-201ENST00000326828 CFAP44Q96MT7 982 aa17.39■□□□□ 0.37
CHRNA3-201ENST00000326828 A0A0U1RQG5 324 aaPredicted RBP17.39■□□□□ 0.37
CHRNA3-201ENST00000326828 EFCAB6Q5THR3 1501 aa17.39■□□□□ 0.37
CHRNA3-201ENST00000326828 RAPGEF3O95398 923 aa17.38■□□□□ 0.37
CHRNA3-201ENST00000326828 PPRC1Q5VV67 1664 aaKnown RBP17.38■□□□□ 0.37
CHRNA3-201ENST00000326828 COL3A1P02461 1466 aaPredicted RBP17.38■□□□□ 0.37
CHRNA3-201ENST00000326828 NRXN1Q9ULB1 1477 aa17.38■□□□□ 0.37
CHRNA3-201ENST00000326828 NUTM2FA1L443 756 aa17.38■□□□□ 0.37
CHRNA3-201ENST00000326828 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
CHRNA3-201ENST00000326828 MED14O60244 1454 aa17.38■□□□□ 0.37
CHRNA3-201ENST00000326828 LRRC7Q96NW7 1537 aa17.38■□□□□ 0.37
CHRNA3-201ENST00000326828 DYNC1I1O14576 645 aa17.38■□□□□ 0.37
CHRNA3-201ENST00000326828 MSH6P52701 1360 aa17.37■□□□□ 0.37
CHRNA3-201ENST00000326828 MAP7D2Q96T17 732 aa17.37■□□□□ 0.37
CHRNA3-201ENST00000326828 PRDM4Q9UKN5 801 aa17.37■□□□□ 0.37
CHRNA3-201ENST00000326828 CHMP3Q9Y3E7 222 aa17.37■□□□□ 0.37
CHRNA3-201ENST00000326828 CHD1O14646 1710 aa17.37■□□□□ 0.37
CHRNA3-201ENST00000326828 MBD3O95983 291 aa17.36■□□□□ 0.37
CHRNA3-201ENST00000326828 HCLS1P14317 486 aaPredicted RBP17.36■□□□□ 0.37
CHRNA3-201ENST00000326828 USP48Q86UV5 1035 aa17.36■□□□□ 0.37
CHRNA3-201ENST00000326828 PTCH1Q13635 1447 aa17.36■□□□□ 0.37
CHRNA3-201ENST00000326828 MYO3AQ8NEV4 1616 aa17.36■□□□□ 0.37
CHRNA3-201ENST00000326828 DEPDC5O75140 1603 aa17.35■□□□□ 0.37
CHRNA3-201ENST00000326828 PDE1AP54750 535 aa17.35■□□□□ 0.37
CHRNA3-201ENST00000326828 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
CHRNA3-201ENST00000326828 GLI2P10070 1586 aa17.35■□□□□ 0.37
CHRNA3-201ENST00000326828 IGSF3O75054 1194 aa17.35■□□□□ 0.37
CHRNA3-201ENST00000326828 SULT6B1Q6IMI4 303 aa17.35■□□□□ 0.37
CHRNA3-201ENST00000326828 SPC24Q8NBT2 197 aa17.35■□□□□ 0.37
CHRNA3-201ENST00000326828 ADGRB3O60242 1522 aa17.35■□□□□ 0.37
CHRNA3-201ENST00000326828 BRPF1P55201 1214 aaPredicted RBP17.34■□□□□ 0.37
CHRNA3-201ENST00000326828 SPDYE4A6NLX3 237 aa17.34■□□□□ 0.37
CHRNA3-201ENST00000326828 FIBPO43427 364 aa17.34■□□□□ 0.37
CHRNA3-201ENST00000326828 TERF1P54274 439 aa17.34■□□□□ 0.37
CHRNA3-201ENST00000326828 G2E3Q7L622 706 aa17.34■□□□□ 0.37
CHRNA3-201ENST00000326828 RPAP2Q8IXW5 612 aaPredicted RBP17.34■□□□□ 0.37
CHRNA3-201ENST00000326828 MROH1Q8NDA8 1641 aa17.33■□□□□ 0.37
CHRNA3-201ENST00000326828 ADCY5O95622 1261 aa17.33■□□□□ 0.37
CHRNA3-201ENST00000326828 ZNF853P0CG23 659 aa17.33■□□□□ 0.37
CHRNA3-201ENST00000326828 IL13P35225 146 aa17.33■□□□□ 0.37
CHRNA3-201ENST00000326828 VWDEQ8N2E2 1590 aa17.33■□□□□ 0.36
CHRNA3-201ENST00000326828 FAM135BQ49AJ0 1406 aa17.33■□□□□ 0.36
CHRNA3-201ENST00000326828 SYAP1Q96A49 352 aaPredicted RBP17.33■□□□□ 0.36
CHRNA3-201ENST00000326828 IL1RAPL2Q9NP60 686 aa17.33■□□□□ 0.36
CHRNA3-201ENST00000326828 CNPY2Q9Y2B0 182 aa17.33■□□□□ 0.36
CHRNA3-201ENST00000326828 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
CHRNA3-201ENST00000326828 BRD1O95696 1058 aa17.32■□□□□ 0.36
CHRNA3-201ENST00000326828 MCCP23508 829 aa17.32■□□□□ 0.36
CHRNA3-201ENST00000326828 DDX54Q8TDD1 881 aaKnown RBP17.32■□□□□ 0.36
CHRNA3-201ENST00000326828 NOLC1Q14978 699 aaKnown RBP eCLIP17.31■□□□□ 0.36
CHRNA3-201ENST00000326828 FBXO31Q5XUX0 539 aaPredicted RBP17.31■□□□□ 0.36
CHRNA3-201ENST00000326828 PIK3R4Q99570 1358 aa17.31■□□□□ 0.36
CHRNA3-201ENST00000326828 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
CHRNA3-201ENST00000326828 UNC5CLQ8IV45 518 aa17.31■□□□□ 0.36
CHRNA3-201ENST00000326828 PUS7Q96PZ0 661 aaKnown RBP17.31■□□□□ 0.36
CHRNA3-201ENST00000326828 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
CHRNA3-201ENST00000326828 HMMRO75330 724 aa17.3■□□□□ 0.36
CHRNA3-201ENST00000326828 MCM5P33992 734 aa17.3■□□□□ 0.36
CHRNA3-201ENST00000326828 GIMAP6Q6P9H5 292 aa17.3■□□□□ 0.36
CHRNA3-201ENST00000326828 ESYT1Q9BSJ8 1104 aa17.3■□□□□ 0.36
CHRNA3-201ENST00000326828 CPA1P15085 419 aa17.3■□□□□ 0.36
CHRNA3-201ENST00000326828 PNPLA6Q8IY17 1366 aa17.3■□□□□ 0.36
CHRNA3-201ENST00000326828 PPP4R3BQ5MIZ7 849 aa17.29■□□□□ 0.36
CHRNA3-201ENST00000326828 CAMSAP1Q5T5Y3 1602 aa17.29■□□□□ 0.36
CHRNA3-201ENST00000326828 COG3Q96JB2 828 aa17.29■□□□□ 0.36
CHRNA3-201ENST00000326828 IFT172Q9UG01 1749 aa17.29■□□□□ 0.36
CHRNA3-201ENST00000326828 YTHDC2Q9H6S0 1430 aaKnown RBP17.29■□□□□ 0.36
CHRNA3-201ENST00000326828 NUTM1Q86Y26 1132 aa17.28■□□□□ 0.36
CHRNA3-201ENST00000326828 RIMS2Q9UQ26 1411 aa17.28■□□□□ 0.36
CHRNA3-201ENST00000326828 IL25Q9H293 177 aa17.28■□□□□ 0.36
CHRNA3-201ENST00000326828 ZC3H13Q5T200 1668 aaKnown RBP17.28■□□□□ 0.36
CHRNA3-201ENST00000326828 FOXO3O43524 673 aa17.28■□□□□ 0.36
CHRNA3-201ENST00000326828 SRCIN1Q9C0H9 1055 aa17.28■□□□□ 0.36
CHRNA3-201ENST00000326828 ATP10DQ9P241 1426 aa17.28■□□□□ 0.36
CHRNA3-201ENST00000326828 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
CHRNA3-201ENST00000326828 USP32Q8NFA0 1604 aa17.27■□□□□ 0.36
CHRNA3-201ENST00000326828 CD163L1Q9NR16 1453 aa17.27■□□□□ 0.36
CHRNA3-201ENST00000326828 MX1P20591 662 aa17.27■□□□□ 0.36
CHRNA3-201ENST00000326828 MYRIPQ8NFW9 859 aa17.27■□□□□ 0.36
CHRNA3-201ENST00000326828 CCDC94Q9BW85 323 aaPredicted RBP17.27■□□□□ 0.36
CHRNA3-201ENST00000326828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.26■□□□□ 0.35
CHRNA3-201ENST00000326828 PHF14O94880 888 aa17.26■□□□□ 0.35
CHRNA3-201ENST00000326828 ZNF710Q8N1W2 664 aa17.26■□□□□ 0.35
CHRNA3-201ENST00000326828 PODXL2Q9NZ53 605 aa17.26■□□□□ 0.35
CHRNA3-201ENST00000326828 PNMA6EA0A0J9YXQ4 647 aa17.26■□□□□ 0.35
CHRNA3-201ENST00000326828 FKBP5Q13451 457 aaPredicted RBP17.25■□□□□ 0.35
CHRNA3-201ENST00000326828 MTERF4Q7Z6M4 381 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms