RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 PTPRTO14522 1441 aa20.59■□□□□ 0.89
PPP3CA-201ENST00000323055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.59■□□□□ 0.89
PPP3CA-201ENST00000323055 TRDNQ13061 729 aa20.59■□□□□ 0.89
PPP3CA-201ENST00000323055 UGGT1Q9NYU2 1555 aa20.59■□□□□ 0.89
PPP3CA-201ENST00000323055 CHD1O14646 1710 aa20.59■□□□□ 0.89
PPP3CA-201ENST00000323055 ANKRD24Q8TF21 1146 aa20.59■□□□□ 0.89
PPP3CA-201ENST00000323055 NPC1L1Q9UHC9 1359 aa20.58■□□□□ 0.89
PPP3CA-201ENST00000323055 TRAK2O60296 914 aa20.58■□□□□ 0.89
PPP3CA-201ENST00000323055 MTHFSDQ2M296 383 aaKnown RBP20.58■□□□□ 0.89
PPP3CA-201ENST00000323055 CWC27Q6UX04 472 aaKnown RBP20.58■□□□□ 0.88
PPP3CA-201ENST00000323055 PLA2R1Q13018 1463 aa20.57■□□□□ 0.88
PPP3CA-201ENST00000323055 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
PPP3CA-201ENST00000323055 PIP4K2BP78356 416 aa20.57■□□□□ 0.88
PPP3CA-201ENST00000323055 LRRC59Q96AG4 307 aaKnown RBP20.57■□□□□ 0.88
PPP3CA-201ENST00000323055 MEIS3Q99687 375 aa20.57■□□□□ 0.88
PPP3CA-201ENST00000323055 MAP3K19Q56UN5 1328 aa20.57■□□□□ 0.88
PPP3CA-201ENST00000323055 RSPH6AQ9H0K4 717 aa20.56■□□□□ 0.88
PPP3CA-201ENST00000323055 PI4KAP2A4QPH2 592 aa20.56■□□□□ 0.88
PPP3CA-201ENST00000323055 K7ELQ4 463 aaPredicted RBP20.56■□□□□ 0.88
PPP3CA-201ENST00000323055 VAMP4O75379 141 aa20.56■□□□□ 0.88
PPP3CA-201ENST00000323055 CPLX2Q6PUV4 134 aaKnown RBP20.56■□□□□ 0.88
PPP3CA-201ENST00000323055 PI4KAP1Q8N8J0 262 aa20.56■□□□□ 0.88
PPP3CA-201ENST00000323055 MX1P20591 662 aa20.56■□□□□ 0.88
PPP3CA-201ENST00000323055 EYA1Q99502 592 aa20.56■□□□□ 0.88
PPP3CA-201ENST00000323055 TBX22Q9Y458 520 aa20.56■□□□□ 0.88
PPP3CA-201ENST00000323055 DBF4Q9UBU7 674 aaPredicted RBP20.55■□□□□ 0.88
PPP3CA-201ENST00000323055 CHAF1AQ13111 956 aaPredicted RBP20.55■□□□□ 0.88
PPP3CA-201ENST00000323055 TSHZ3Q63HK5 1081 aa20.55■□□□□ 0.88
PPP3CA-201ENST00000323055 PTPRCP08575 1304 aa20.54■□□□□ 0.88
PPP3CA-201ENST00000323055 SYNE3Q6ZMZ3 975 aa20.54■□□□□ 0.88
PPP3CA-201ENST00000323055 NEO1Q92859 1461 aa20.54■□□□□ 0.88
PPP3CA-201ENST00000323055 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
PPP3CA-201ENST00000323055 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
PPP3CA-201ENST00000323055 CNNM1Q9NRU3 951 aa20.54■□□□□ 0.88
PPP3CA-201ENST00000323055 MAGI2Q86UL8 1455 aa20.54■□□□□ 0.88
PPP3CA-201ENST00000323055 MYD88Q99836 296 aa20.54■□□□□ 0.88
PPP3CA-201ENST00000323055 MRPL50Q8N5N7 158 aaKnown RBP20.53■□□□□ 0.88
PPP3CA-201ENST00000323055 KIF1BPQ96EK5 621 aa20.53■□□□□ 0.88
PPP3CA-201ENST00000323055 HSPA2P54652 639 aa20.53■□□□□ 0.88
PPP3CA-201ENST00000323055 UPF3BQ9BZI7 483 aaKnown RBP20.53■□□□□ 0.88
PPP3CA-201ENST00000323055 LTKP29376 864 aa20.52■□□□□ 0.88
PPP3CA-201ENST00000323055 CADPS2Q86UW7 1296 aa20.52■□□□□ 0.88
PPP3CA-201ENST00000323055 RASSF8Q8NHQ8 419 aa20.52■□□□□ 0.88
PPP3CA-201ENST00000323055 BICD2Q8TD16 824 aa20.52■□□□□ 0.88
PPP3CA-201ENST00000323055 NFXL1Q6ZNB6 911 aa20.52■□□□□ 0.88
PPP3CA-201ENST00000323055 LARP1Q6PKG0 1096 aaKnown RBP20.52■□□□□ 0.87
PPP3CA-201ENST00000323055 PSMA5P28066 241 aa20.51■□□□□ 0.87
PPP3CA-201ENST00000323055 AKAP17AQ02040 695 aaKnown RBP20.51■□□□□ 0.87
PPP3CA-201ENST00000323055 CCDC57Q2TAC2 916 aa20.51■□□□□ 0.87
PPP3CA-201ENST00000323055 ARHGAP45Q92619 1136 aa20.51■□□□□ 0.87
PPP3CA-201ENST00000323055 PRPF40AO75400 957 aaKnown RBP20.51■□□□□ 0.87
PPP3CA-201ENST00000323055 PREX2Q70Z35 1606 aa20.51■□□□□ 0.87
PPP3CA-201ENST00000323055 ADAMTS2O95450 1211 aa20.5■□□□□ 0.87
PPP3CA-201ENST00000323055 TRIM35Q9UPQ4 493 aa20.5■□□□□ 0.87
PPP3CA-201ENST00000323055 FLT4P35916 1363 aa20.5■□□□□ 0.87
PPP3CA-201ENST00000323055 KDM4AO75164 1064 aa20.5■□□□□ 0.87
PPP3CA-201ENST00000323055 SLC39A6Q13433 755 aa20.5■□□□□ 0.87
PPP3CA-201ENST00000323055 HDAC1Q13547 482 aaPredicted RBP20.5■□□□□ 0.87
PPP3CA-201ENST00000323055 CAVIN1Q6NZI2 390 aaKnown RBP20.5■□□□□ 0.87
PPP3CA-201ENST00000323055 MCM2P49736 904 aa20.49■□□□□ 0.87
PPP3CA-201ENST00000323055 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
PPP3CA-201ENST00000323055 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.49■□□□□ 0.87
PPP3CA-201ENST00000323055 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.49■□□□□ 0.87
PPP3CA-201ENST00000323055 IL13P35225 146 aa20.49■□□□□ 0.87
PPP3CA-201ENST00000323055 JARID2Q92833 1246 aaPredicted RBP20.49■□□□□ 0.87
PPP3CA-201ENST00000323055 HIP1O00291 1037 aa20.49■□□□□ 0.87
PPP3CA-201ENST00000323055 TBC1D2Q9BYX2 928 aa20.49■□□□□ 0.87
PPP3CA-201ENST00000323055 MAP3K2Q9Y2U5 619 aa20.49■□□□□ 0.87
PPP3CA-201ENST00000323055 ZCCHC11Q5TAX3 1644 aaKnown RBP20.49■□□□□ 0.87
PPP3CA-201ENST00000323055 CHMP4CQ96CF2 233 aa20.48■□□□□ 0.87
PPP3CA-201ENST00000323055 CEP126Q9P2H0 1117 aa20.48■□□□□ 0.87
PPP3CA-201ENST00000323055 CCDC8Q9H0W5 538 aaPredicted RBP20.48■□□□□ 0.87
PPP3CA-201ENST00000323055 TBC1D9Q6ZT07 1266 aa20.48■□□□□ 0.87
PPP3CA-201ENST00000323055 RNF214Q8ND24 703 aa20.48■□□□□ 0.87
PPP3CA-201ENST00000323055 BOLA2Q9H3K6 86 aa20.48■□□□□ 0.87
PPP3CA-201ENST00000323055 CHPF2Q9P2E5 772 aa20.48■□□□□ 0.87
PPP3CA-201ENST00000323055 CCDC158Q5M9N0 1113 aa20.48■□□□□ 0.87
PPP3CA-201ENST00000323055 CREBRFQ8IUR6 639 aa20.48■□□□□ 0.87
PPP3CA-201ENST00000323055 STK3Q13188 491 aa20.47■□□□□ 0.87
PPP3CA-201ENST00000323055 PPP1R42Q7Z4L9 355 aa20.47■□□□□ 0.87
PPP3CA-201ENST00000323055 IFNL2Q8IZJ0 200 aa20.47■□□□□ 0.87
PPP3CA-201ENST00000323055 ATP5J2-PTCD1G3V325 749 aa20.47■□□□□ 0.87
PPP3CA-201ENST00000323055 GCP02774 474 aa20.47■□□□□ 0.87
PPP3CA-201ENST00000323055 TMOD3Q9NYL9 352 aa20.47■□□□□ 0.87
PPP3CA-201ENST00000323055 TTC39AQ5SRH9 613 aa20.46■□□□□ 0.87
PPP3CA-201ENST00000323055 CYP46A1Q9Y6A2 500 aa20.46■□□□□ 0.87
PPP3CA-201ENST00000323055 KDM5CP41229 1560 aa20.46■□□□□ 0.87
PPP3CA-201ENST00000323055 BMP2KLQ5H9B9 411 aa20.46■□□□□ 0.87
PPP3CA-201ENST00000323055 FIBPO43427 364 aa20.46■□□□□ 0.87
PPP3CA-201ENST00000323055 ZBTB3Q9H5J0 574 aa20.46■□□□□ 0.87
PPP3CA-201ENST00000323055 CDC42BPAQ5VT25 1732 aa20.46■□□□□ 0.87
PPP3CA-201ENST00000323055 NUCB1Q02818 461 aa20.45■□□□□ 0.86
PPP3CA-201ENST00000323055 TRIM29Q14134 588 aa20.45■□□□□ 0.86
PPP3CA-201ENST00000323055 ORAI2Q96SN7 254 aa20.45■□□□□ 0.86
PPP3CA-201ENST00000323055 HYPKQ9NX55 129 aa20.45■□□□□ 0.86
PPP3CA-201ENST00000323055 TBC1D2BQ9UPU7 963 aa20.45■□□□□ 0.86
PPP3CA-201ENST00000323055 CCDC34Q96HJ3 373 aa20.45■□□□□ 0.86
PPP3CA-201ENST00000323055 ZFYVE9O95405 1425 aa20.45■□□□□ 0.86
PPP3CA-201ENST00000323055 BECN2A8MW95 431 aa20.45■□□□□ 0.86
PPP3CA-201ENST00000323055 GLRX3O76003 335 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms