RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RBBP5Q15291 538 aaKnown RBP11.36□□□□□ -0.59
COL12A1-201ENST00000322507 TACC1O75410 805 aa11.36□□□□□ -0.59
COL12A1-201ENST00000322507 ZWINTO95229 277 aa11.36□□□□□ -0.59
COL12A1-201ENST00000322507 TSPY26PQ9H489 355 aa11.36□□□□□ -0.59
COL12A1-201ENST00000322507 TRIM35Q9UPQ4 493 aa11.36□□□□□ -0.59
COL12A1-201ENST00000322507 PDCD7Q8N8D1 485 aaKnown RBP11.36□□□□□ -0.59
COL12A1-201ENST00000322507 RABGAP1Q9Y3P9 1069 aa11.36□□□□□ -0.59
COL12A1-201ENST00000322507 CCDC50Q8IVM0 306 aa11.36□□□□□ -0.59
COL12A1-201ENST00000322507 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
COL12A1-201ENST00000322507 CDK5RAP3Q96JB5 506 aa11.36□□□□□ -0.59
COL12A1-201ENST00000322507 RRP7AQ9Y3A4 280 aaKnown RBP11.36□□□□□ -0.59
COL12A1-201ENST00000322507 GRIN2BQ13224 1484 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 KRT32Q14532 448 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 SOGA3Q5TF21 947 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 ITSN2Q9NZM3 1697 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 CRACR2AQ9BSW2 395 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 APAF1O14727 1248 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 NACAP1Q9BZK3 213 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL12A1-201ENST00000322507 TIAM1Q13009 1591 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 TRIM5Q9C035 493 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 ZHX1Q9UKY1 873 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-201ENST00000322507 KIF5BP33176 963 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 CCDC38Q502W7 563 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
COL12A1-201ENST00000322507 KIF6Q6ZMV9 814 aa11.34□□□□□ -0.59
COL12A1-201ENST00000322507 FEZ2Q9UHY8 353 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-201ENST00000322507 CCDC102AQ96A19 550 aa11.34□□□□□ -0.59
COL12A1-201ENST00000322507 EXOC6Q8TAG9 804 aa11.34□□□□□ -0.59
COL12A1-201ENST00000322507 FOXD4L5Q5VV16 416 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-201ENST00000322507 FOXD4L4Q8WXT5 416 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-201ENST00000322507 WDR63Q8IWG1 891 aa11.34□□□□□ -0.59
COL12A1-201ENST00000322507 WASF1Q92558 559 aa11.34□□□□□ -0.59
COL12A1-201ENST00000322507 SEPT10Q9P0V9 454 aa11.34□□□□□ -0.59
COL12A1-201ENST00000322507 GNAI2P04899 355 aa11.34□□□□□ -0.59
COL12A1-201ENST00000322507 CCDC158Q5M9N0 1113 aa11.33□□□□□ -0.6
COL12A1-201ENST00000322507 RNF214Q8ND24 703 aa11.33□□□□□ -0.6
COL12A1-201ENST00000322507 UIMC1Q96RL1 719 aa11.33□□□□□ -0.6
COL12A1-201ENST00000322507 KIF20AO95235 890 aa11.33□□□□□ -0.6
COL12A1-201ENST00000322507 ATF3P18847 181 aa11.33□□□□□ -0.6
COL12A1-201ENST00000322507 CCDC97Q96F63 343 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-201ENST00000322507 FAM114A2Q9NRY5 505 aa11.33□□□□□ -0.6
COL12A1-201ENST00000322507 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-201ENST00000322507 CEP120Q8N960 986 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 CC2D2AQ9P2K1 1620 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 BCL2L13Q9BXK5 485 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 RASSF4Q9H2L5 321 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 EIF2S2P20042 333 aaKnown RBP11.32□□□□□ -0.6
COL12A1-201ENST00000322507 KRT85P78386 507 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 A0A1B0GUL7 405 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 SMC2O95347 1197 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 PLEKHO1Q53GL0 409 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-201ENST00000322507 ZNF365Q70YC5 407 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 PPFIBP1Q86W92 1011 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 DHX29Q7Z478 1369 aaKnown RBP11.32□□□□□ -0.6
COL12A1-201ENST00000322507 ANKRD30BQ9BXX2 1392 aa11.32□□□□□ -0.6
COL12A1-201ENST00000322507 ANKS4BQ8N8V4 417 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 SREK1Q8WXA9 508 aaKnown RBP11.31□□□□□ -0.6
COL12A1-201ENST00000322507 FSD1Q9BTV5 496 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 HMGXB3Q12766 1538 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 ZNF287Q9HBT7 754 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 KIF14Q15058 1648 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 ZSCAN31Q96LW9 406 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-201ENST00000322507 ZNF692Q9BU19 519 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-201ENST00000322507 MINK1Q8N4C8 1332 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-201ENST00000322507 MSL1Q68DK7 614 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 ESPNB1AK53 854 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 CAVIN2O95810 425 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 RPGRIP1LQ68CZ1 1315 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 LUC7L2Q9Y383 392 aaKnown RBP11.31□□□□□ -0.6
COL12A1-201ENST00000322507 KIAA1107Q9UPP5 1409 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 TRAK2O60296 914 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 POLE3Q9NRF9 147 aa11.31□□□□□ -0.6
COL12A1-201ENST00000322507 CEP128Q6ZU80 1094 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 FILIP1Q7Z7B0 1213 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 NFKBIBQ15653 356 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 SMAP1Q8IYB5 467 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-201ENST00000322507 NOL7Q9UMY1 257 aaKnown RBP11.3□□□□□ -0.6
COL12A1-201ENST00000322507 CEP131Q9UPN4 1083 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 SLMAPQ14BN4 828 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 MCM5P33992 734 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 BMP2KQ9NSY1 1161 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-201ENST00000322507 ATAD2Q6PL18 1390 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 C9orf84Q5VXU9 1444 aa11.3□□□□□ -0.6
COL12A1-201ENST00000322507 SMTNL1A8MU46 457 aa11.29□□□□□ -0.6
COL12A1-201ENST00000322507 WHAMMP3Q1A5X7 153 aa11.29□□□□□ -0.6
COL12A1-201ENST00000322507 ANKRD62A6NC57 917 aa11.29□□□□□ -0.6
COL12A1-201ENST00000322507 GMNNO75496 209 aa11.29□□□□□ -0.6
COL12A1-201ENST00000322507 ZNF853P0CG23 659 aa11.29□□□□□ -0.6
COL12A1-201ENST00000322507 RNF187Q5TA31 235 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-201ENST00000322507 PPFIA2O75334 1257 aa11.29□□□□□ -0.6
COL12A1-201ENST00000322507 SLC52A1Q9NWF4 448 aa11.29□□□□□ -0.6
COL12A1-201ENST00000322507 CEP104O60308 925 aa11.29□□□□□ -0.6
COL12A1-201ENST00000322507 RAB3IL1Q8TBN0 382 aa11.29□□□□□ -0.6
COL12A1-201ENST00000322507 KRT222Q8N1A0 295 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 BRPF3Q9ULD4 1205 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms