RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 NSD2O96028 1365 aa27.87■■■□□ 2.05
SSNA1-201ENST00000322310 ANKRD36BQ8N2N9 1353 aa27.87■■■□□ 2.05
SSNA1-201ENST00000322310 FAM208AQ9UK61 1670 aaKnown RBP27.86■■■□□ 2.05
SSNA1-201ENST00000322310 LY75O60449 1722 aa27.85■■■□□ 2.05
SSNA1-201ENST00000322310 YBX3P16989 372 aaKnown RBP eCLIP27.85■■■□□ 2.053e-6■□□□□ 9.7
SSNA1-201ENST00000322310 CARD11Q9BXL7 1154 aa27.85■■■□□ 2.05
SSNA1-201ENST00000322310 TERF2IPQ9NYB0 399 aa27.85■■■□□ 2.05
SSNA1-201ENST00000322310 CEP350Q5VT06 3117 aa27.83■■■□□ 2.04
SSNA1-201ENST00000322310 MSH5O43196 834 aa27.82■■■□□ 2.04
SSNA1-201ENST00000322310 CCNL1Q9UK58 526 aaPredicted RBP27.82■■■□□ 2.04
SSNA1-201ENST00000322310 FBLN1P23142 703 aa27.81■■■□□ 2.04
SSNA1-201ENST00000322310 MAP3K19Q56UN5 1328 aa27.81■■■□□ 2.04
SSNA1-201ENST00000322310 MEGF6O75095 1541 aa27.81■■■□□ 2.04
SSNA1-201ENST00000322310 COL23A1Q86Y22 540 aaPredicted RBP27.8■■■□□ 2.04
SSNA1-201ENST00000322310 ZCRB1Q8TBF4 217 aaKnown RBP27.8■■■□□ 2.04
SSNA1-201ENST00000322310 HOXC9P31274 260 aa27.79■■■□□ 2.04
SSNA1-201ENST00000322310 MSL1Q68DK7 614 aa27.79■■■□□ 2.04
SSNA1-201ENST00000322310 RGPD2P0DJD1 1756 aa27.78■■■□□ 2.04
SSNA1-201ENST00000322310 GRIN3BO60391 1043 aa27.77■■■□□ 2.04
SSNA1-201ENST00000322310 AMPHP49418 695 aa27.76■■■□□ 2.03
SSNA1-201ENST00000322310 IFFO2Q5TF58 517 aa27.76■■■□□ 2.03
SSNA1-201ENST00000322310 COG3Q96JB2 828 aa27.75■■■□□ 2.03
SSNA1-201ENST00000322310 USP47Q96K76 1375 aa27.74■■■□□ 2.03
SSNA1-201ENST00000322310 ATP10DQ9P241 1426 aa27.73■■■□□ 2.03
SSNA1-201ENST00000322310 USHBP1Q8N6Y0 703 aa27.71■■■□□ 2.03
SSNA1-201ENST00000322310 NBPF6Q5VWK0 638 aa27.7■■■□□ 2.02
SSNA1-201ENST00000322310 NBPF4Q96M43 638 aa27.7■■■□□ 2.02
SSNA1-201ENST00000322310 PUS7Q96PZ0 661 aaKnown RBP27.7■■■□□ 2.02
SSNA1-201ENST00000322310 RRS1Q15050 365 aaKnown RBP27.68■■■□□ 2.02
SSNA1-201ENST00000322310 C5P01031 1676 aa27.68■■■□□ 2.02
SSNA1-201ENST00000322310 RTL1A6NKG5 1358 aa27.65■■■□□ 2.02
SSNA1-201ENST00000322310 CD2APQ9Y5K6 639 aa27.65■■■□□ 2.02
SSNA1-201ENST00000322310 RAPGEF4Q8WZA2 1011 aa27.64■■■□□ 2.02
SSNA1-201ENST00000322310 TESK2Q96S53 571 aa27.64■■■□□ 2.02
SSNA1-201ENST00000322310 GPBP1L1Q9HC44 474 aaPredicted RBP27.63■■■□□ 2.01
SSNA1-201ENST00000322310 CGNL1Q0VF96 1302 aa27.63■■■□□ 2.01
SSNA1-201ENST00000322310 PALLDQ8WX93 1383 aa27.62■■■□□ 2.01
SSNA1-201ENST00000322310 ZNF526Q8TF50 670 aaPredicted RBP27.62■■■□□ 2.01
SSNA1-201ENST00000322310 ADCY9O60503 1353 aa27.6■■■□□ 2.01
SSNA1-201ENST00000322310 SMG6Q86US8 1419 aaKnown RBP27.6■■■□□ 2.01
SSNA1-201ENST00000322310 ST20-MTHFSA0A0A6YYL1 179 aa27.6■■■□□ 2.01
SSNA1-201ENST00000322310 TATP17735 454 aaPredicted RBP27.6■■■□□ 2.01
SSNA1-201ENST00000322310 MPRIPQ6WCQ1 1025 aa27.6■■■□□ 2.01
SSNA1-201ENST00000322310 AMIGO3Q86WK7 504 aa27.6■■■□□ 2.01
SSNA1-201ENST00000322310 WWC3Q9ULE0 1092 aa27.6■■■□□ 2.01
SSNA1-201ENST00000322310 FLAD1Q8NFF5 587 aa27.59■■■□□ 2.01
SSNA1-201ENST00000322310 GGNBP2Q9H3C7 697 aa27.59■■■□□ 2.01
SSNA1-201ENST00000322310 TAF1LQ8IZX4 1826 aa27.59■■■□□ 2.01
SSNA1-201ENST00000322310 PCDH11XQ9BZA7 1347 aa27.59■■■□□ 2.01
SSNA1-201ENST00000322310 PCDH11YQ9BZA8 1340 aa27.59■■■□□ 2.01
SSNA1-201ENST00000322310 SMIM5Q71RC9 77 aa27.58■■■□□ 2.01
SSNA1-201ENST00000322310 FYB1O15117 783 aa27.57■■■□□ 2
SSNA1-201ENST00000322310 C4BP0C0L5 1744 aa27.56■■■□□ 2
SSNA1-201ENST00000322310 HSP90AB2PQ58FF8 381 aa27.56■■■□□ 2
SSNA1-201ENST00000322310 TONSLQ96HA7 1378 aa27.56■■■□□ 2
SSNA1-201ENST00000322310 TOGARAM1Q9Y4F4 1720 aa27.55■■■□□ 2
SSNA1-201ENST00000322310 CYP27B1O15528 508 aa27.55■■■□□ 2
SSNA1-201ENST00000322310 AK7Q96M32 723 aa27.55■■■□□ 2
SSNA1-201ENST00000322310 PHF14O94880 888 aa27.54■■■□□ 2
SSNA1-201ENST00000322310 HSPA6P17066 643 aa27.54■■■□□ 2
SSNA1-201ENST00000322310 IGSF1Q8N6C5 1336 aa27.54■■■□□ 2
SSNA1-201ENST00000322310 INSRP06213 1382 aa27.53■■■□□ 2
SSNA1-201ENST00000322310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.5■■□□□ 1.99
SSNA1-201ENST00000322310 HMGB2P26583 209 aaKnown RBP27.5■■□□□ 1.99
SSNA1-201ENST00000322310 FLT4P35916 1363 aa27.49■■□□□ 1.99
SSNA1-201ENST00000322310 UBR3Q6ZT12 1888 aa27.49■■□□□ 1.99
SSNA1-201ENST00000322310 ITGB4P16144 1822 aa27.49■■□□□ 1.99
SSNA1-201ENST00000322310 SMARCC1Q92922 1105 aaPredicted RBP27.49■■□□□ 1.99
SSNA1-201ENST00000322310 PIGBQ92521 554 aa27.48■■□□□ 1.99
SSNA1-201ENST00000322310 LINC00116Q8NCU8 138 aa27.45■■□□□ 1.98
SSNA1-201ENST00000322310 PKD1L3Q7Z443 1732 aa27.44■■□□□ 1.98
SSNA1-201ENST00000322310 NSD3Q9BZ95 1437 aa27.44■■□□□ 1.98
SSNA1-201ENST00000322310 SLC24A1O60721 1099 aa27.44■■□□□ 1.98
SSNA1-201ENST00000322310 KIF3CO14782 793 aa27.43■■□□□ 1.98
SSNA1-201ENST00000322310 SSFA2P28290 1259 aa27.43■■□□□ 1.98
SSNA1-201ENST00000322310 EMILIN1Q9Y6C2 1016 aa27.43■■□□□ 1.98
SSNA1-201ENST00000322310 KIF20BQ96Q89 1820 aa27.43■■□□□ 1.98
SSNA1-201ENST00000322310 MAP2P11137 1827 aaKnown RBP27.42■■□□□ 1.98
SSNA1-201ENST00000322310 LOC102724428A0A0B4J2F2 783 aa27.42■■□□□ 1.98
SSNA1-201ENST00000322310 SIK1P57059 783 aa27.42■■□□□ 1.98
SSNA1-201ENST00000322310 KIF24Q5T7B8 1368 aa27.42■■□□□ 1.98
SSNA1-201ENST00000322310 NKX1-1Q15270 411 aaPredicted RBP27.4■■□□□ 1.98
SSNA1-201ENST00000322310 GNPATO15228 680 aa27.39■■□□□ 1.98
SSNA1-201ENST00000322310 TMF1P82094 1093 aa27.39■■□□□ 1.98
SSNA1-201ENST00000322310 ITPK1Q13572 414 aa27.39■■□□□ 1.98
SSNA1-201ENST00000322310 ASAP1Q9ULH1 1129 aa27.38■■□□□ 1.97
SSNA1-201ENST00000322310 NCAPD2Q15021 1401 aa27.38■■□□□ 1.97
SSNA1-201ENST00000322310 CICQ96RK0 1608 aaPredicted RBP27.37■■□□□ 1.97
SSNA1-201ENST00000322310 PPM1GO15355 546 aaPredicted RBP27.36■■□□□ 1.97
SSNA1-201ENST00000322310 TMOD3Q9NYL9 352 aa27.36■■□□□ 1.97
SSNA1-201ENST00000322310 SPG7Q9UQ90 795 aa27.36■■□□□ 1.97
SSNA1-201ENST00000322310 MMP10P09238 476 aa27.35■■□□□ 1.97
SSNA1-201ENST00000322310 PXDNLA1KZ92 1463 aa27.35■■□□□ 1.97
SSNA1-201ENST00000322310 ATP6V1AP38606 617 aa27.34■■□□□ 1.97
SSNA1-201ENST00000322310 CARD14Q9BXL6 1004 aa27.34■■□□□ 1.97
SSNA1-201ENST00000322310 KIAA1551Q9HCM1 1747 aa27.31■■□□□ 1.96
SSNA1-201ENST00000322310 EYA1Q99502 592 aa27.3■■□□□ 1.96
SSNA1-201ENST00000322310 ATG3Q9NT62 314 aa27.3■■□□□ 1.96
SSNA1-201ENST00000322310 BCS1LQ9Y276 419 aa27.3■■□□□ 1.96
SSNA1-201ENST00000322310 A0A0G2JLW4 131 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms