RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CDC42BPBQ9Y5S2 1711 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 ERLIN2O94905 339 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 IFIT2P09913 472 aaKnown RBP8.3□□□□□ -1.08
SMC1A-201ENST00000322213 SPATA32Q96LK8 384 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 DNAAF4Q8WXU2 420 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 SLC26A8Q96RN1 970 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 DACH1Q9UI36 760 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 GOLGA6L9A6NEM1 432 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 FILIP1LQ4L180 1135 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 CENPHQ9H3R5 247 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 POLR3GO15318 223 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-201ENST00000322213 DHX16O60231 1041 aaKnown RBP8.3□□□□□ -1.08
SMC1A-201ENST00000322213 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-201ENST00000322213 UBE2HP62256 183 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 EPRSP07814 1512 aaKnown RBP8.3□□□□□ -1.08
SMC1A-201ENST00000322213 SYNMO15061 1565 aa8.3□□□□□ -1.08
SMC1A-201ENST00000322213 RBM28Q9NW13 759 aaKnown RBP8.3□□□□□ -1.08
SMC1A-201ENST00000322213 SLFN5Q08AF3 891 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 PPFIBP1Q86W92 1011 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 MPNDQ8N594 471 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 PDS5BQ9NTI5 1447 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 ZMYM3Q14202 1370 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 GOLGA6L10A0A0M3HER8 536 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 SMTNL1A8MU46 457 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 SPHKAPQ2M3C7 1700 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 JAKMIP3Q5VZ66 844 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 CT47A1Q5JQC4 288 aaPredicted RBP8.29□□□□□ -1.08
SMC1A-201ENST00000322213 SNX21Q969T3 373 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 RBM33Q96EV2 1170 aaKnown RBP8.29□□□□□ -1.08
SMC1A-201ENST00000322213 NF2P35240 595 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 LMAN1P49257 510 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 RAB3GAP1Q15042 981 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 ARFGAP3Q9NP61 516 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 TUBB4BP68371 445 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 SAFBQ15424 915 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMC1A-201ENST00000322213 CNPY4Q8N129 248 aa8.29□□□□□ -1.08
SMC1A-201ENST00000322213 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMC1A-201ENST00000322213 ZNF397Q8NF99 534 aaPredicted RBP8.29□□□□□ -1.08
SMC1A-201ENST00000322213 DLG5Q8TDM6 1919 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 CTAGE5O15320 804 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 ZNF428Q96B54 188 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 LUC7LQ9NQ29 371 aaKnown RBP8.28□□□□□ -1.08
SMC1A-201ENST00000322213 CYP46A1Q9Y6A2 500 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 BCORL1Q5H9F3 1711 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 ODF2Q5BJF6 829 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 C20orf194Q5TEA3 1177 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 USP25Q9UHP3 1055 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 CCDC148Q8NFR7 591 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 UPF3BQ9BZI7 483 aaKnown RBP8.28□□□□□ -1.08
SMC1A-201ENST00000322213 SSFA2P28290 1259 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 CCDC47Q96A33 483 aaKnown RBP8.28□□□□□ -1.08
SMC1A-201ENST00000322213 ME1P48163 572 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 SNW1Q13573 536 aaKnown RBP8.28□□□□□ -1.08
SMC1A-201ENST00000322213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.28□□□□□ -1.08
SMC1A-201ENST00000322213 STX1AQ16623 288 aa8.28□□□□□ -1.08
SMC1A-201ENST00000322213 KIF5CO60282 957 aa8.27□□□□□ -1.08
SMC1A-201ENST00000322213 BMP2KLQ5H9B9 411 aa8.27□□□□□ -1.08
SMC1A-201ENST00000322213 SCAND2PQ9GZW5 306 aaPredicted RBP8.27□□□□□ -1.08
SMC1A-201ENST00000322213 ZNHIT6Q9NWK9 470 aaKnown RBP8.27□□□□□ -1.08
SMC1A-201ENST00000322213 TUBB4AP04350 444 aa8.27□□□□□ -1.08
SMC1A-201ENST00000322213 FAM177A1Q8N128 213 aaPredicted RBP8.27□□□□□ -1.08
SMC1A-201ENST00000322213 C9orf78Q9NZ63 289 aaPredicted RBP8.27□□□□□ -1.08
SMC1A-201ENST00000322213 DIAPH1O60610 1272 aaKnown RBP8.27□□□□□ -1.09
SMC1A-201ENST00000322213 ABCC11Q96J66 1382 aa8.27□□□□□ -1.09
SMC1A-201ENST00000322213 CDC42BPAQ5VT25 1732 aa8.27□□□□□ -1.09
SMC1A-201ENST00000322213 DHX37Q8IY37 1157 aaKnown RBP8.27□□□□□ -1.09
SMC1A-201ENST00000322213 CCDC150Q8NCX0 1101 aa8.27□□□□□ -1.09
SMC1A-201ENST00000322213 TRPM1Q7Z4N2 1603 aa8.27□□□□□ -1.09
SMC1A-201ENST00000322213 SRRTQ9BXP5 876 aaKnown RBP8.27□□□□□ -1.09
SMC1A-201ENST00000322213 EPS15P42566 896 aa8.27□□□□□ -1.09
SMC1A-201ENST00000322213 LARP1BQ659C4 914 aaKnown RBP8.27□□□□□ -1.09
SMC1A-201ENST00000322213 BANK1Q8NDB2 785 aa8.27□□□□□ -1.09
SMC1A-201ENST00000322213 GTF2E1P29083 439 aaPredicted RBP8.26□□□□□ -1.09
SMC1A-201ENST00000322213 CDK13Q14004 1512 aaKnown RBP8.26□□□□□ -1.09
SMC1A-201ENST00000322213 ANKRD30BQ9BXX2 1392 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 PLCD4Q9BRC7 762 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 E9PCH4 1651 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 TRDNQ13061 729 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 TCP11L2Q8N4U5 519 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 LRRFIP2Q9Y608 721 aaKnown RBP8.26□□□□□ -1.09
SMC1A-201ENST00000322213 BLMP54132 1417 aaPredicted RBP8.26□□□□□ -1.09
SMC1A-201ENST00000322213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMC1A-201ENST00000322213 TRERF1Q96PN7 1200 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 PPP6R1Q9UPN7 881 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 FMNL2Q96PY5 1086 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 STK26Q9P289 416 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 QRICH2Q9H0J4 1663 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 A0A1B0GUL7 405 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 EZRP15311 586 aaKnown RBP8.26□□□□□ -1.09
SMC1A-201ENST00000322213 KIAA1328Q86T90 577 aa8.26□□□□□ -1.09
SMC1A-201ENST00000322213 ZFP91Q96JP5 570 aaPredicted RBP8.26□□□□□ -1.09
SMC1A-201ENST00000322213 BRMS1Q9HCU9 246 aa8.25□□□□□ -1.09
SMC1A-201ENST00000322213 PLXNC1O60486 1568 aa8.25□□□□□ -1.09
SMC1A-201ENST00000322213 HDGFP51858 240 aaKnown RBP8.25□□□□□ -1.09
SMC1A-201ENST00000322213 ARHGAP29Q52LW3 1261 aa8.25□□□□□ -1.09
SMC1A-201ENST00000322213 CCDC181Q5TID7 509 aa8.25□□□□□ -1.09
SMC1A-201ENST00000322213 ZSCAN31Q96LW9 406 aaPredicted RBP8.25□□□□□ -1.09
SMC1A-201ENST00000322213 SH2B1Q9NRF2 756 aaPredicted RBP8.25□□□□□ -1.09
SMC1A-201ENST00000322213 CFAP74Q9C0B2 1584 aa8.25□□□□□ -1.09
SMC1A-201ENST00000322213 CASTP20810 708 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms