RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 MCM5P33992 734 aa15.33■□□□□ 0.04
DNMT3A-202ENST00000321117 ZMYND15Q9H091 742 aa15.33■□□□□ 0.04
DNMT3A-202ENST00000321117 ZNF518AQ6AHZ1 1483 aa15.33■□□□□ 0.04
DNMT3A-202ENST00000321117 PTPRCP08575 1304 aa15.33■□□□□ 0.04
DNMT3A-202ENST00000321117 ATP7AQ04656 1500 aa15.33■□□□□ 0.04
DNMT3A-202ENST00000321117 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 MEIS3Q99687 375 aa15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 TPM3P06753 285 aa15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 LAMC1P11047 1609 aa15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 OFD1O75665 1012 aa15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 RNF20Q5VTR2 975 aa15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 SASS6Q6UVJ0 657 aa15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 GAS2L3Q86XJ1 694 aa15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 CLASRPQ8N2M8 674 aaKnown RBP15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 ZGPATQ8N5A5 531 aaKnown RBP15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 TMX3Q96JJ7 454 aa15.32■□□□□ 0.04
DNMT3A-202ENST00000321117 BECN2A8MW95 431 aa15.31■□□□□ 0.04
DNMT3A-202ENST00000321117 MAP4K4O95819 1239 aaPredicted RBP15.31■□□□□ 0.04
DNMT3A-202ENST00000321117 USP26Q9BXU7 913 aa15.31■□□□□ 0.04
DNMT3A-202ENST00000321117 GDPD2Q9HCC8 539 aa15.31■□□□□ 0.04
DNMT3A-202ENST00000321117 KIF3AQ9Y496 699 aa15.31■□□□□ 0.04
DNMT3A-202ENST00000321117 E9PCH4 1651 aa15.31■□□□□ 0.04
DNMT3A-202ENST00000321117 HS1BP3Q53T59 392 aa15.3■□□□□ 0.04
DNMT3A-202ENST00000321117 HDGFL1Q5TGJ6 251 aa15.3■□□□□ 0.04
DNMT3A-202ENST00000321117 SPC24Q8NBT2 197 aa15.3■□□□□ 0.04
DNMT3A-202ENST00000321117 PLXNC1O60486 1568 aa15.3■□□□□ 0.04
DNMT3A-202ENST00000321117 TSHZ3Q63HK5 1081 aa15.3■□□□□ 0.04
DNMT3A-202ENST00000321117 ZNF592Q92610 1267 aa15.3■□□□□ 0.04
DNMT3A-202ENST00000321117 ZKSCAN5Q9Y2L8 839 aa15.29■□□□□ 0.04
DNMT3A-202ENST00000321117 ZFYVE9O95405 1425 aa15.29■□□□□ 0.04
DNMT3A-202ENST00000321117 WASLO00401 505 aaPredicted RBP15.29■□□□□ 0.04
DNMT3A-202ENST00000321117 PDE1AP54750 535 aa15.29■□□□□ 0.04
DNMT3A-202ENST00000321117 FBXO31Q5XUX0 539 aaPredicted RBP15.29■□□□□ 0.04
DNMT3A-202ENST00000321117 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
DNMT3A-202ENST00000321117 MYOM2P54296 1465 aa15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 CCDC192P0DO97 292 aa15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 CDK11BP21127 795 aaKnown RBP15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 G3BP1Q13283 466 aaKnown RBP eCLIP15.28■□□□□ 0.044e-6■□□□□ 9.2
DNMT3A-202ENST00000321117 USP25Q9UHP3 1055 aa15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 NLRP6P59044 892 aa15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 CEP85Q6P2H3 762 aa15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 NUTM1Q86Y26 1132 aa15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 CFAP65Q6ZU64 1925 aaKnown RBP15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 PDCP20941 246 aa15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 CCDC183Q5T5S1 534 aa15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 UGGT1Q9NYU2 1555 aa15.28■□□□□ 0.04
DNMT3A-202ENST00000321117 ZNF445P59923 1031 aa15.27■□□□□ 0.04
DNMT3A-202ENST00000321117 RBSNQ9H1K0 784 aa15.27■□□□□ 0.04
DNMT3A-202ENST00000321117 CYP46A1Q9Y6A2 500 aa15.27■□□□□ 0.04
DNMT3A-202ENST00000321117 SRGAP3O43295 1099 aa15.27■□□□□ 0.04
DNMT3A-202ENST00000321117 AEBP1Q8IUX7 1158 aa15.27■□□□□ 0.04
DNMT3A-202ENST00000321117 TRIM5Q9C035 493 aa15.27■□□□□ 0.04
DNMT3A-202ENST00000321117 TPM4P67936 248 aa15.27■□□□□ 0.03
DNMT3A-202ENST00000321117 OTUD7AQ8TE49 926 aaPredicted RBP15.27■□□□□ 0.03
DNMT3A-202ENST00000321117 MADDQ8WXG6 1647 aa15.26■□□□□ 0.03
DNMT3A-202ENST00000321117 CWC27Q6UX04 472 aaKnown RBP15.26■□□□□ 0.03
DNMT3A-202ENST00000321117 PSMA5P28066 241 aa15.26■□□□□ 0.03
DNMT3A-202ENST00000321117 SF3A1Q15459 793 aaKnown RBP15.26■□□□□ 0.03
DNMT3A-202ENST00000321117 DYNC1I1O14576 645 aa15.26■□□□□ 0.03
DNMT3A-202ENST00000321117 NUTM2GQ5VZR2 741 aa15.26■□□□□ 0.03
DNMT3A-202ENST00000321117 CD2BP2O95400 341 aaKnown RBP15.25■□□□□ 0.03
DNMT3A-202ENST00000321117 KRT24Q2M2I5 525 aa15.25■□□□□ 0.03
DNMT3A-202ENST00000321117 KRT85P78386 507 aa15.25■□□□□ 0.03
DNMT3A-202ENST00000321117 ESYT1Q9BSJ8 1104 aa15.25■□□□□ 0.03
DNMT3A-202ENST00000321117 ABCC1P33527 1531 aa15.25■□□□□ 0.03
DNMT3A-202ENST00000321117 CDC42BPBQ9Y5S2 1711 aa15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 GNL2Q13823 731 aaKnown RBP15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 C1orf141Q5JVX7 400 aa15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 JAKMIP1Q96N16 626 aaKnown RBP15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 LMBRD1Q9NUN5 540 aa15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 LRRFIP2Q9Y608 721 aaKnown RBP15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 LARP1BQ659C4 914 aaKnown RBP15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 PPP1R9BQ96SB3 815 aa15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 NOL7Q9UMY1 257 aaKnown RBP15.24■□□□□ 0.03
DNMT3A-202ENST00000321117 ASXL2Q76L83 1435 aa15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 GSPT1P15170 499 aaKnown RBP15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 CASTP20810 708 aaKnown RBP15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 ZNF771Q7L3S4 317 aaPredicted RBP15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 NEXNQ0ZGT2 675 aa15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 FLIIQ13045 1269 aa15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 PDRG1Q9NUG6 133 aa15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 FSD1Q9BTV5 496 aa15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 ANAPC15P60006 121 aa15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 KIF1BPQ96EK5 621 aa15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 ZSCAN31Q96LW9 406 aaPredicted RBP15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 CCDC9Q9Y3X0 531 aaKnown RBP15.23■□□□□ 0.03
DNMT3A-202ENST00000321117 PPIP5K1Q6PFW1 1433 aa15.22■□□□□ 0.03
DNMT3A-202ENST00000321117 DDX58O95786 925 aaKnown RBP15.22■□□□□ 0.03
DNMT3A-202ENST00000321117 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
DNMT3A-202ENST00000321117 CCDC83Q8IWF9 413 aa15.22■□□□□ 0.03
DNMT3A-202ENST00000321117 CLTCL1P53675 1640 aa15.22■□□□□ 0.03
DNMT3A-202ENST00000321117 ADCY5O95622 1261 aa15.22■□□□□ 0.03
DNMT3A-202ENST00000321117 FAM69CQ0P6D2 419 aa15.22■□□□□ 0.03
DNMT3A-202ENST00000321117 LIMCH1Q9UPQ0 1083 aa15.22■□□□□ 0.03
DNMT3A-202ENST00000321117 ABCC4O15439 1325 aa15.22■□□□□ 0.03
DNMT3A-202ENST00000321117 TNMDQ9H2S6 317 aa15.22■□□□□ 0.03
DNMT3A-202ENST00000321117 HCLS1P14317 486 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms