RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SMC1AQ14683 1233 aaKnown RBP19.72■□□□□ 0.75
SMCHD1-201ENST00000320876 TWISTNBQ3B726 338 aaPredicted RBP19.72■□□□□ 0.75
SMCHD1-201ENST00000320876 TCP11L2Q8N4U5 519 aa19.71■□□□□ 0.75
SMCHD1-201ENST00000320876 SOGA3Q5TF21 947 aa19.71■□□□□ 0.75
SMCHD1-201ENST00000320876 FEZ1Q99689 392 aa19.71■□□□□ 0.75
SMCHD1-201ENST00000320876 TICAM2Q86XR7 235 aa19.71■□□□□ 0.75
SMCHD1-201ENST00000320876 CCDC83Q8IWF9 413 aa19.71■□□□□ 0.75
SMCHD1-201ENST00000320876 ARHGAP5Q13017 1502 aa19.71■□□□□ 0.75
SMCHD1-201ENST00000320876 CTNNA3Q9UI47 895 aa19.71■□□□□ 0.75
SMCHD1-201ENST00000320876 MVPQ14764 893 aaKnown RBP19.7■□□□□ 0.74
SMCHD1-201ENST00000320876 ERICH3Q5RHP9 1530 aa19.7■□□□□ 0.74
SMCHD1-201ENST00000320876 CNNM1Q9NRU3 951 aa19.7■□□□□ 0.74
SMCHD1-201ENST00000320876 CCDC113Q9H0I3 377 aa19.7■□□□□ 0.74
SMCHD1-201ENST00000320876 PRKCSHP14314 528 aaPredicted RBP19.7■□□□□ 0.74
SMCHD1-201ENST00000320876 NEMFO60524 1076 aa19.7■□□□□ 0.74
SMCHD1-201ENST00000320876 LRRC9Q6ZRR7 1453 aa19.7■□□□□ 0.74
SMCHD1-201ENST00000320876 CASTP20810 708 aaKnown RBP19.7■□□□□ 0.74
SMCHD1-201ENST00000320876 MTHFSP49914 203 aa19.69■□□□□ 0.74
SMCHD1-201ENST00000320876 GIGYF2Q6Y7W6 1299 aaKnown RBP19.69■□□□□ 0.74
SMCHD1-201ENST00000320876 PRDM10Q9NQV6 1147 aa19.68■□□□□ 0.74
SMCHD1-201ENST00000320876 CCDC175P0C221 793 aa19.68■□□□□ 0.74
SMCHD1-201ENST00000320876 MCM5P33992 734 aa19.68■□□□□ 0.74
SMCHD1-201ENST00000320876 NEBLO76041 1014 aa19.68■□□□□ 0.74
SMCHD1-201ENST00000320876 ANAPC15P60006 121 aa19.68■□□□□ 0.74
SMCHD1-201ENST00000320876 DNAI2Q9GZS0 605 aa19.68■□□□□ 0.74
SMCHD1-201ENST00000320876 CLIP2Q9UDT6 1046 aa19.68■□□□□ 0.74
SMCHD1-201ENST00000320876 TAOK3Q9H2K8 898 aa19.68■□□□□ 0.74
SMCHD1-201ENST00000320876 ANO10Q9NW15 660 aa19.68■□□□□ 0.74
SMCHD1-201ENST00000320876 FKBP15Q5T1M5 1219 aa19.67■□□□□ 0.74
SMCHD1-201ENST00000320876 NUP133Q8WUM0 1156 aa19.67■□□□□ 0.74
SMCHD1-201ENST00000320876 SSR1P43307 286 aaKnown RBP19.67■□□□□ 0.74
SMCHD1-201ENST00000320876 DYNC1I1O14576 645 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 CAMK4Q16566 473 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 CTR9Q6PD62 1173 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 ATF7IPQ6VMQ6 1270 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 UBAC1Q9BSL1 405 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 GOPCQ9HD26 462 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 JAKMIP1Q96N16 626 aaKnown RBP19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 CTAGE5O15320 804 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 GSDMDP57764 484 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 SCAND2PQ9GZW5 306 aaPredicted RBP19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 HECW1Q76N89 1606 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 FGFR1OPO95684 399 aaKnown RBP19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 SPECC1LQ69YQ0 1117 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 RNF187Q5TA31 235 aaPredicted RBP19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 WDR63Q8IWG1 891 aa19.66■□□□□ 0.74
SMCHD1-201ENST00000320876 ATP2B2Q01814 1243 aa19.65■□□□□ 0.74
SMCHD1-201ENST00000320876 GOLGA6L9A6NEM1 432 aa19.65■□□□□ 0.74
SMCHD1-201ENST00000320876 TOP1P11387 765 aaKnown RBP19.65■□□□□ 0.74
SMCHD1-201ENST00000320876 MATR3P43243 847 aaKnown RBP eCLIP19.65■□□□□ 0.741e-6■■■■□ 22.9
SMCHD1-201ENST00000320876 GPATCH11Q8N954 259 aa19.65■□□□□ 0.74
SMCHD1-201ENST00000320876 NAA15Q9BXJ9 866 aaKnown RBP19.65■□□□□ 0.74
SMCHD1-201ENST00000320876 PPP2R1AP30153 589 aa19.65■□□□□ 0.74
SMCHD1-201ENST00000320876 CDCA7LQ96GN5 454 aa19.65■□□□□ 0.74
SMCHD1-201ENST00000320876 ALS2CR12Q96Q35 445 aa19.64■□□□□ 0.74
SMCHD1-201ENST00000320876 POLR3GO15318 223 aaPredicted RBP19.64■□□□□ 0.74
SMCHD1-201ENST00000320876 CCDC178Q5BJE1 867 aa19.64■□□□□ 0.73
SMCHD1-201ENST00000320876 GSTTP1A0A1W2PQM5 241 aa19.64■□□□□ 0.73
SMCHD1-201ENST00000320876 MEX3CQ5U5Q3 659 aaKnown RBP19.64■□□□□ 0.73
SMCHD1-201ENST00000320876 CWC27Q6UX04 472 aaKnown RBP19.64■□□□□ 0.73
SMCHD1-201ENST00000320876 RAI14Q9P0K7 980 aa19.64■□□□□ 0.73
SMCHD1-201ENST00000320876 SLC4A2P04920 1241 aa19.63■□□□□ 0.73
SMCHD1-201ENST00000320876 PPP4R3BQ5MIZ7 849 aa19.63■□□□□ 0.73
SMCHD1-201ENST00000320876 AACSQ86V21 672 aa19.63■□□□□ 0.73
SMCHD1-201ENST00000320876 EXOSC9Q06265 439 aaKnown RBP19.63■□□□□ 0.73
SMCHD1-201ENST00000320876 ANKRD18BA2A2Z9 1011 aa19.63■□□□□ 0.73
SMCHD1-201ENST00000320876 PRKAR2BP31323 418 aa19.63■□□□□ 0.73
SMCHD1-201ENST00000320876 TSG101Q99816 390 aa19.63■□□□□ 0.73
SMCHD1-201ENST00000320876 KIF4BQ2VIQ3 1234 aa19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 TIGD1Q96MW7 591 aa19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 NUP88Q99567 741 aaPredicted RBP19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 ANKRD50Q9ULJ7 1429 aa19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 USO1O60763 962 aaKnown RBP19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 EHBP1L1Q8N3D4 1523 aa19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 PLEKHO1Q53GL0 409 aaPredicted RBP19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 NLRP2Q9NX02 1062 aa19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 C16orf45Q96MC5 204 aaPredicted RBP19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 PHAXQ9H814 394 aaKnown RBP19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 PAXBP1Q9Y5B6 917 aa19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 GPRASP1Q5JY77 1395 aa19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 MAP4K4O95819 1239 aaPredicted RBP19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 HOOK3Q86VS8 718 aa19.62■□□□□ 0.73
SMCHD1-201ENST00000320876 SSBP05455 408 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMCHD1-201ENST00000320876 TDO2P48775 406 aa19.61■□□□□ 0.73
SMCHD1-201ENST00000320876 GGNBP2Q9H3C7 697 aa19.61■□□□□ 0.73
SMCHD1-201ENST00000320876 PAFAH1B1P43034 410 aa19.61■□□□□ 0.73
SMCHD1-201ENST00000320876 SMARCC1Q92922 1105 aaPredicted RBP19.61■□□□□ 0.73
SMCHD1-201ENST00000320876 CABP2Q9NPB3 220 aa19.61■□□□□ 0.73
SMCHD1-201ENST00000320876 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
SMCHD1-201ENST00000320876 HDGFL1Q5TGJ6 251 aa19.61■□□□□ 0.73
SMCHD1-201ENST00000320876 CACNA2D4Q7Z3S7 1137 aa19.61■□□□□ 0.73
SMCHD1-201ENST00000320876 TNNT1P13805 278 aa19.6■□□□□ 0.73
SMCHD1-201ENST00000320876 URI1O94763 535 aaPredicted RBP19.6■□□□□ 0.73
SMCHD1-201ENST00000320876 C6orf163Q5TEZ5 329 aa19.6■□□□□ 0.73
SMCHD1-201ENST00000320876 SIL1Q9H173 461 aa19.6■□□□□ 0.73
SMCHD1-201ENST00000320876 SH2B1Q9NRF2 756 aaPredicted RBP19.6■□□□□ 0.73
SMCHD1-201ENST00000320876 BCCIPQ9P287 314 aaKnown RBP eCLIP19.6■□□□□ 0.73
SMCHD1-201ENST00000320876 FKBP4Q02790 459 aaKnown RBP eCLIP19.6■□□□□ 0.73
SMCHD1-201ENST00000320876 BBXQ8WY36 941 aaPredicted RBP19.6■□□□□ 0.73
SMCHD1-201ENST00000320876 WDR97A6NE52 1622 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms