RNA–Protein interactions for RNA: ENST00000320161.10

SGIP1-202, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 680 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-202ENST00000320161 CD163L1Q9NR16 1453 aa11.76□□□□□ -0.53
SGIP1-202ENST00000320161 PAPPAQ13219 1627 aa11.76□□□□□ -0.53
SGIP1-202ENST00000320161 HMGB2P26583 209 aaKnown RBP11.76□□□□□ -0.53
SGIP1-202ENST00000320161 GPR162Q16538 588 aa11.76□□□□□ -0.53
SGIP1-202ENST00000320161 SLC16A10Q8TF71 515 aa11.76□□□□□ -0.53
SGIP1-202ENST00000320161 KCNA4P22459 653 aa11.75□□□□□ -0.53
SGIP1-202ENST00000320161 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
SGIP1-202ENST00000320161 SMG6Q86US8 1419 aaKnown RBP11.75□□□□□ -0.53
SGIP1-202ENST00000320161 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
SGIP1-202ENST00000320161 LY75O60449 1722 aa11.74□□□□□ -0.53
SGIP1-202ENST00000320161 TUBGCP6Q96RT7 1819 aa11.74□□□□□ -0.53
SGIP1-202ENST00000320161 ZNF784Q8NCA9 323 aaPredicted RBP11.73□□□□□ -0.53
SGIP1-202ENST00000320161 KIF20BQ96Q89 1820 aa11.73□□□□□ -0.53
SGIP1-202ENST00000320161 MAP3K5Q99683 1374 aa11.73□□□□□ -0.53
SGIP1-202ENST00000320161 ANKRD36BQ8N2N9 1353 aa11.72□□□□□ -0.53
SGIP1-202ENST00000320161 ZNF827Q17R98 1081 aa11.72□□□□□ -0.53
SGIP1-202ENST00000320161 ZCRB1Q8TBF4 217 aaKnown RBP11.72□□□□□ -0.53
SGIP1-202ENST00000320161 RAPGEF4Q8WZA2 1011 aa11.72□□□□□ -0.53
SGIP1-202ENST00000320161 RTL1A6NKG5 1358 aa11.71□□□□□ -0.53
SGIP1-202ENST00000320161 USP47Q96K76 1375 aa11.71□□□□□ -0.53
SGIP1-202ENST00000320161 MAP3K19Q56UN5 1328 aa11.71□□□□□ -0.53
SGIP1-202ENST00000320161 HOXC9P31274 260 aa11.71□□□□□ -0.53
SGIP1-202ENST00000320161 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.53
SGIP1-202ENST00000320161 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.53
SGIP1-202ENST00000320161 CGNL1Q0VF96 1302 aa11.7□□□□□ -0.54
SGIP1-202ENST00000320161 SHANK3Q9BYB0 1731 aa11.7□□□□□ -0.54
SGIP1-202ENST00000320161 ST20-MTHFSA0A0A6YYL1 179 aa11.7□□□□□ -0.54
SGIP1-202ENST00000320161 TMF1P82094 1093 aa11.7□□□□□ -0.54
SGIP1-202ENST00000320161 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
SGIP1-202ENST00000320161 LRRC4BQ9NT99 713 aa11.7□□□□□ -0.54
SGIP1-202ENST00000320161 CCNL1Q9UK58 526 aaPredicted RBP11.7□□□□□ -0.54
SGIP1-202ENST00000320161 COL24A1Q17RW2 1714 aa11.69□□□□□ -0.54
SGIP1-202ENST00000320161 TATP17735 454 aaPredicted RBP11.69□□□□□ -0.54
SGIP1-202ENST00000320161 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
SGIP1-202ENST00000320161 C5P01031 1676 aa11.68□□□□□ -0.54
SGIP1-202ENST00000320161 SENP3-EIF4A1A0A087X0R7 540 aa11.68□□□□□ -0.54
SGIP1-202ENST00000320161 TAF1LQ8IZX4 1826 aa11.67□□□□□ -0.54
SGIP1-202ENST00000320161 PNPLA7Q6ZV29 1317 aa11.67□□□□□ -0.54
SGIP1-202ENST00000320161 GIGYF1O75420 1035 aaPredicted RBP11.67□□□□□ -0.54
SGIP1-202ENST00000320161 FLAD1Q8NFF5 587 aa11.67□□□□□ -0.54
SGIP1-202ENST00000320161 ITGB4P16144 1822 aa11.67□□□□□ -0.54
SGIP1-202ENST00000320161 PCDH11XQ9BZA7 1347 aa11.66□□□□□ -0.54
SGIP1-202ENST00000320161 PCDH11YQ9BZA8 1340 aa11.66□□□□□ -0.54
SGIP1-202ENST00000320161 GRIN3BO60391 1043 aa11.66□□□□□ -0.54
SGIP1-202ENST00000320161 KCNQ4P56696 695 aa11.66□□□□□ -0.54
SGIP1-202ENST00000320161 RRS1Q15050 365 aaKnown RBP11.66□□□□□ -0.54
SGIP1-202ENST00000320161 U3KPZ7 1027 aaPredicted RBP11.66□□□□□ -0.54
SGIP1-202ENST00000320161 MEGF6O75095 1541 aa11.65□□□□□ -0.54
SGIP1-202ENST00000320161 DSG3P32926 999 aa11.65□□□□□ -0.54
SGIP1-202ENST00000320161 C1QTNF8P60827 252 aa11.65□□□□□ -0.54
SGIP1-202ENST00000320161 TESK2Q96S53 571 aa11.65□□□□□ -0.54
SGIP1-202ENST00000320161 GGNBP2Q9H3C7 697 aa11.65□□□□□ -0.54
SGIP1-202ENST00000320161 NBPF6Q5VWK0 638 aa11.64□□□□□ -0.55
SGIP1-202ENST00000320161 USHBP1Q8N6Y0 703 aa11.64□□□□□ -0.55
SGIP1-202ENST00000320161 SMARCC1Q92922 1105 aaPredicted RBP11.64□□□□□ -0.55
SGIP1-202ENST00000320161 NBPF4Q96M43 638 aa11.64□□□□□ -0.55
SGIP1-202ENST00000320161 MAP2P11137 1827 aaKnown RBP11.64□□□□□ -0.55
SGIP1-202ENST00000320161 FLT4P35916 1363 aa11.64□□□□□ -0.55
SGIP1-202ENST00000320161 KIF24Q5T7B8 1368 aa11.64□□□□□ -0.55
SGIP1-202ENST00000320161 NSD3Q9BZ95 1437 aa11.63□□□□□ -0.55
SGIP1-202ENST00000320161 FYB1O15117 783 aa11.63□□□□□ -0.55
SGIP1-202ENST00000320161 FBLN1P23142 703 aa11.63□□□□□ -0.55
SGIP1-202ENST00000320161 MPRIPQ6WCQ1 1025 aa11.63□□□□□ -0.55
SGIP1-202ENST00000320161 AK7Q96M32 723 aa11.63□□□□□ -0.55
SGIP1-202ENST00000320161 INSRP06213 1382 aa11.63□□□□□ -0.55
SGIP1-202ENST00000320161 PPM1GO15355 546 aaPredicted RBP11.62□□□□□ -0.55
SGIP1-202ENST00000320161 NSD2O96028 1365 aa11.62□□□□□ -0.55
SGIP1-202ENST00000320161 PALLDQ8WX93 1383 aa11.62□□□□□ -0.55
SGIP1-202ENST00000320161 PKD1L3Q7Z443 1732 aa11.61□□□□□ -0.55
SGIP1-202ENST00000320161 MSL1Q68DK7 614 aa11.61□□□□□ -0.55
SGIP1-202ENST00000320161 COL23A1Q86Y22 540 aaPredicted RBP11.61□□□□□ -0.55
SGIP1-202ENST00000320161 NLGN2Q8NFZ4 835 aa11.61□□□□□ -0.55
SGIP1-202ENST00000320161 SPG7Q9UQ90 795 aa11.61□□□□□ -0.55
SGIP1-202ENST00000320161 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
SGIP1-202ENST00000320161 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
SGIP1-202ENST00000320161 CD2APQ9Y5K6 639 aa11.6□□□□□ -0.55
SGIP1-202ENST00000320161 UBR3Q6ZT12 1888 aa11.59□□□□□ -0.55
SGIP1-202ENST00000320161 TOGARAM1Q9Y4F4 1720 aa11.58□□□□□ -0.56
SGIP1-202ENST00000320161 UTRNP46939 3433 aa11.57□□□□□ -0.56
SGIP1-202ENST00000320161 PHF14O94880 888 aa11.57□□□□□ -0.56
SGIP1-202ENST00000320161 SP7Q8TDD2 431 aaPredicted RBP11.57□□□□□ -0.56
SGIP1-202ENST00000320161 TMOD3Q9NYL9 352 aa11.57□□□□□ -0.56
SGIP1-202ENST00000320161 ANKRD26Q9UPS8 1709 aa11.57□□□□□ -0.56
SGIP1-202ENST00000320161 YBX3P16989 372 aaKnown RBP eCLIP11.56□□□□□ -0.56
SGIP1-202ENST00000320161 POLR3GLQ9BT43 218 aa11.56□□□□□ -0.56
SGIP1-202ENST00000320161 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
SGIP1-202ENST00000320161 CYP27B1O15528 508 aa11.55□□□□□ -0.56
SGIP1-202ENST00000320161 SLC4A2P04920 1241 aa11.55□□□□□ -0.56
SGIP1-202ENST00000320161 EMILIN1Q9Y6C2 1016 aa11.55□□□□□ -0.56
SGIP1-202ENST00000320161 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.54□□□□□ -0.56
SGIP1-202ENST00000320161 SSFA2P28290 1259 aa11.54□□□□□ -0.56
SGIP1-202ENST00000320161 TRIM26Q12899 539 aaPredicted RBP11.54□□□□□ -0.56
SGIP1-202ENST00000320161 IFNL2Q8IZJ0 200 aa11.54□□□□□ -0.56
SGIP1-202ENST00000320161 PIGBQ92521 554 aa11.54□□□□□ -0.56
SGIP1-202ENST00000320161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.56
SGIP1-202ENST00000320161 ATP10DQ9P241 1426 aa11.53□□□□□ -0.56
SGIP1-202ENST00000320161 LOC102724428A0A0B4J2F2 783 aa11.53□□□□□ -0.56
SGIP1-202ENST00000320161 GNPATO15228 680 aa11.53□□□□□ -0.56
SGIP1-202ENST00000320161 ATP6V1AP38606 617 aa11.53□□□□□ -0.56
SGIP1-202ENST00000320161 SIK1P57059 783 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms