RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 MAPK8IP3Q9UPT6 1336 aa18.58■□□□□ 0.57
MSRA-201ENST00000317173 APAF1O14727 1248 aa18.57■□□□□ 0.56
MSRA-201ENST00000317173 CSB-PGBD3P0DP91 1061 aa18.57■□□□□ 0.56
MSRA-201ENST00000317173 SF3B2Q13435 895 aaKnown RBP18.57■□□□□ 0.56
MSRA-201ENST00000317173 PRKAR2BP31323 418 aa18.55■□□□□ 0.56
MSRA-201ENST00000317173 EYA1Q99502 592 aa18.55■□□□□ 0.56
MSRA-201ENST00000317173 CDCA7Q9BWT1 371 aaPredicted RBP18.55■□□□□ 0.56
MSRA-201ENST00000317173 CARD10Q9BWT7 1032 aa18.55■□□□□ 0.56
MSRA-201ENST00000317173 NCAPD2Q15021 1401 aa18.55■□□□□ 0.56
MSRA-201ENST00000317173 RGPD2P0DJD1 1756 aa18.55■□□□□ 0.56
MSRA-201ENST00000317173 PARP4Q9UKK3 1724 aaKnown RBP18.55■□□□□ 0.56
MSRA-201ENST00000317173 ERBB3P21860 1342 aa18.54■□□□□ 0.56
MSRA-201ENST00000317173 HMOX1P09601 288 aa18.54■□□□□ 0.56
MSRA-201ENST00000317173 PDE3BQ13370 1112 aa18.54■□□□□ 0.56
MSRA-201ENST00000317173 SULT6B1Q6IMI4 303 aa18.54■□□□□ 0.56
MSRA-201ENST00000317173 CCDC27Q2M243 656 aa18.54■□□□□ 0.56
MSRA-201ENST00000317173 FAM196AQ6ZSG2 479 aa18.54■□□□□ 0.56
MSRA-201ENST00000317173 ANKRD24Q8TF21 1146 aa18.54■□□□□ 0.56
MSRA-201ENST00000317173 LTV1Q96GA3 475 aaPredicted RBP18.53■□□□□ 0.56
MSRA-201ENST00000317173 ZNF521Q96K83 1311 aa18.51■□□□□ 0.55
MSRA-201ENST00000317173 WNK3Q9BYP7 1800 aa18.51■□□□□ 0.55
MSRA-201ENST00000317173 PLEKHG2Q9H7P9 1386 aa18.51■□□□□ 0.55
MSRA-201ENST00000317173 TMPOP42166 694 aaKnown RBP18.5■□□□□ 0.55
MSRA-201ENST00000317173 FAM182BQ5T319 152 aa18.5■□□□□ 0.55
MSRA-201ENST00000317173 AEBP1Q8IUX7 1158 aa18.5■□□□□ 0.55
MSRA-201ENST00000317173 DLG5Q8TDM6 1919 aa18.5■□□□□ 0.55
MSRA-201ENST00000317173 DDB1Q16531 1140 aa18.49■□□□□ 0.55
MSRA-201ENST00000317173 LRRC37A3O60309 1634 aa18.49■□□□□ 0.55
MSRA-201ENST00000317173 BAG6P46379 1132 aa18.49■□□□□ 0.55
MSRA-201ENST00000317173 NBPF6Q5VWK0 638 aa18.49■□□□□ 0.55
MSRA-201ENST00000317173 NBPF4Q96M43 638 aa18.49■□□□□ 0.55
MSRA-201ENST00000317173 DISP2A7MBM2 1401 aa18.48■□□□□ 0.55
MSRA-201ENST00000317173 NFE2L2Q16236 605 aa18.48■□□□□ 0.55
MSRA-201ENST00000317173 NLRP2Q9NX02 1062 aa18.48■□□□□ 0.55
MSRA-201ENST00000317173 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
MSRA-201ENST00000317173 PHACTR3Q96KR7 559 aa18.47■□□□□ 0.55
MSRA-201ENST00000317173 OVOS2A0A0G2JMS6 1433 aa18.46■□□□□ 0.55
MSRA-201ENST00000317173 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
MSRA-201ENST00000317173 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
MSRA-201ENST00000317173 WWC1Q8IX03 1113 aa18.46■□□□□ 0.55
MSRA-201ENST00000317173 SENP3-EIF4A1A0A087X0R7 540 aa18.45■□□□□ 0.54
MSRA-201ENST00000317173 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
MSRA-201ENST00000317173 WDR63Q8IWG1 891 aa18.45■□□□□ 0.54
MSRA-201ENST00000317173 RIPK4P57078 832 aa18.44■□□□□ 0.54
MSRA-201ENST00000317173 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
MSRA-201ENST00000317173 RRP7AQ9Y3A4 280 aaKnown RBP18.44■□□□□ 0.54
MSRA-201ENST00000317173 TNS1Q9HBL0 1735 aaKnown RBP18.44■□□□□ 0.54
MSRA-201ENST00000317173 TRIM37O94972 964 aa18.44■□□□□ 0.54
MSRA-201ENST00000317173 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
MSRA-201ENST00000317173 TNS2Q63HR2 1409 aa18.43■□□□□ 0.54
MSRA-201ENST00000317173 EXOC5O00471 708 aa18.43■□□□□ 0.54
MSRA-201ENST00000317173 IL2RBP14784 551 aa18.43■□□□□ 0.54
MSRA-201ENST00000317173 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
MSRA-201ENST00000317173 BCL9O00512 1426 aa18.42■□□□□ 0.54
MSRA-201ENST00000317173 E9PSI1 815 aa18.41■□□□□ 0.54
MSRA-201ENST00000317173 CALD1Q05682 793 aaKnown RBP18.41■□□□□ 0.54
MSRA-201ENST00000317173 AMOTQ4VCS5 1084 aa18.41■□□□□ 0.54
MSRA-201ENST00000317173 USHBP1Q8N6Y0 703 aa18.41■□□□□ 0.54
MSRA-201ENST00000317173 IL16Q14005 1332 aa18.41■□□□□ 0.54
MSRA-201ENST00000317173 HTATSF1O43719 755 aaKnown RBP18.39■□□□□ 0.54
MSRA-201ENST00000317173 MARCH10Q8NA82 808 aaPredicted RBP18.39■□□□□ 0.54
MSRA-201ENST00000317173 PKD1L3Q7Z443 1732 aa18.39■□□□□ 0.53
MSRA-201ENST00000317173 APBA3O96018 575 aa18.39■□□□□ 0.53
MSRA-201ENST00000317173 EN1Q05925 392 aaPredicted RBP18.39■□□□□ 0.53
MSRA-201ENST00000317173 SLFN5Q08AF3 891 aa18.39■□□□□ 0.53
MSRA-201ENST00000317173 MTHFSDQ2M296 383 aaKnown RBP18.39■□□□□ 0.53
MSRA-201ENST00000317173 PLEKHO1Q53GL0 409 aaPredicted RBP18.39■□□□□ 0.53
MSRA-201ENST00000317173 RAPGEF4Q8WZA2 1011 aa18.39■□□□□ 0.53
MSRA-201ENST00000317173 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
MSRA-201ENST00000317173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.38■□□□□ 0.53
MSRA-201ENST00000317173 TATP17735 454 aaPredicted RBP18.37■□□□□ 0.53
MSRA-201ENST00000317173 CDCA7LQ96GN5 454 aa18.37■□□□□ 0.53
MSRA-201ENST00000317173 MAP3K5Q99683 1374 aa18.36■□□□□ 0.53
MSRA-201ENST00000317173 MEGF6O75095 1541 aa18.36■□□□□ 0.53
MSRA-201ENST00000317173 DUSP27Q5VZP5 1158 aa18.35■□□□□ 0.53
MSRA-201ENST00000317173 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
MSRA-201ENST00000317173 VIRMAQ69YN4 1812 aaKnown RBP18.35■□□□□ 0.53
MSRA-201ENST00000317173 GNAT3A8MTJ3 354 aa18.34■□□□□ 0.53
MSRA-201ENST00000317173 RTF1Q92541 710 aaKnown RBP18.34■□□□□ 0.53
MSRA-201ENST00000317173 CAMKK2Q96RR4 588 aa18.34■□□□□ 0.53
MSRA-201ENST00000317173 BCL11BQ9C0K0 894 aaPredicted RBP18.34■□□□□ 0.53
MSRA-201ENST00000317173 SBF2Q86WG5 1849 aa18.34■□□□□ 0.53
MSRA-201ENST00000317173 EZH2Q15910 746 aaKnown RBP18.33■□□□□ 0.52
MSRA-201ENST00000317173 AKAP4Q5JQC9 854 aa18.33■□□□□ 0.52
MSRA-201ENST00000317173 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
MSRA-201ENST00000317173 ADAMTS7Q9UKP4 1686 aa18.32■□□□□ 0.52
MSRA-201ENST00000317173 RGPD3A6NKT7 1758 aaPredicted RBP18.31■□□□□ 0.52
MSRA-201ENST00000317173 RGPD4Q7Z3J3 1758 aa18.31■□□□□ 0.52
MSRA-201ENST00000317173 ZNF530Q6P9A1 599 aaPredicted RBP18.31■□□□□ 0.52
MSRA-201ENST00000317173 SPINK5Q9NQ38 1064 aaPredicted RBP18.31■□□□□ 0.52
MSRA-201ENST00000317173 IFT57Q9NWB7 429 aa18.31■□□□□ 0.52
MSRA-201ENST00000317173 GNAI1P63096 354 aa18.3■□□□□ 0.52
MSRA-201ENST00000317173 C1orf141Q5JVX7 400 aa18.3■□□□□ 0.52
MSRA-201ENST00000317173 PLSCR1O15162 318 aa18.29■□□□□ 0.52
MSRA-201ENST00000317173 RREB1Q92766 1687 aa18.29■□□□□ 0.52
MSRA-201ENST00000317173 SCN11AQ9UI33 1791 aa18.29■□□□□ 0.52
MSRA-201ENST00000317173 SHANK3Q9BYB0 1731 aa18.29■□□□□ 0.52
MSRA-201ENST00000317173 ZCRB1Q8TBF4 217 aaKnown RBP18.28■□□□□ 0.52
MSRA-201ENST00000317173 CFAP44Q96MT7 982 aa18.28■□□□□ 0.52
MSRA-201ENST00000317173 NHSQ6T4R5 1651 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms