RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 CAMTA1Q9Y6Y1 1673 aa20.33■□□□□ 0.85
CALR-201ENST00000316448 LMO7Q8WWI1 1683 aa20.33■□□□□ 0.84
CALR-201ENST00000316448 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.33■□□□□ 0.84
CALR-201ENST00000316448 TNNQ9UQP3 1299 aa20.33■□□□□ 0.84
CALR-201ENST00000316448 GNAT3A8MTJ3 354 aa20.32■□□□□ 0.84
CALR-201ENST00000316448 CT47B1P0C2W7 299 aaPredicted RBP20.32■□□□□ 0.84
CALR-201ENST00000316448 C8orf58Q8NAV2 365 aa20.32■□□□□ 0.84
CALR-201ENST00000316448 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
CALR-201ENST00000316448 SSH1Q8WYL5 1049 aa20.31■□□□□ 0.84
CALR-201ENST00000316448 NLRP2Q9NX02 1062 aa20.31■□□□□ 0.84
CALR-201ENST00000316448 ABCA3Q99758 1704 aa20.31■□□□□ 0.84
CALR-201ENST00000316448 HTATSF1O43719 755 aaKnown RBP20.31■□□□□ 0.84
CALR-201ENST00000316448 VAMP4O75379 141 aa20.31■□□□□ 0.84
CALR-201ENST00000316448 RTF1Q92541 710 aaKnown RBP20.31■□□□□ 0.84
CALR-201ENST00000316448 PRDM11Q9NQV5 511 aa20.31■□□□□ 0.84
CALR-201ENST00000316448 ELL2O00472 640 aaPredicted RBP20.3■□□□□ 0.84
CALR-201ENST00000316448 AHDC1Q5TGY3 1603 aaPredicted RBP20.3■□□□□ 0.84
CALR-201ENST00000316448 MAP3K5Q99683 1374 aa20.3■□□□□ 0.84
CALR-201ENST00000316448 KRT24Q2M2I5 525 aa20.29■□□□□ 0.84
CALR-201ENST00000316448 HAP1P54257 671 aaPredicted RBP20.29■□□□□ 0.84
CALR-201ENST00000316448 FRAT1Q92837 279 aaPredicted RBP20.29■□□□□ 0.84
CALR-201ENST00000316448 ABCC6O95255 1503 aa20.28■□□□□ 0.84
CALR-201ENST00000316448 FAM208AQ9UK61 1670 aaKnown RBP20.28■□□□□ 0.84
CALR-201ENST00000316448 CSB-PGBD3P0DP91 1061 aa20.28■□□□□ 0.84
CALR-201ENST00000316448 LGR6Q9HBX8 967 aa20.28■□□□□ 0.84
CALR-201ENST00000316448 PLEKHO1Q53GL0 409 aaPredicted RBP20.27■□□□□ 0.84
CALR-201ENST00000316448 ZNF530Q6P9A1 599 aaPredicted RBP20.27■□□□□ 0.84
CALR-201ENST00000316448 PANK1Q8TE04 598 aa20.27■□□□□ 0.84
CALR-201ENST00000316448 PIP4K2BP78356 416 aa20.26■□□□□ 0.83
CALR-201ENST00000316448 SMC4Q9NTJ3 1288 aa20.25■□□□□ 0.83
CALR-201ENST00000316448 RLBP1P12271 317 aa20.25■□□□□ 0.83
CALR-201ENST00000316448 TWISTNBQ3B726 338 aaPredicted RBP20.25■□□□□ 0.83
CALR-201ENST00000316448 AMOTQ4VCS5 1084 aa20.25■□□□□ 0.83
CALR-201ENST00000316448 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
CALR-201ENST00000316448 LRRC37A3O60309 1634 aa20.25■□□□□ 0.83
CALR-201ENST00000316448 TCERG1O14776 1098 aaKnown RBP20.24■□□□□ 0.83
CALR-201ENST00000316448 CEMIPQ8WUJ3 1361 aa20.24■□□□□ 0.83
CALR-201ENST00000316448 TOM1O60784 492 aa20.23■□□□□ 0.83
CALR-201ENST00000316448 PDE3AQ14432 1141 aa20.23■□□□□ 0.83
CALR-201ENST00000316448 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
CALR-201ENST00000316448 MEGF6O75095 1541 aa20.23■□□□□ 0.83
CALR-201ENST00000316448 COL5A2P05997 1499 aaPredicted RBP20.23■□□□□ 0.83
CALR-201ENST00000316448 MPRIPQ6WCQ1 1025 aa20.23■□□□□ 0.83
CALR-201ENST00000316448 WDR17Q8IZU2 1322 aa20.22■□□□□ 0.83
CALR-201ENST00000316448 ALDH1L2Q3SY69 923 aa20.22■□□□□ 0.83
CALR-201ENST00000316448 TSPYL4Q9UJ04 414 aa20.22■□□□□ 0.83
CALR-201ENST00000316448 NOB1Q9ULX3 412 aaKnown RBP20.22■□□□□ 0.83
CALR-201ENST00000316448 CANXP27824 592 aaKnown RBP20.21■□□□□ 0.83
CALR-201ENST00000316448 MRPL50Q8N5N7 158 aaKnown RBP20.21■□□□□ 0.83
CALR-201ENST00000316448 RAPGEF4Q8WZA2 1011 aa20.21■□□□□ 0.83
CALR-201ENST00000316448 TAF7Q15545 349 aaPredicted RBP20.21■□□□□ 0.83
CALR-201ENST00000316448 CLUAP1Q96AJ1 413 aa20.21■□□□□ 0.83
CALR-201ENST00000316448 COG6Q9Y2V7 657 aa20.21■□□□□ 0.83
CALR-201ENST00000316448 COL16A1Q07092 1604 aaPredicted RBP20.21■□□□□ 0.83
CALR-201ENST00000316448 UBAP1LF5GYI3 381 aa20.2■□□□□ 0.82
CALR-201ENST00000316448 TATP17735 454 aaPredicted RBP20.2■□□□□ 0.82
CALR-201ENST00000316448 LARP1Q6PKG0 1096 aaKnown RBP20.2■□□□□ 0.82
CALR-201ENST00000316448 RNMTO43148 476 aaKnown RBP20.19■□□□□ 0.82
CALR-201ENST00000316448 ZNF428Q96B54 188 aa20.19■□□□□ 0.82
CALR-201ENST00000316448 STRN4Q9NRL3 753 aa20.19■□□□□ 0.82
CALR-201ENST00000316448 COL22A1Q8NFW1 1626 aaPredicted RBP20.19■□□□□ 0.82
CALR-201ENST00000316448 PHLPP1O60346 1717 aa20.19■□□□□ 0.82
CALR-201ENST00000316448 BRPF1P55201 1214 aaPredicted RBP20.19■□□□□ 0.82
CALR-201ENST00000316448 ZKSCAN2Q63HK3 967 aa20.19■□□□□ 0.82
CALR-201ENST00000316448 TOM1L2Q6ZVM7 507 aa20.19■□□□□ 0.82
CALR-201ENST00000316448 TRIM27P14373 513 aa20.18■□□□□ 0.82
CALR-201ENST00000316448 C1orf141Q5JVX7 400 aa20.17■□□□□ 0.82
CALR-201ENST00000316448 BTG4Q9NY30 223 aa20.17■□□□□ 0.82
CALR-201ENST00000316448 KCNQ3O43525 872 aa20.16■□□□□ 0.82
CALR-201ENST00000316448 CARD10Q9BWT7 1032 aa20.16■□□□□ 0.82
CALR-201ENST00000316448 PHKG2P15735 406 aa20.15■□□□□ 0.82
CALR-201ENST00000316448 EVA1CP58658 441 aa20.15■□□□□ 0.82
CALR-201ENST00000316448 ATF7IPQ6VMQ6 1270 aa20.15■□□□□ 0.82
CALR-201ENST00000316448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.15■□□□□ 0.823e-35■□□□□ 9
CALR-201ENST00000316448 CYP27B1O15528 508 aa20.15■□□□□ 0.82
CALR-201ENST00000316448 BABAM1Q9NWV8 329 aa20.15■□□□□ 0.82
CALR-201ENST00000316448 KDM2BQ8NHM5 1336 aa20.15■□□□□ 0.82
CALR-201ENST00000316448 DZIP1LQ8IYY4 767 aaKnown RBP20.14■□□□□ 0.81
CALR-201ENST00000316448 SPG7Q9UQ90 795 aa20.14■□□□□ 0.81
CALR-201ENST00000316448 RBM19Q9Y4C8 960 aaKnown RBP20.14■□□□□ 0.81
CALR-201ENST00000316448 KDM6AO15550 1401 aaPredicted RBP20.13■□□□□ 0.81
CALR-201ENST00000316448 KIF16BQ96L93 1317 aa20.12■□□□□ 0.81
CALR-201ENST00000316448 OVOS2A0A0G2JMS6 1433 aa20.12■□□□□ 0.81
CALR-201ENST00000316448 ADAMTS7Q9UKP4 1686 aa20.12■□□□□ 0.81
CALR-201ENST00000316448 ADAMTS2O95450 1211 aa20.12■□□□□ 0.81
CALR-201ENST00000316448 TEFQ10587 303 aa20.12■□□□□ 0.81
CALR-201ENST00000316448 IFNL2Q8IZJ0 200 aa20.11■□□□□ 0.81
CALR-201ENST00000316448 CERKQ8TCT0 537 aa20.11■□□□□ 0.81
CALR-201ENST00000316448 VIRMAQ69YN4 1812 aaKnown RBP20.11■□□□□ 0.81
CALR-201ENST00000316448 EIF4A1P60842 406 aaKnown RBP20.1■□□□□ 0.81
CALR-201ENST00000316448 MVPQ14764 893 aaKnown RBP20.1■□□□□ 0.81
CALR-201ENST00000316448 TMEM57Q8N5G2 664 aa20.1■□□□□ 0.81
CALR-201ENST00000316448 PKD1L3Q7Z443 1732 aa20.1■□□□□ 0.81
CALR-201ENST00000316448 COL14A1Q05707 1796 aaKnown RBP20.1■□□□□ 0.81
CALR-201ENST00000316448 NUTM2BA6NNL0 878 aaPredicted RBP20.1■□□□□ 0.81
CALR-201ENST00000316448 BTBD11A6QL63 1104 aa20.1■□□□□ 0.81
CALR-201ENST00000316448 NUTM2EB1AL46 878 aaPredicted RBP20.1■□□□□ 0.81
CALR-201ENST00000316448 IPO8O15397 1037 aaKnown RBP20.1■□□□□ 0.81
CALR-201ENST00000316448 NUTM2AQ8IVF1 878 aaPredicted RBP20.1■□□□□ 0.81
CALR-201ENST00000316448 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms