RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 ZC3H6P61129 1189 aaKnown RBP13.09□□□□□ -0.31
HNF4A-201ENST00000316099 PLEKHO1Q53GL0 409 aaPredicted RBP13.09□□□□□ -0.31
HNF4A-201ENST00000316099 REC8O95072 547 aa13.09□□□□□ -0.31
HNF4A-201ENST00000316099 AEBP1Q8IUX7 1158 aa13.09□□□□□ -0.31
HNF4A-201ENST00000316099 ATP7BP35670 1465 aa13.09□□□□□ -0.31
HNF4A-201ENST00000316099 SIGLEC1Q9BZZ2 1709 aa13.09□□□□□ -0.31
HNF4A-201ENST00000316099 FKBP5Q13451 457 aaPredicted RBP13.09□□□□□ -0.31
HNF4A-201ENST00000316099 ADGRB1O14514 1584 aa13.08□□□□□ -0.32
HNF4A-201ENST00000316099 KRT28Q7Z3Y7 464 aa13.08□□□□□ -0.32
HNF4A-201ENST00000316099 MYO5BQ9ULV0 1848 aa13.08□□□□□ -0.32
HNF4A-201ENST00000316099 TEX35Q5T0J7 233 aa13.08□□□□□ -0.32
HNF4A-201ENST00000316099 CCDC39Q9UFE4 941 aa13.08□□□□□ -0.32
HNF4A-201ENST00000316099 PTPRMP28827 1452 aa13.08□□□□□ -0.32
HNF4A-201ENST00000316099 FAM135BQ49AJ0 1406 aa13.08□□□□□ -0.32
HNF4A-201ENST00000316099 GNAT3A8MTJ3 354 aa13.07□□□□□ -0.32
HNF4A-201ENST00000316099 PHACTR3Q96KR7 559 aa13.07□□□□□ -0.32
HNF4A-201ENST00000316099 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
HNF4A-201ENST00000316099 IL16Q14005 1332 aa13.07□□□□□ -0.32
HNF4A-201ENST00000316099 SKAP1Q86WV1 359 aa13.07□□□□□ -0.32
HNF4A-201ENST00000316099 SPATA31D1Q6ZQQ2 1576 aa13.06□□□□□ -0.32
HNF4A-201ENST00000316099 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
HNF4A-201ENST00000316099 IL13P35225 146 aa13.06□□□□□ -0.32
HNF4A-201ENST00000316099 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
HNF4A-201ENST00000316099 TMEM57Q8N5G2 664 aa13.06□□□□□ -0.32
HNF4A-201ENST00000316099 A0A0U1RQG5 324 aaPredicted RBP13.06□□□□□ -0.32
HNF4A-201ENST00000316099 BECN2A8MW95 431 aa13.06□□□□□ -0.32
HNF4A-201ENST00000316099 HSPA2P54652 639 aa13.06□□□□□ -0.32
HNF4A-201ENST00000316099 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
HNF4A-201ENST00000316099 MBIPQ9NS73 344 aa13.06□□□□□ -0.32
HNF4A-201ENST00000316099 PLEKHG3A1L390 1219 aa13.05□□□□□ -0.32
HNF4A-201ENST00000316099 CCDC30Q5VVM6 783 aa13.05□□□□□ -0.32
HNF4A-201ENST00000316099 H3BQV1 296 aa13.05□□□□□ -0.32
HNF4A-201ENST00000316099 IFFO2Q5TF58 517 aa13.05□□□□□ -0.32
HNF4A-201ENST00000316099 PRR36Q9H6K5 1346 aa13.05□□□□□ -0.32
HNF4A-201ENST00000316099 SF3A1Q15459 793 aaKnown RBP13.05□□□□□ -0.32
HNF4A-201ENST00000316099 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
HNF4A-201ENST00000316099 SYTL4Q96C24 671 aaPredicted RBP13.05□□□□□ -0.32
HNF4A-201ENST00000316099 MEX3CQ5U5Q3 659 aaKnown RBP13.04□□□□□ -0.32
HNF4A-201ENST00000316099 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
HNF4A-201ENST00000316099 PDZRN3Q9UPQ7 1066 aa13.04□□□□□ -0.32
HNF4A-201ENST00000316099 NASPP49321 788 aaPredicted RBP13.04□□□□□ -0.32
HNF4A-201ENST00000316099 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
HNF4A-201ENST00000316099 RNF123Q5XPI4 1314 aa13.04□□□□□ -0.32
HNF4A-201ENST00000316099 ARHGEF28Q8N1W1 1705 aaKnown RBP13.04□□□□□ -0.32
HNF4A-201ENST00000316099 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
HNF4A-201ENST00000316099 IFT172Q9UG01 1749 aa13.04□□□□□ -0.32
HNF4A-201ENST00000316099 MAP3K19Q56UN5 1328 aa13.03□□□□□ -0.32
HNF4A-201ENST00000316099 DIAPH3Q9NSV4 1193 aa13.03□□□□□ -0.32
HNF4A-201ENST00000316099 FLT4P35916 1363 aa13.03□□□□□ -0.32
HNF4A-201ENST00000316099 TRIM27P14373 513 aa13.03□□□□□ -0.32
HNF4A-201ENST00000316099 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
HNF4A-201ENST00000316099 TRIM35Q9UPQ4 493 aa13.03□□□□□ -0.32
HNF4A-201ENST00000316099 TATP17735 454 aaPredicted RBP13.02□□□□□ -0.32
HNF4A-201ENST00000316099 RILPL2Q969X0 211 aa13.02□□□□□ -0.32
HNF4A-201ENST00000316099 PKNOX2Q96KN3 472 aa13.02□□□□□ -0.32
HNF4A-201ENST00000316099 CCDC173Q0VFZ6 552 aa13.02□□□□□ -0.33
HNF4A-201ENST00000316099 INTS3Q68E01 1043 aaKnown RBP13.02□□□□□ -0.33
HNF4A-201ENST00000316099 REREQ9P2R6 1566 aa13.02□□□□□ -0.33
HNF4A-201ENST00000316099 TRAK2O60296 914 aa13.01□□□□□ -0.33
HNF4A-201ENST00000316099 MCTP1Q6DN14 999 aa13.01□□□□□ -0.33
HNF4A-201ENST00000316099 FAM184AQ8NB25 1140 aa13.01□□□□□ -0.33
HNF4A-201ENST00000316099 ZNF592Q92610 1267 aa13.01□□□□□ -0.33
HNF4A-201ENST00000316099 TNNQ9UQP3 1299 aa13.01□□□□□ -0.33
HNF4A-201ENST00000316099 R3HCC1Q9Y3T6 440 aaKnown RBP13.01□□□□□ -0.33
HNF4A-201ENST00000316099 MSH5O43196 834 aa13.01□□□□□ -0.33
HNF4A-201ENST00000316099 STRN4Q9NRL3 753 aa13.01□□□□□ -0.33
HNF4A-201ENST00000316099 CCDC70Q6NSX1 233 aa13.01□□□□□ -0.33
HNF4A-201ENST00000316099 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
HNF4A-201ENST00000316099 MYO3AQ8NEV4 1616 aa13.01□□□□□ -0.33
HNF4A-201ENST00000316099 IL27Q8NEV9 243 aa13.01□□□□□ -0.33
HNF4A-201ENST00000316099 TAF7LQ5H9L4 462 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 RUFY2Q8WXA3 655 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 ORAI2Q96SN7 254 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 DLC1Q96QB1 1528 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 BTBD11A6QL63 1104 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 TPM1P09493 284 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 HOXC9P31274 260 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 GORABQ5T7V8 394 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 KIF13AQ9H1H9 1805 aa13□□□□□ -0.33
HNF4A-201ENST00000316099 ARGLU1Q9NWB6 273 aaPredicted RBP13□□□□□ -0.33
HNF4A-201ENST00000316099 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
HNF4A-201ENST00000316099 EYA1Q99502 592 aa12.99□□□□□ -0.33
HNF4A-201ENST00000316099 MTHFSDQ2M296 383 aaKnown RBP12.99□□□□□ -0.33
HNF4A-201ENST00000316099 MSH6P52701 1360 aa12.99□□□□□ -0.33
HNF4A-201ENST00000316099 ZNF521Q96K83 1311 aa12.99□□□□□ -0.33
HNF4A-201ENST00000316099 TOM1L2Q6ZVM7 507 aa12.99□□□□□ -0.33
HNF4A-201ENST00000316099 FER1L4A9Z1Z3 1794 aa12.99□□□□□ -0.33
HNF4A-201ENST00000316099 AIMP1Q12904 312 aaKnown RBP12.99□□□□□ -0.33
HNF4A-201ENST00000316099 NPHP4O75161 1426 aaPredicted RBP12.98□□□□□ -0.33
HNF4A-201ENST00000316099 ANKRD24Q8TF21 1146 aa12.98□□□□□ -0.33
HNF4A-201ENST00000316099 PRDM11Q9NQV5 511 aa12.98□□□□□ -0.33
HNF4A-201ENST00000316099 SBNO1A3KN83 1393 aa12.98□□□□□ -0.33
HNF4A-201ENST00000316099 USP6P35125 1406 aa12.98□□□□□ -0.33
HNF4A-201ENST00000316099 LETM1O95202 739 aaPredicted RBP12.98□□□□□ -0.33
HNF4A-201ENST00000316099 IGHDP01880 384 aa12.98□□□□□ -0.33
HNF4A-201ENST00000316099 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
HNF4A-201ENST00000316099 TSR1Q2NL82 804 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms