RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 NFE2L2Q16236 605 aa10.89□□□□□ -0.67
CTC1-201ENST00000315684 TDO2P48775 406 aa10.89□□□□□ -0.67
CTC1-201ENST00000315684 CCDC24Q8N4L8 307 aa10.89□□□□□ -0.67
CTC1-201ENST00000315684 ZNF408Q9H9D4 720 aa10.89□□□□□ -0.67
CTC1-201ENST00000315684 CAVIN4Q5BKX8 364 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 SETDB2Q96T68 719 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 PARP3Q9Y6F1 533 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 DDX46Q7L014 1031 aaKnown RBP10.88□□□□□ -0.67
CTC1-201ENST00000315684 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.88□□□□□ -0.676e-6■■■□□ 19.2
CTC1-201ENST00000315684 GJA3Q9Y6H8 435 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 CTTNBP2Q8WZ74 1663 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 TMPOP42166 694 aaKnown RBP10.88□□□□□ -0.67
CTC1-201ENST00000315684 DZIP1Q86YF9 867 aaKnown RBP10.88□□□□□ -0.67
CTC1-201ENST00000315684 RIMBP2O15034 1052 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 POLR3DP05423 398 aaPredicted RBP10.88□□□□□ -0.67
CTC1-201ENST00000315684 RTN4Q9NQC3 1192 aaKnown RBP10.88□□□□□ -0.67
CTC1-201ENST00000315684 PPIP5K1Q6PFW1 1433 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 TPM4P67936 248 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 STK3Q13188 491 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 GBP4Q96PP9 640 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 C14orf93Q9H972 538 aaKnown RBP10.88□□□□□ -0.67
CTC1-201ENST00000315684 SLAIN2Q9P270 581 aa10.88□□□□□ -0.67
CTC1-201ENST00000315684 WDR62O43379 1518 aa10.87□□□□□ -0.67
CTC1-201ENST00000315684 CEP89Q96ST8 783 aa10.87□□□□□ -0.67
CTC1-201ENST00000315684 STK32BQ9NY57 414 aa10.87□□□□□ -0.67
CTC1-201ENST00000315684 IQSEC3Q9UPP2 1182 aaPredicted RBP10.87□□□□□ -0.67
CTC1-201ENST00000315684 NUP153P49790 1475 aaKnown RBP10.87□□□□□ -0.67
CTC1-201ENST00000315684 KIAA0556O60303 1618 aa10.87□□□□□ -0.67
CTC1-201ENST00000315684 MINDY4BA8MYZ0 360 aa10.87□□□□□ -0.67
CTC1-201ENST00000315684 GNPATO15228 680 aa10.87□□□□□ -0.67
CTC1-201ENST00000315684 IL2RBP14784 551 aa10.87□□□□□ -0.67
CTC1-201ENST00000315684 ZNF526Q8TF50 670 aaPredicted RBP10.87□□□□□ -0.67
CTC1-201ENST00000315684 CENPQQ7L2Z9 268 aaPredicted RBP10.87□□□□□ -0.67
CTC1-201ENST00000315684 NUTM1Q86Y26 1132 aa10.87□□□□□ -0.67
CTC1-201ENST00000315684 ABCC2Q92887 1545 aa10.86□□□□□ -0.67
CTC1-201ENST00000315684 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
CTC1-201ENST00000315684 FCHSD2O94868 740 aa10.86□□□□□ -0.67
CTC1-201ENST00000315684 SIRT1Q96EB6 747 aa10.86□□□□□ -0.67
CTC1-201ENST00000315684 R3HCC1Q9Y3T6 440 aaKnown RBP10.86□□□□□ -0.67
CTC1-201ENST00000315684 NCOA1Q15788 1441 aa10.86□□□□□ -0.67
CTC1-201ENST00000315684 IFIT5Q13325 482 aaKnown RBP10.86□□□□□ -0.67
CTC1-201ENST00000315684 SART3Q15020 963 aaKnown RBP10.86□□□□□ -0.67
CTC1-201ENST00000315684 GPR162Q16538 588 aa10.86□□□□□ -0.67
CTC1-201ENST00000315684 DNAJC5Q9H3Z4 198 aa10.86□□□□□ -0.67
CTC1-201ENST00000315684 JAG2Q9Y219 1238 aa10.86□□□□□ -0.67
CTC1-201ENST00000315684 RTCBQ9Y3I0 505 aaKnown RBP10.86□□□□□ -0.67
CTC1-201ENST00000315684 TRMT1LQ7Z2T5 733 aaKnown RBP10.86□□□□□ -0.67
CTC1-201ENST00000315684 QTRT2Q9H974 415 aaKnown RBP10.86□□□□□ -0.67
CTC1-201ENST00000315684 NINLQ9Y2I6 1382 aa10.86□□□□□ -0.67
CTC1-201ENST00000315684 A0A087WZG4 1122 aa10.85□□□□□ -0.67
CTC1-201ENST00000315684 WDHD1O75717 1129 aaPredicted RBP10.85□□□□□ -0.67
CTC1-201ENST00000315684 REC8O95072 547 aa10.85□□□□□ -0.67
CTC1-201ENST00000315684 SAFBQ15424 915 aaKnown RBP eCLIP10.85□□□□□ -0.67
CTC1-201ENST00000315684 NIP7Q9Y221 180 aaKnown RBP eCLIP10.85□□□□□ -0.67
CTC1-201ENST00000315684 MAP3K2Q9Y2U5 619 aa10.85□□□□□ -0.67
CTC1-201ENST00000315684 CCT4P50991 539 aaKnown RBP10.84□□□□□ -0.67
CTC1-201ENST00000315684 NFATC2IPQ8NCF5 419 aa10.84□□□□□ -0.67
CTC1-201ENST00000315684 ZBED9Q6R2W3 1325 aa10.84□□□□□ -0.67
CTC1-201ENST00000315684 TTC21BQ7Z4L5 1316 aa10.84□□□□□ -0.67
CTC1-201ENST00000315684 CEP170Q5SW79 1584 aa10.84□□□□□ -0.67
CTC1-201ENST00000315684 INTS3Q68E01 1043 aaKnown RBP10.84□□□□□ -0.67
CTC1-201ENST00000315684 GCP02774 474 aa10.84□□□□□ -0.67
CTC1-201ENST00000315684 ERC1Q8IUD2 1116 aa10.84□□□□□ -0.67
CTC1-201ENST00000315684 ZHX3Q9H4I2 956 aa10.83□□□□□ -0.68
CTC1-201ENST00000315684 CCNL1Q9UK58 526 aaPredicted RBP10.83□□□□□ -0.68
CTC1-201ENST00000315684 EXOC6BQ9Y2D4 811 aa10.83□□□□□ -0.68
CTC1-201ENST00000315684 CCDC184Q52MB2 194 aa10.83□□□□□ -0.68
CTC1-201ENST00000315684 NACAP1Q9BZK3 213 aa10.83□□□□□ -0.68
CTC1-201ENST00000315684 ANKRD18BA2A2Z9 1011 aa10.83□□□□□ -0.68
CTC1-201ENST00000315684 LARP1Q6PKG0 1096 aaKnown RBP10.83□□□□□ -0.68
CTC1-201ENST00000315684 IFIT1P09914 478 aaKnown RBP10.83□□□□□ -0.68
CTC1-201ENST00000315684 CEBPZQ03701 1054 aaKnown RBP10.83□□□□□ -0.68
CTC1-201ENST00000315684 AEBP1Q8IUX7 1158 aa10.83□□□□□ -0.68
CTC1-201ENST00000315684 BRMS1Q9HCU9 246 aa10.83□□□□□ -0.68
CTC1-201ENST00000315684 WWC2Q6AWC2 1192 aa10.82□□□□□ -0.68
CTC1-201ENST00000315684 LRRCC1Q9C099 1032 aa10.82□□□□□ -0.68
CTC1-201ENST00000315684 SMARCA5O60264 1052 aaPredicted RBP10.82□□□□□ -0.68
CTC1-201ENST00000315684 PPP1R42Q7Z4L9 355 aa10.82□□□□□ -0.68
CTC1-201ENST00000315684 VEZTQ9HBM0 779 aa10.82□□□□□ -0.68
CTC1-201ENST00000315684 CCDC8Q9H0W5 538 aaPredicted RBP10.82□□□□□ -0.68
CTC1-201ENST00000315684 ATP10AO60312 1499 aa10.82□□□□□ -0.68
CTC1-201ENST00000315684 HMGB2P26583 209 aaKnown RBP10.82□□□□□ -0.68
CTC1-201ENST00000315684 CSPP1Q1MSJ5 1256 aa10.82□□□□□ -0.68
CTC1-201ENST00000315684 CCDC69A6NI79 296 aa10.82□□□□□ -0.68
CTC1-201ENST00000315684 CWC27Q6UX04 472 aaKnown RBP10.82□□□□□ -0.68
CTC1-201ENST00000315684 BICD2Q8TD16 824 aa10.82□□□□□ -0.68
CTC1-201ENST00000315684 AIDAQ96BJ3 306 aa10.82□□□□□ -0.68
CTC1-201ENST00000315684 MKNK2Q9HBH9 465 aa10.81□□□□□ -0.68
CTC1-201ENST00000315684 SMC3Q9UQE7 1217 aa10.81□□□□□ -0.68
CTC1-201ENST00000315684 BOLA2Q9H3K6 86 aa10.81□□□□□ -0.68
CTC1-201ENST00000315684 FEZ1Q99689 392 aa10.81□□□□□ -0.68
CTC1-201ENST00000315684 SNRKQ9NRH2 765 aa10.81□□□□□ -0.68
CTC1-201ENST00000315684 BAG6P46379 1132 aa10.81□□□□□ -0.68
CTC1-201ENST00000315684 BRD4O60885 1362 aaPredicted RBP10.81□□□□□ -0.68
CTC1-201ENST00000315684 ABCC10Q5T3U5 1492 aa10.81□□□□□ -0.68
CTC1-201ENST00000315684 ZNF76P36508 570 aa10.81□□□□□ -0.68
CTC1-201ENST00000315684 UBE3BQ7Z3V4 1068 aa10.81□□□□□ -0.68
CTC1-201ENST00000315684 DUOX2Q9NRD8 1548 aa10.81□□□□□ -0.68
CTC1-201ENST00000315684 TRAPPC3LQ5T215 181 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 HSP90AB3PQ58FF7 597 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms