RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ME1P48163 572 aa16.36■□□□□ 0.21
SPAST-201ENST00000315285 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
SPAST-201ENST00000315285 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.36■□□□□ 0.21
SPAST-201ENST00000315285 JMYQ8N9B5 988 aa16.36■□□□□ 0.21
SPAST-201ENST00000315285 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
SPAST-201ENST00000315285 WASLO00401 505 aaPredicted RBP16.35■□□□□ 0.21
SPAST-201ENST00000315285 RRP12Q5JTH9 1297 aaKnown RBP16.35■□□□□ 0.21
SPAST-201ENST00000315285 RAPGEF6Q8TEU7 1601 aa16.35■□□□□ 0.21
SPAST-201ENST00000315285 F6X3S4 739 aa16.35■□□□□ 0.21
SPAST-201ENST00000315285 GLRX3O76003 335 aaKnown RBP16.35■□□□□ 0.21
SPAST-201ENST00000315285 CASTP20810 708 aaKnown RBP16.35■□□□□ 0.21
SPAST-201ENST00000315285 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
SPAST-201ENST00000315285 SPATA32Q96LK8 384 aa16.35■□□□□ 0.21
SPAST-201ENST00000315285 RAB11FIP3O75154 756 aa16.35■□□□□ 0.21
SPAST-201ENST00000315285 KRT32Q14532 448 aa16.35■□□□□ 0.21
SPAST-201ENST00000315285 STRN4Q9NRL3 753 aa16.35■□□□□ 0.21
SPAST-201ENST00000315285 PRAG1Q86YV5 1406 aa16.35■□□□□ 0.21
SPAST-201ENST00000315285 SYCE3A1L190 88 aa16.34■□□□□ 0.21
SPAST-201ENST00000315285 TBC1D32Q96NH3 1257 aa16.34■□□□□ 0.21
SPAST-201ENST00000315285 DHX29Q7Z478 1369 aaKnown RBP16.34■□□□□ 0.21
SPAST-201ENST00000315285 ANO8Q9HCE9 1232 aaPredicted RBP16.34■□□□□ 0.21
SPAST-201ENST00000315285 IL16Q14005 1332 aa16.34■□□□□ 0.21
SPAST-201ENST00000315285 ANKLE2Q86XL3 938 aa16.34■□□□□ 0.21
SPAST-201ENST00000315285 NUP153P49790 1475 aaKnown RBP16.34■□□□□ 0.21
SPAST-201ENST00000315285 FANCAO15360 1455 aa16.34■□□□□ 0.21
SPAST-201ENST00000315285 FBXO31Q5XUX0 539 aaPredicted RBP16.33■□□□□ 0.21
SPAST-201ENST00000315285 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.21
SPAST-201ENST00000315285 RBM10P98175 930 aaKnown RBP16.33■□□□□ 0.2
SPAST-201ENST00000315285 CCDC57Q2TAC2 916 aa16.33■□□□□ 0.2
SPAST-201ENST00000315285 TNPO1Q92973 898 aaKnown RBP16.33■□□□□ 0.2
SPAST-201ENST00000315285 NUP62CLQ9H1M0 184 aa16.33■□□□□ 0.2
SPAST-201ENST00000315285 ASXL1Q8IXJ9 1541 aa16.33■□□□□ 0.2
SPAST-201ENST00000315285 PDIA4P13667 645 aaKnown RBP16.33■□□□□ 0.2
SPAST-201ENST00000315285 TOM1L2Q6ZVM7 507 aa16.33■□□□□ 0.2
SPAST-201ENST00000315285 TCOF1Q13428 1488 aaKnown RBP16.33■□□□□ 0.2
SPAST-201ENST00000315285 NUP160Q12769 1436 aa16.32■□□□□ 0.2
SPAST-201ENST00000315285 SSFA2P28290 1259 aa16.32■□□□□ 0.2
SPAST-201ENST00000315285 FKBP4Q02790 459 aaKnown RBP eCLIP16.32■□□□□ 0.2
SPAST-201ENST00000315285 ANKRD36BQ8N2N9 1353 aa16.32■□□□□ 0.2
SPAST-201ENST00000315285 TBC1D9Q6ZT07 1266 aa16.32■□□□□ 0.2
SPAST-201ENST00000315285 DDX54Q8TDD1 881 aaKnown RBP16.32■□□□□ 0.2
SPAST-201ENST00000315285 CEP126Q9P2H0 1117 aa16.32■□□□□ 0.2
SPAST-201ENST00000315285 CFAP45Q9UL16 551 aa16.32■□□□□ 0.2
SPAST-201ENST00000315285 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
SPAST-201ENST00000315285 MTMR7Q9Y216 660 aa16.32■□□□□ 0.2
SPAST-201ENST00000315285 ZSCAN30Q86W11 494 aa16.32■□□□□ 0.2
SPAST-201ENST00000315285 PTPRCP08575 1304 aa16.31■□□□□ 0.2
SPAST-201ENST00000315285 XPCQ01831 940 aaPredicted RBP16.31■□□□□ 0.2
SPAST-201ENST00000315285 ATP10BO94823 1461 aa16.31■□□□□ 0.2
SPAST-201ENST00000315285 MBIPQ9NS73 344 aa16.31■□□□□ 0.2
SPAST-201ENST00000315285 CCP110O43303 1012 aa16.31■□□□□ 0.2
SPAST-201ENST00000315285 TCEAL9Q9UHQ7 104 aa16.31■□□□□ 0.2
SPAST-201ENST00000315285 PCDHB15Q9Y5E8 787 aa16.31■□□□□ 0.2
SPAST-201ENST00000315285 TRIM22Q8IYM9 498 aa16.3■□□□□ 0.2
SPAST-201ENST00000315285 LRRFIP2Q9Y608 721 aaKnown RBP16.3■□□□□ 0.2
SPAST-201ENST00000315285 PRPF40BQ6NWY9 871 aaKnown RBP16.3■□□□□ 0.2
SPAST-201ENST00000315285 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
SPAST-201ENST00000315285 ITSN2Q9NZM3 1697 aa16.3■□□□□ 0.2
SPAST-201ENST00000315285 HDAC1Q13547 482 aaPredicted RBP16.3■□□□□ 0.2
SPAST-201ENST00000315285 CCDC83Q8IWF9 413 aa16.3■□□□□ 0.2
SPAST-201ENST00000315285 ACBD3Q9H3P7 528 aa16.3■□□□□ 0.2
SPAST-201ENST00000315285 NAP1L1P55209 391 aaKnown RBP16.3■□□□□ 0.2
SPAST-201ENST00000315285 FILIP1LQ4L180 1135 aa16.3■□□□□ 0.2
SPAST-201ENST00000315285 NACAP1Q9BZK3 213 aa16.3■□□□□ 0.2
SPAST-201ENST00000315285 KDM5BQ9UGL1 1544 aa16.29■□□□□ 0.2
SPAST-201ENST00000315285 HSP90B2PQ58FF3 399 aa16.29■□□□□ 0.2
SPAST-201ENST00000315285 SERPINC1P01008 464 aa16.29■□□□□ 0.2
SPAST-201ENST00000315285 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
SPAST-201ENST00000315285 FERMT3Q86UX7 667 aa16.29■□□□□ 0.2
SPAST-201ENST00000315285 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
SPAST-201ENST00000315285 POGZQ7Z3K3 1410 aa16.29■□□□□ 0.2
SPAST-201ENST00000315285 ZC3H6P61129 1189 aaKnown RBP16.29■□□□□ 0.2
SPAST-201ENST00000315285 TESK2Q96S53 571 aa16.29■□□□□ 0.2
SPAST-201ENST00000315285 FLIIQ13045 1269 aa16.28■□□□□ 0.2
SPAST-201ENST00000315285 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
SPAST-201ENST00000315285 DHX8Q14562 1220 aaKnown RBP16.28■□□□□ 0.2
SPAST-201ENST00000315285 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
SPAST-201ENST00000315285 PRDM11Q9NQV5 511 aa16.28■□□□□ 0.2
SPAST-201ENST00000315285 FAM83GA6ND36 823 aa16.28■□□□□ 0.2
SPAST-201ENST00000315285 TXLNAP40222 546 aa16.28■□□□□ 0.2
SPAST-201ENST00000315285 MAP3K11Q16584 847 aa16.28■□□□□ 0.2
SPAST-201ENST00000315285 TTLL5Q6EMB2 1281 aa16.28■□□□□ 0.2
SPAST-201ENST00000315285 GNL3LQ9NVN8 582 aaKnown RBP16.28■□□□□ 0.2
SPAST-201ENST00000315285 CEP57L1Q8IYX8 460 aa16.27■□□□□ 0.2
SPAST-201ENST00000315285 CTTNBP2Q8WZ74 1663 aa16.27■□□□□ 0.2
SPAST-201ENST00000315285 LARP1Q6PKG0 1096 aaKnown RBP16.27■□□□□ 0.2
SPAST-201ENST00000315285 DNAAF4Q8WXU2 420 aa16.27■□□□□ 0.2
SPAST-201ENST00000315285 DDX11Q96FC9 970 aa16.27■□□□□ 0.2
SPAST-201ENST00000315285 DUOX2Q9NRD8 1548 aa16.27■□□□□ 0.2
SPAST-201ENST00000315285 UQCRHLA0A096LP55 91 aa16.27■□□□□ 0.19
SPAST-201ENST00000315285 UQCRHP07919 91 aa16.27■□□□□ 0.19
SPAST-201ENST00000315285 CCDC112Q8NEF3 446 aa16.27■□□□□ 0.19
SPAST-201ENST00000315285 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.19
SPAST-201ENST00000315285 SMARCE1Q969G3 411 aa16.26■□□□□ 0.19
SPAST-201ENST00000315285 RUFY1Q96T51 708 aa16.26■□□□□ 0.19
SPAST-201ENST00000315285 BOLA2Q9H3K6 86 aa16.26■□□□□ 0.19
SPAST-201ENST00000315285 CCDC69A6NI79 296 aa16.26■□□□□ 0.19
SPAST-201ENST00000315285 BRPF1P55201 1214 aaPredicted RBP16.26■□□□□ 0.19
SPAST-201ENST00000315285 NUCB1Q02818 461 aa16.26■□□□□ 0.19
SPAST-201ENST00000315285 ARHGAP45Q92619 1136 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms