RNA–Protein interactions for RNA: ENST00000315091.7

TARDBP-202, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-202ENST00000315091 C8orf58Q8NAV2 365 aa16.16■□□□□ 0.18
TARDBP-202ENST00000315091 LRRC59Q96AG4 307 aaKnown RBP16.16■□□□□ 0.18
TARDBP-202ENST00000315091 KDM2BQ8NHM5 1336 aa16.15■□□□□ 0.18
TARDBP-202ENST00000315091 ZC3H6P61129 1189 aaKnown RBP16.15■□□□□ 0.18
TARDBP-202ENST00000315091 ANKRD24Q8TF21 1146 aa16.15■□□□□ 0.18
TARDBP-202ENST00000315091 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
TARDBP-202ENST00000315091 SOS2Q07890 1332 aaPredicted RBP16.15■□□□□ 0.18
TARDBP-202ENST00000315091 TRIM27P14373 513 aa16.15■□□□□ 0.18
TARDBP-202ENST00000315091 TWISTNBQ3B726 338 aaPredicted RBP16.15■□□□□ 0.18
TARDBP-202ENST00000315091 NOB1Q9ULX3 412 aaKnown RBP16.15■□□□□ 0.18
TARDBP-202ENST00000315091 KIF16BQ96L93 1317 aa16.14■□□□□ 0.17
TARDBP-202ENST00000315091 GNAT3A8MTJ3 354 aa16.14■□□□□ 0.17
TARDBP-202ENST00000315091 CLUAP1Q96AJ1 413 aa16.14■□□□□ 0.17
TARDBP-202ENST00000315091 MAP3K5Q99683 1374 aa16.14■□□□□ 0.17
TARDBP-202ENST00000315091 ATF7IPQ6VMQ6 1270 aa16.13■□□□□ 0.17
TARDBP-202ENST00000315091 DZIP1LQ8IYY4 767 aaKnown RBP16.13■□□□□ 0.17
TARDBP-202ENST00000315091 CABLES1Q8TDN4 633 aa16.13■□□□□ 0.17
TARDBP-202ENST00000315091 CAMTA1Q9Y6Y1 1673 aa16.13■□□□□ 0.17
TARDBP-202ENST00000315091 ERBB3P21860 1342 aa16.13■□□□□ 0.17
TARDBP-202ENST00000315091 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
TARDBP-202ENST00000315091 MS4A1P11836 297 aa16.12■□□□□ 0.17
TARDBP-202ENST00000315091 AAMPQ13685 434 aa16.12■□□□□ 0.17
TARDBP-202ENST00000315091 MRPL50Q8N5N7 158 aaKnown RBP16.12■□□□□ 0.17
TARDBP-202ENST00000315091 KIAA0232Q92628 1395 aa16.12■□□□□ 0.17
TARDBP-202ENST00000315091 CRYBG1Q9Y4K1 1723 aa16.12■□□□□ 0.17
TARDBP-202ENST00000315091 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
TARDBP-202ENST00000315091 RGPD2P0DJD1 1756 aa16.12■□□□□ 0.17
TARDBP-202ENST00000315091 MVPQ14764 893 aaKnown RBP16.12■□□□□ 0.17
TARDBP-202ENST00000315091 IL17REQ8NFR9 667 aa16.12■□□□□ 0.17
TARDBP-202ENST00000315091 CPDO75976 1380 aa16.11■□□□□ 0.17
TARDBP-202ENST00000315091 COL18A1P39060 1754 aa16.11■□□□□ 0.17
TARDBP-202ENST00000315091 IPO8O15397 1037 aaKnown RBP16.1■□□□□ 0.17
TARDBP-202ENST00000315091 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
TARDBP-202ENST00000315091 CENPQQ7L2Z9 268 aaPredicted RBP16.1■□□□□ 0.17
TARDBP-202ENST00000315091 FTSJ3Q8IY81 847 aaKnown RBP16.1■□□□□ 0.17
TARDBP-202ENST00000315091 ABCC6O95255 1503 aa16.1■□□□□ 0.17
TARDBP-202ENST00000315091 LMO7Q8WWI1 1683 aa16.1■□□□□ 0.17
TARDBP-202ENST00000315091 CEMIPQ8WUJ3 1361 aa16.09■□□□□ 0.17
TARDBP-202ENST00000315091 ARHGAP45Q92619 1136 aa16.09■□□□□ 0.17
TARDBP-202ENST00000315091 MIS18AQ9NYP9 233 aa16.09■□□□□ 0.17
TARDBP-202ENST00000315091 TSPYL4Q9UJ04 414 aa16.08■□□□□ 0.17
TARDBP-202ENST00000315091 RGPD5Q99666 1765 aa16.08■□□□□ 0.16
TARDBP-202ENST00000315091 AMOTQ4VCS5 1084 aa16.08■□□□□ 0.16
TARDBP-202ENST00000315091 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
TARDBP-202ENST00000315091 HAP1P54257 671 aaPredicted RBP16.07■□□□□ 0.16
TARDBP-202ENST00000315091 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
TARDBP-202ENST00000315091 IGHDP01880 384 aa16.06■□□□□ 0.16
TARDBP-202ENST00000315091 CHRNA2Q15822 529 aa16.06■□□□□ 0.16
TARDBP-202ENST00000315091 TCERG1O14776 1098 aaKnown RBP16.05■□□□□ 0.16
TARDBP-202ENST00000315091 TAF7Q15545 349 aaPredicted RBP16.05■□□□□ 0.16
TARDBP-202ENST00000315091 AKAP4Q5JQC9 854 aa16.05■□□□□ 0.16
TARDBP-202ENST00000315091 TMEM57Q8N5G2 664 aa16.05■□□□□ 0.16
TARDBP-202ENST00000315091 PCDHB15Q9Y5E8 787 aa16.05■□□□□ 0.16
TARDBP-202ENST00000315091 ZNF530Q6P9A1 599 aaPredicted RBP16.05■□□□□ 0.16
TARDBP-202ENST00000315091 NHSL1Q5SYE7 1610 aa16.04■□□□□ 0.16
TARDBP-202ENST00000315091 ITPRIPQ8IWB1 547 aa16.04■□□□□ 0.16
TARDBP-202ENST00000315091 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
TARDBP-202ENST00000315091 DDX19BQ9UMR2 479 aa16.04■□□□□ 0.16
TARDBP-202ENST00000315091 RBM19Q9Y4C8 960 aaKnown RBP16.04■□□□□ 0.16
TARDBP-202ENST00000315091 NLRP2Q9NX02 1062 aa16.03■□□□□ 0.16
TARDBP-202ENST00000315091 FAM208AQ9UK61 1670 aaKnown RBP16.03■□□□□ 0.16
TARDBP-202ENST00000315091 LTBP4Q8N2S1 1624 aa16.03■□□□□ 0.16
TARDBP-202ENST00000315091 ABCC4O15439 1325 aa16.03■□□□□ 0.16
TARDBP-202ENST00000315091 SKAP1Q86WV1 359 aa16.02■□□□□ 0.16
TARDBP-202ENST00000315091 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
TARDBP-202ENST00000315091 PLEKHG2Q9H7P9 1386 aa16.01■□□□□ 0.15
TARDBP-202ENST00000315091 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
TARDBP-202ENST00000315091 API5Q9BZZ5 524 aaKnown RBP16.01■□□□□ 0.15
TARDBP-202ENST00000315091 PRDM11Q9NQV5 511 aa16.01■□□□□ 0.15
TARDBP-202ENST00000315091 OVOS2A0A0G2JMS6 1433 aa16■□□□□ 0.15
TARDBP-202ENST00000315091 SOS1Q07889 1333 aaPredicted RBP16■□□□□ 0.15
TARDBP-202ENST00000315091 RNMTO43148 476 aaKnown RBP16■□□□□ 0.15
TARDBP-202ENST00000315091 CSB-PGBD3P0DP91 1061 aa16■□□□□ 0.15
TARDBP-202ENST00000315091 MPRIPQ6WCQ1 1025 aa16■□□□□ 0.15
TARDBP-202ENST00000315091 RAPGEF4Q8WZA2 1011 aa16■□□□□ 0.15
TARDBP-202ENST00000315091 RGS12O14924 1447 aa16■□□□□ 0.15
TARDBP-202ENST00000315091 MEGF6O75095 1541 aa15.99■□□□□ 0.15
TARDBP-202ENST00000315091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.99■□□□□ 0.153e-7■■□□□ 13.6
TARDBP-202ENST00000315091 ABCA3Q99758 1704 aa15.99■□□□□ 0.15
TARDBP-202ENST00000315091 ZBTB7BO15156 539 aaPredicted RBP15.98■□□□□ 0.15
TARDBP-202ENST00000315091 TATP17735 454 aaPredicted RBP15.98■□□□□ 0.15
TARDBP-202ENST00000315091 PTPRCP08575 1304 aa15.97■□□□□ 0.15
TARDBP-202ENST00000315091 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
TARDBP-202ENST00000315091 ADAMTS7Q9UKP4 1686 aa15.97■□□□□ 0.15
TARDBP-202ENST00000315091 WDR17Q8IZU2 1322 aa15.97■□□□□ 0.15
TARDBP-202ENST00000315091 EIF4A1P60842 406 aaKnown RBP15.96■□□□□ 0.15
TARDBP-202ENST00000315091 TEFQ10587 303 aa15.96■□□□□ 0.15
TARDBP-202ENST00000315091 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.15
TARDBP-202ENST00000315091 COL5A2P05997 1499 aaPredicted RBP15.96■□□□□ 0.15
TARDBP-202ENST00000315091 HDAC1Q13547 482 aaPredicted RBP15.96■□□□□ 0.14
TARDBP-202ENST00000315091 INTS3Q68E01 1043 aaKnown RBP15.96■□□□□ 0.14
TARDBP-202ENST00000315091 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
TARDBP-202ENST00000315091 ROBO1Q9Y6N7 1651 aa15.95■□□□□ 0.14
TARDBP-202ENST00000315091 AHDC1Q5TGY3 1603 aaPredicted RBP15.95■□□□□ 0.14
TARDBP-202ENST00000315091 KDM3BQ7LBC6 1761 aa15.94■□□□□ 0.14
TARDBP-202ENST00000315091 BTBD11A6QL63 1104 aa15.94■□□□□ 0.14
TARDBP-202ENST00000315091 KCNQ3O43525 872 aa15.94■□□□□ 0.14
TARDBP-202ENST00000315091 PHKG2P15735 406 aa15.94■□□□□ 0.14
TARDBP-202ENST00000315091 CCDC30Q5VVM6 783 aa15.94■□□□□ 0.14
TARDBP-202ENST00000315091 HOXB7P09629 217 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms