RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 SYCE3A1L190 88 aa14.93□□□□□ -0.02
LAMA3-202ENST00000313654 GBP7Q8N8V2 638 aaPredicted RBP14.93□□□□□ -0.02
LAMA3-202ENST00000313654 SSBP05455 408 aaKnown RBP eCLIP14.93□□□□□ -0.02
LAMA3-202ENST00000313654 VPS36Q86VN1 386 aa14.92□□□□□ -0.02
LAMA3-202ENST00000313654 KRT85P78386 507 aa14.92□□□□□ -0.02
LAMA3-202ENST00000313654 STK3Q13188 491 aa14.92□□□□□ -0.02
LAMA3-202ENST00000313654 XPCQ01831 940 aaPredicted RBP14.92□□□□□ -0.02
LAMA3-202ENST00000313654 SEPT14Q6ZU15 432 aa14.92□□□□□ -0.02
LAMA3-202ENST00000313654 MCM2P49736 904 aa14.92□□□□□ -0.02
LAMA3-202ENST00000313654 TTC16Q8NEE8 873 aa14.92□□□□□ -0.02
LAMA3-202ENST00000313654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.92□□□□□ -0.02
LAMA3-202ENST00000313654 SMTNL1A8MU46 457 aa14.92□□□□□ -0.02
LAMA3-202ENST00000313654 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
LAMA3-202ENST00000313654 CFAP65Q6ZU64 1925 aaKnown RBP14.92□□□□□ -0.02
LAMA3-202ENST00000313654 CCDC121Q6ZUS5 278 aa14.91□□□□□ -0.02
LAMA3-202ENST00000313654 NUP62CLQ9H1M0 184 aa14.91□□□□□ -0.02
LAMA3-202ENST00000313654 SPATA32Q96LK8 384 aa14.91□□□□□ -0.02
LAMA3-202ENST00000313654 ALS2CR12Q96Q35 445 aa14.91□□□□□ -0.02
LAMA3-202ENST00000313654 KIF5BP33176 963 aa14.91□□□□□ -0.02
LAMA3-202ENST00000313654 WDR33Q9C0J8 1336 aaKnown RBP14.91□□□□□ -0.02
LAMA3-202ENST00000313654 USO1O60763 962 aaKnown RBP14.91□□□□□ -0.02
LAMA3-202ENST00000313654 WHAMMQ8TF30 809 aa14.91□□□□□ -0.02
LAMA3-202ENST00000313654 CTNNA2P26232 953 aa14.91□□□□□ -0.02
LAMA3-202ENST00000313654 KIF4BQ2VIQ3 1234 aa14.91□□□□□ -0.02
LAMA3-202ENST00000313654 ERCC3P19447 782 aa14.91□□□□□ -0.02
LAMA3-202ENST00000313654 PPP1R12BO60237 982 aaPredicted RBP14.9□□□□□ -0.02
LAMA3-202ENST00000313654 ATP2B2Q01814 1243 aa14.9□□□□□ -0.02
LAMA3-202ENST00000313654 KIF4AO95239 1232 aa14.9□□□□□ -0.02
LAMA3-202ENST00000313654 NBPF1Q3BBV0 1214 aa14.9□□□□□ -0.02
LAMA3-202ENST00000313654 PABPN1LA6NDY0 278 aaKnown RBP14.9□□□□□ -0.02
LAMA3-202ENST00000313654 SMC6Q96SB8 1091 aa14.9□□□□□ -0.02
LAMA3-202ENST00000313654 HSF2BPO75031 334 aa14.9□□□□□ -0.02
LAMA3-202ENST00000313654 CCDC96Q2M329 555 aa14.9□□□□□ -0.02
LAMA3-202ENST00000313654 TRIM22Q8IYM9 498 aa14.9□□□□□ -0.02
LAMA3-202ENST00000313654 DDX58O95786 925 aaKnown RBP14.9□□□□□ -0.02
LAMA3-202ENST00000313654 MRPS9P82933 396 aaKnown RBP14.9□□□□□ -0.02
LAMA3-202ENST00000313654 MICALL1Q8N3F8 863 aa14.9□□□□□ -0.02
LAMA3-202ENST00000313654 URI1O94763 535 aaPredicted RBP14.9□□□□□ -0.02
LAMA3-202ENST00000313654 FKBP5Q13451 457 aaPredicted RBP14.9□□□□□ -0.02
LAMA3-202ENST00000313654 KRT222Q8N1A0 295 aa14.9□□□□□ -0.02
LAMA3-202ENST00000313654 CAMK4Q16566 473 aa14.9□□□□□ -0.02
LAMA3-202ENST00000313654 NGDNQ8NEJ9 315 aaKnown RBP14.9□□□□□ -0.02
LAMA3-202ENST00000313654 GOLGA6L9A6NEM1 432 aa14.89□□□□□ -0.03
LAMA3-202ENST00000313654 TACC1O75410 805 aa14.89□□□□□ -0.03
LAMA3-202ENST00000313654 MKRN1Q9UHC7 482 aaKnown RBP14.89□□□□□ -0.03
LAMA3-202ENST00000313654 SEPT10Q9P0V9 454 aa14.89□□□□□ -0.03
LAMA3-202ENST00000313654 RABGAP1Q9Y3P9 1069 aa14.89□□□□□ -0.03
LAMA3-202ENST00000313654 NUP88Q99567 741 aaPredicted RBP14.88□□□□□ -0.03
LAMA3-202ENST00000313654 ARL1P40616 181 aaPredicted RBP14.88□□□□□ -0.03
LAMA3-202ENST00000313654 TEFQ10587 303 aa14.88□□□□□ -0.03
LAMA3-202ENST00000313654 NAA15Q9BXJ9 866 aaKnown RBP14.88□□□□□ -0.03
LAMA3-202ENST00000313654 MAP3K11Q16584 847 aa14.88□□□□□ -0.03
LAMA3-202ENST00000313654 ZMAT2Q96NC0 199 aaKnown RBP14.88□□□□□ -0.03
LAMA3-202ENST00000313654 PDIA4P13667 645 aaKnown RBP14.87□□□□□ -0.03
LAMA3-202ENST00000313654 CLIP2Q9UDT6 1046 aa14.87□□□□□ -0.03
LAMA3-202ENST00000313654 DYNC1I1O14576 645 aa14.87□□□□□ -0.03
LAMA3-202ENST00000313654 MAP7D1Q3KQU3 841 aa14.87□□□□□ -0.03
LAMA3-202ENST00000313654 TBC1D2BQ9UPU7 963 aa14.87□□□□□ -0.03
LAMA3-202ENST00000313654 PKD2Q13563 968 aa14.87□□□□□ -0.03
LAMA3-202ENST00000313654 RBM28Q9NW13 759 aaKnown RBP14.87□□□□□ -0.03
LAMA3-202ENST00000313654 ZBTB16Q05516 673 aa14.86□□□□□ -0.03
LAMA3-202ENST00000313654 ZNF853P0CG23 659 aa14.86□□□□□ -0.03
LAMA3-202ENST00000313654 MRVI1Q9Y6F6 885 aa14.86□□□□□ -0.03
LAMA3-202ENST00000313654 DNAI2Q9GZS0 605 aa14.86□□□□□ -0.03
LAMA3-202ENST00000313654 BMP2KQ9NSY1 1161 aaPredicted RBP14.86□□□□□ -0.03
LAMA3-202ENST00000313654 IQCGQ9H095 443 aaKnown RBP14.86□□□□□ -0.03
LAMA3-202ENST00000313654 CEP164Q9UPV0 1460 aa14.86□□□□□ -0.03
LAMA3-202ENST00000313654 PAFAH1B1P43034 410 aa14.86□□□□□ -0.03
LAMA3-202ENST00000313654 CLNS1AP54105 237 aaKnown RBP14.85□□□□□ -0.03
LAMA3-202ENST00000313654 EPSTI1Q96J88 318 aa14.85□□□□□ -0.03
LAMA3-202ENST00000313654 HIP1O00291 1037 aa14.85□□□□□ -0.03
LAMA3-202ENST00000313654 SSX2IPQ9Y2D8 614 aa14.85□□□□□ -0.03
LAMA3-202ENST00000313654 KIF5AQ12840 1032 aa14.85□□□□□ -0.03
LAMA3-202ENST00000313654 CCDC83Q8IWF9 413 aa14.85□□□□□ -0.03
LAMA3-202ENST00000313654 API5Q9BZZ5 524 aaKnown RBP14.85□□□□□ -0.03
LAMA3-202ENST00000313654 PANK1Q8TE04 598 aa14.85□□□□□ -0.03
LAMA3-202ENST00000313654 TRMT1Q9NXH9 659 aaKnown RBP14.85□□□□□ -0.03
LAMA3-202ENST00000313654 GOLIM4O00461 696 aa14.85□□□□□ -0.03
LAMA3-202ENST00000313654 DRC1Q96MC2 740 aa14.85□□□□□ -0.03
LAMA3-202ENST00000313654 PRPF4BQ13523 1007 aaKnown RBP14.85□□□□□ -0.03
LAMA3-202ENST00000313654 CCDC170Q8IYT3 715 aa14.85□□□□□ -0.03
LAMA3-202ENST00000313654 FKBP15Q5T1M5 1219 aa14.85□□□□□ -0.03
LAMA3-202ENST00000313654 CCDC69A6NI79 296 aa14.84□□□□□ -0.03
LAMA3-202ENST00000313654 ANKRD1Q15327 319 aa14.84□□□□□ -0.03
LAMA3-202ENST00000313654 SYTL4Q96C24 671 aaPredicted RBP14.84□□□□□ -0.03
LAMA3-202ENST00000313654 CYP46A1Q9Y6A2 500 aa14.84□□□□□ -0.03
LAMA3-202ENST00000313654 TOP1P11387 765 aaKnown RBP14.84□□□□□ -0.03
LAMA3-202ENST00000313654 PRR16Q569H4 304 aa14.84□□□□□ -0.03
LAMA3-202ENST00000313654 DNAJC21Q5F1R6 531 aaKnown RBP14.84□□□□□ -0.03
LAMA3-202ENST00000313654 NOL7Q9UMY1 257 aaKnown RBP14.84□□□□□ -0.03
LAMA3-202ENST00000313654 STMN1P16949 149 aa14.84□□□□□ -0.03
LAMA3-202ENST00000313654 CEP128Q6ZU80 1094 aa14.84□□□□□ -0.03
LAMA3-202ENST00000313654 STIM2Q9P246 746 aa14.84□□□□□ -0.03
LAMA3-202ENST00000313654 CASQ2O14958 399 aaPredicted RBP14.84□□□□□ -0.03
LAMA3-202ENST00000313654 LARP1BQ659C4 914 aaKnown RBP14.83□□□□□ -0.03
LAMA3-202ENST00000313654 CACNA2D4Q7Z3S7 1137 aa14.83□□□□□ -0.03
LAMA3-202ENST00000313654 KLHL10Q6JEL2 608 aa14.83□□□□□ -0.04
LAMA3-202ENST00000313654 CCDC155Q8N6L0 562 aa14.83□□□□□ -0.04
LAMA3-202ENST00000313654 DDX27Q96GQ7 796 aaKnown RBP14.83□□□□□ -0.04
LAMA3-202ENST00000313654 A0A1B0GUA9 196 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms