RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
MSL3-201ENST00000312196 EIF4G2P78344 907 aaKnown RBP eCLIP11.69□□□□□ -0.54
MSL3-201ENST00000312196 CARD14Q9BXL6 1004 aa11.69□□□□□ -0.54
MSL3-201ENST00000312196 SYT17Q9BSW7 474 aa11.69□□□□□ -0.54
MSL3-201ENST00000312196 WASHC2AQ641Q2 1341 aa11.68□□□□□ -0.54
MSL3-201ENST00000312196 ARXQ96QS3 562 aa11.68□□□□□ -0.54
MSL3-201ENST00000312196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.542e-8■■■■■ 35.5
MSL3-201ENST00000312196 RGPD2P0DJD1 1756 aa11.68□□□□□ -0.54
MSL3-201ENST00000312196 PTF1AQ7RTS3 328 aa11.68□□□□□ -0.54
MSL3-201ENST00000312196 FLAD1Q8NFF5 587 aa11.67□□□□□ -0.54
MSL3-201ENST00000312196 ZCRB1Q8TBF4 217 aaKnown RBP11.67□□□□□ -0.54
MSL3-201ENST00000312196 MEGF6O75095 1541 aa11.66□□□□□ -0.54
MSL3-201ENST00000312196 DOT1LQ8TEK3 1739 aa11.66□□□□□ -0.54
MSL3-201ENST00000312196 SOX12O15370 315 aa11.66□□□□□ -0.54
MSL3-201ENST00000312196 NKX1-1Q15270 411 aaPredicted RBP11.65□□□□□ -0.54
MSL3-201ENST00000312196 CHD4Q14839 1912 aa11.65□□□□□ -0.54
MSL3-201ENST00000312196 ZNF831Q5JPB2 1677 aa11.65□□□□□ -0.54
MSL3-201ENST00000312196 ZBTB7AO95365 584 aa11.65□□□□□ -0.54
MSL3-201ENST00000312196 POLD1P28340 1107 aa11.65□□□□□ -0.54
MSL3-201ENST00000312196 FHDC1Q9C0D6 1143 aaPredicted RBP11.65□□□□□ -0.54
MSL3-201ENST00000312196 GGNBP2Q9H3C7 697 aa11.65□□□□□ -0.54
MSL3-201ENST00000312196 TATP17735 454 aaPredicted RBP11.64□□□□□ -0.55
MSL3-201ENST00000312196 MAP2P11137 1827 aaKnown RBP11.64□□□□□ -0.55
MSL3-201ENST00000312196 HSPA5P11021 654 aaKnown RBP11.64□□□□□ -0.55
MSL3-201ENST00000312196 NBPF6Q5VWK0 638 aa11.64□□□□□ -0.55
MSL3-201ENST00000312196 NBPF4Q96M43 638 aa11.64□□□□□ -0.55
MSL3-201ENST00000312196 PCDH11XQ9BZA7 1347 aa11.64□□□□□ -0.55
MSL3-201ENST00000312196 PCDH11YQ9BZA8 1340 aa11.64□□□□□ -0.55
MSL3-201ENST00000312196 ATF5Q9Y2D1 282 aaPredicted RBP11.63□□□□□ -0.55
MSL3-201ENST00000312196 ZNF827Q17R98 1081 aa11.63□□□□□ -0.55
MSL3-201ENST00000312196 RAPGEF4Q8WZA2 1011 aa11.63□□□□□ -0.55
MSL3-201ENST00000312196 LRRC4BQ9NT99 713 aa11.63□□□□□ -0.55
MSL3-201ENST00000312196 NPC1L1Q9UHC9 1359 aa11.62□□□□□ -0.55
MSL3-201ENST00000312196 GRIN3BO60391 1043 aa11.62□□□□□ -0.55
MSL3-201ENST00000312196 PNPLA7Q6ZV29 1317 aa11.62□□□□□ -0.55
MSL3-201ENST00000312196 ZNF784Q8NCA9 323 aaPredicted RBP11.61□□□□□ -0.55
MSL3-201ENST00000312196 SMARCC1Q92922 1105 aaPredicted RBP11.61□□□□□ -0.55
MSL3-201ENST00000312196 PCGF6Q9BYE7 350 aa11.61□□□□□ -0.55
MSL3-201ENST00000312196 PDGFDQ9GZP0 370 aaPredicted RBP11.61□□□□□ -0.55
MSL3-201ENST00000312196 RRS1Q15050 365 aaKnown RBP11.6□□□□□ -0.55
MSL3-201ENST00000312196 CCER1Q8TC90 406 aaPredicted RBP11.6□□□□□ -0.55
MSL3-201ENST00000312196 ACSBG1Q96GR2 724 aa11.6□□□□□ -0.55
MSL3-201ENST00000312196 POLKQ9UBT6 870 aa11.6□□□□□ -0.55
MSL3-201ENST00000312196 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
MSL3-201ENST00000312196 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
MSL3-201ENST00000312196 CD2APQ9Y5K6 639 aa11.6□□□□□ -0.55
MSL3-201ENST00000312196 CICQ96RK0 1608 aaPredicted RBP11.6□□□□□ -0.55
MSL3-201ENST00000312196 TOGARAM1Q9Y4F4 1720 aa11.59□□□□□ -0.55
MSL3-201ENST00000312196 LTV1Q96GA3 475 aaPredicted RBP11.59□□□□□ -0.55
MSL3-201ENST00000312196 ITGB4P16144 1822 aa11.59□□□□□ -0.55
MSL3-201ENST00000312196 IGSF1Q8N6C5 1336 aa11.58□□□□□ -0.56
MSL3-201ENST00000312196 PRIM1P49642 420 aaKnown RBP11.58□□□□□ -0.56
MSL3-201ENST00000312196 TUBGCP6Q96RT7 1819 aa11.58□□□□□ -0.56
MSL3-201ENST00000312196 C5P01031 1676 aa11.58□□□□□ -0.56
MSL3-201ENST00000312196 TAF1LQ8IZX4 1826 aa11.57□□□□□ -0.56
MSL3-201ENST00000312196 PANK3Q9H999 370 aa11.57□□□□□ -0.56
MSL3-201ENST00000312196 C1QTNF8P60827 252 aa11.57□□□□□ -0.56
MSL3-201ENST00000312196 DDX54Q8TDD1 881 aaKnown RBP11.57□□□□□ -0.56
MSL3-201ENST00000312196 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
MSL3-201ENST00000312196 HSP90AB1P08238 724 aaKnown RBP11.56□□□□□ -0.56
MSL3-201ENST00000312196 TFCP2L1Q9NZI6 479 aa11.56□□□□□ -0.56
MSL3-201ENST00000312196 CCNL1Q9UK58 526 aaPredicted RBP11.56□□□□□ -0.56
MSL3-201ENST00000312196 EYA1Q99502 592 aa11.55□□□□□ -0.56
MSL3-201ENST00000312196 CYP27B1O15528 508 aa11.55□□□□□ -0.56
MSL3-201ENST00000312196 FBLN1P23142 703 aa11.55□□□□□ -0.56
MSL3-201ENST00000312196 AMOTQ4VCS5 1084 aa11.55□□□□□ -0.56
MSL3-201ENST00000312196 KDRP35968 1356 aa11.55□□□□□ -0.56
MSL3-201ENST00000312196 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
MSL3-201ENST00000312196 GPR162Q16538 588 aa11.54□□□□□ -0.56
MSL3-201ENST00000312196 IFNL2Q8IZJ0 200 aa11.54□□□□□ -0.56
MSL3-201ENST00000312196 ERVV-2B6SEH9 535 aa11.53□□□□□ -0.56
MSL3-201ENST00000312196 AMER1Q5JTC6 1135 aaPredicted RBP11.53□□□□□ -0.56
MSL3-201ENST00000312196 ADAMTS7Q9UKP4 1686 aa11.53□□□□□ -0.56
MSL3-201ENST00000312196 C4BP0C0L5 1744 aa11.53□□□□□ -0.56
MSL3-201ENST00000312196 SSFA2P28290 1259 aa11.53□□□□□ -0.56
MSL3-201ENST00000312196 COL23A1Q86Y22 540 aaPredicted RBP11.53□□□□□ -0.56
MSL3-201ENST00000312196 KNSTRNQ9Y448 316 aa11.53□□□□□ -0.56
MSL3-201ENST00000312196 PALLDQ8WX93 1383 aa11.52□□□□□ -0.56
MSL3-201ENST00000312196 PHKG2P15735 406 aa11.52□□□□□ -0.57
MSL3-201ENST00000312196 KIF7Q2M1P5 1343 aa11.52□□□□□ -0.57
MSL3-201ENST00000312196 ADCY9O60503 1353 aa11.52□□□□□ -0.57
MSL3-201ENST00000312196 PLEKHO1Q53GL0 409 aaPredicted RBP11.52□□□□□ -0.57
MSL3-201ENST00000312196 MORC1Q86VD1 984 aa11.52□□□□□ -0.57
MSL3-201ENST00000312196 PER1O15534 1290 aaPredicted RBP11.51□□□□□ -0.57
MSL3-201ENST00000312196 USHBP1Q8N6Y0 703 aa11.51□□□□□ -0.57
MSL3-201ENST00000312196 UBR3Q6ZT12 1888 aa11.5□□□□□ -0.57
MSL3-201ENST00000312196 RC3H1Q5TC82 1133 aaKnown RBP11.5□□□□□ -0.57
MSL3-201ENST00000312196 DCAF5Q96JK2 942 aa11.5□□□□□ -0.57
MSL3-201ENST00000312196 MRC1P22897 1456 aa11.5□□□□□ -0.57
MSL3-201ENST00000312196 GIGYF1O75420 1035 aaPredicted RBP11.49□□□□□ -0.57
MSL3-201ENST00000312196 ADRA2BP18089 450 aa11.49□□□□□ -0.57
MSL3-201ENST00000312196 IL13P35225 146 aa11.49□□□□□ -0.57
MSL3-201ENST00000312196 COL5A3P25940 1745 aaPredicted RBP11.49□□□□□ -0.57
MSL3-201ENST00000312196 SCN11AQ9UI33 1791 aa11.49□□□□□ -0.57
MSL3-201ENST00000312196 PIGBQ92521 554 aa11.48□□□□□ -0.57
MSL3-201ENST00000312196 SYTL4Q96C24 671 aaPredicted RBP11.48□□□□□ -0.57
MSL3-201ENST00000312196 COL3A1P02461 1466 aaPredicted RBP11.48□□□□□ -0.57
MSL3-201ENST00000312196 KIF13BQ9NQT8 1826 aa11.47□□□□□ -0.57
MSL3-201ENST00000312196 TMOD3Q9NYL9 352 aa11.47□□□□□ -0.57
MSL3-201ENST00000312196 KAT6BQ8WYB5 2073 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms