RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 SLF2Q8IX21 1173 aa13.34□□□□□ -0.27
VCPIP1-201ENST00000310421 SLC4A2P04920 1241 aa13.33□□□□□ -0.27
VCPIP1-201ENST00000310421 PPP4R3AQ6IN85 833 aa13.33□□□□□ -0.27
VCPIP1-201ENST00000310421 MTMR7Q9Y216 660 aa13.33□□□□□ -0.27
VCPIP1-201ENST00000310421 ZSCAN31Q96LW9 406 aaPredicted RBP13.33□□□□□ -0.28
VCPIP1-201ENST00000310421 ERLIN1O75477 346 aa13.33□□□□□ -0.28
VCPIP1-201ENST00000310421 MPHOSPH10O00566 681 aaKnown RBP13.33□□□□□ -0.28
VCPIP1-201ENST00000310421 PHAXQ9H814 394 aaKnown RBP13.33□□□□□ -0.28
VCPIP1-201ENST00000310421 PPP1R1BQ9UD71 204 aaPredicted RBP13.33□□□□□ -0.28
VCPIP1-201ENST00000310421 ADAMTS8Q9UP79 889 aa13.33□□□□□ -0.28
VCPIP1-201ENST00000310421 TNMDQ9H2S6 317 aa13.33□□□□□ -0.28
VCPIP1-201ENST00000310421 ADGRL1O94910 1474 aa13.33□□□□□ -0.28
VCPIP1-201ENST00000310421 ABCC11Q96J66 1382 aa13.33□□□□□ -0.28
VCPIP1-201ENST00000310421 ABCA10Q8WWZ4 1543 aa13.33□□□□□ -0.28
VCPIP1-201ENST00000310421 CCDC66A2RUB6 948 aa13.32□□□□□ -0.28
VCPIP1-201ENST00000310421 SERPINC1P01008 464 aa13.32□□□□□ -0.28
VCPIP1-201ENST00000310421 CCDC181Q5TID7 509 aa13.32□□□□□ -0.28
VCPIP1-201ENST00000310421 LEKR1Q6ZMV7 388 aa13.32□□□□□ -0.28
VCPIP1-201ENST00000310421 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
VCPIP1-201ENST00000310421 NOB1Q9ULX3 412 aaKnown RBP13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 ZPR1O75312 459 aa13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 FCHSD2O94868 740 aa13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 AACSQ86V21 672 aa13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 CEP57L1Q8IYX8 460 aa13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 EIF3JO75822 258 aaKnown RBP13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 CCDC196A0A1B0GTZ2 297 aa13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 SULT6B1Q6IMI4 303 aa13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 EHMT1Q9H9B1 1298 aa13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 MAP3K1Q13233 1512 aa13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 AFAP1Q8N556 730 aa13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 ZNF397Q8NF99 534 aaPredicted RBP13.31□□□□□ -0.28
VCPIP1-201ENST00000310421 AMOTQ4VCS5 1084 aa13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 NSD2O96028 1365 aa13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 RAPGEF6Q8TEU7 1601 aa13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 CDK13Q14004 1512 aaKnown RBP13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 GNAT3A8MTJ3 354 aa13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 ZNF76P36508 570 aa13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 CETN2P41208 172 aa13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 NSD3Q9BZ95 1437 aa13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 HSP90AB3PQ58FF7 597 aa13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 JAKMIP3Q5VZ66 844 aa13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 CEP126Q9P2H0 1117 aa13.3□□□□□ -0.28
VCPIP1-201ENST00000310421 RAB11FIP3O75154 756 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 AXDND1Q5T1B0 1012 aaPredicted RBP13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 ATF7IPQ6VMQ6 1270 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 AIDAQ96BJ3 306 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 FIBPO43427 364 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 CCDC150Q8NCX0 1101 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 VPS36Q86VN1 386 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 RAB34Q9BZG1 259 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 LRP2BPQ9P2M1 347 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 MATR3P43243 847 aaKnown RBP eCLIP13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 ENOX2Q16206 610 aaKnown RBP13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 CFAP70Q5T0N1 1121 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 IL27Q8NEV9 243 aa13.29□□□□□ -0.28
VCPIP1-201ENST00000310421 TTLL5Q6EMB2 1281 aa13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 BLOC1S2Q6QNY1 142 aa13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 NEBLO76041 1014 aa13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 MVPQ14764 893 aaKnown RBP13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 CAVIN4Q5BKX8 364 aa13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 ARHGEF11O15085 1522 aa13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 KIAA0754O94854 1291 aa13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 NEFHP12036 1026 aa13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 TANGO6Q9C0B7 1094 aa13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 NKTRP30414 1462 aaKnown RBP13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 FGFR1OPO95684 399 aaKnown RBP13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
VCPIP1-201ENST00000310421 SMTNL1A8MU46 457 aa13.27□□□□□ -0.28
VCPIP1-201ENST00000310421 CABP1Q9NZU7 370 aa13.27□□□□□ -0.28
VCPIP1-201ENST00000310421 CIZ1Q9ULV3 898 aaPredicted RBP13.27□□□□□ -0.28
VCPIP1-201ENST00000310421 SRGAP3O43295 1099 aa13.27□□□□□ -0.29
VCPIP1-201ENST00000310421 NUP133Q8WUM0 1156 aa13.27□□□□□ -0.29
VCPIP1-201ENST00000310421 INCENPQ9NQS7 918 aa13.27□□□□□ -0.29
VCPIP1-201ENST00000310421 FAM177BA6PVY3 158 aa13.27□□□□□ -0.29
VCPIP1-201ENST00000310421 MYL6BP14649 208 aa13.27□□□□□ -0.29
VCPIP1-201ENST00000310421 DDX54Q8TDD1 881 aaKnown RBP13.27□□□□□ -0.29
VCPIP1-201ENST00000310421 KIF2AO00139 706 aaPredicted RBP13.27□□□□□ -0.29
VCPIP1-201ENST00000310421 TMOD3Q9NYL9 352 aa13.27□□□□□ -0.29
VCPIP1-201ENST00000310421 WDR97A6NE52 1622 aa13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 LARP1BQ659C4 914 aaKnown RBP13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 RAI14Q9P0K7 980 aa13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 SPATA32Q96LK8 384 aa13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 SIL1Q9H173 461 aa13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 PRXQ9BXM0 1461 aa13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 MPHOSPH6Q99547 160 aaKnown RBP13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 TEX14Q8IWB6 1497 aa13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 K7ELQ4 463 aaPredicted RBP13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 TTC21BQ7Z4L5 1316 aa13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 HMGB1P09429 215 aaKnown RBP13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 EXOSC9Q06265 439 aaKnown RBP13.26□□□□□ -0.29
VCPIP1-201ENST00000310421 ZHX3Q9H4I2 956 aa13.25□□□□□ -0.29
VCPIP1-201ENST00000310421 ZSCAN29Q8IWY8 852 aaPredicted RBP13.25□□□□□ -0.29
VCPIP1-201ENST00000310421 AKNAQ7Z591 1439 aa13.25□□□□□ -0.29
VCPIP1-201ENST00000310421 ANKIB1Q9P2G1 1089 aa13.25□□□□□ -0.29
VCPIP1-201ENST00000310421 SETD1BQ9UPS6 1966 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms