RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
EIF3F-201ENST00000309828 CHRNA2Q15822 529 aa18.28■□□□□ 0.52
EIF3F-201ENST00000309828 MAP3K5Q99683 1374 aa18.28■□□□□ 0.52
EIF3F-201ENST00000309828 TSR2Q969E8 191 aaKnown RBP18.27■□□□□ 0.52
EIF3F-201ENST00000309828 FAM83GA6ND36 823 aa18.26■□□□□ 0.51
EIF3F-201ENST00000309828 CSB-PGBD3P0DP91 1061 aa18.26■□□□□ 0.51
EIF3F-201ENST00000309828 ZNF428Q96B54 188 aa18.26■□□□□ 0.51
EIF3F-201ENST00000309828 THUMPD2Q9BTF0 503 aaKnown RBP18.26■□□□□ 0.51
EIF3F-201ENST00000309828 NLRP2Q9NX02 1062 aa18.26■□□□□ 0.51
EIF3F-201ENST00000309828 LRRC37A3O60309 1634 aa18.26■□□□□ 0.51
EIF3F-201ENST00000309828 WDR17Q8IZU2 1322 aa18.25■□□□□ 0.51
EIF3F-201ENST00000309828 CRB1P82279 1406 aa18.25■□□□□ 0.51
EIF3F-201ENST00000309828 PIP4K2BP78356 416 aa18.25■□□□□ 0.51
EIF3F-201ENST00000309828 EXOSC9Q06265 439 aaKnown RBP18.25■□□□□ 0.51
EIF3F-201ENST00000309828 COL5A2P05997 1499 aaPredicted RBP18.25■□□□□ 0.51
EIF3F-201ENST00000309828 HSPA1LP34931 641 aa18.24■□□□□ 0.51
EIF3F-201ENST00000309828 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
EIF3F-201ENST00000309828 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
EIF3F-201ENST00000309828 RAPGEF4Q8WZA2 1011 aa18.24■□□□□ 0.51
EIF3F-201ENST00000309828 BABAM1Q9NWV8 329 aa18.24■□□□□ 0.51
EIF3F-201ENST00000309828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.24■□□□□ 0.51
EIF3F-201ENST00000309828 LAS1LQ9Y4W2 734 aaKnown RBP18.24■□□□□ 0.51
EIF3F-201ENST00000309828 COL14A1Q05707 1796 aaKnown RBP18.24■□□□□ 0.51
EIF3F-201ENST00000309828 CHL1O00533 1208 aa18.23■□□□□ 0.51
EIF3F-201ENST00000309828 TATP17735 454 aaPredicted RBP18.23■□□□□ 0.51
EIF3F-201ENST00000309828 RARSP54136 660 aaKnown RBP18.23■□□□□ 0.51
EIF3F-201ENST00000309828 AKAP4Q5JQC9 854 aa18.23■□□□□ 0.51
EIF3F-201ENST00000309828 MCM10Q7L590 875 aa18.23■□□□□ 0.51
EIF3F-201ENST00000309828 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
EIF3F-201ENST00000309828 OVOS2A0A0G2JMS6 1433 aa18.23■□□□□ 0.51
EIF3F-201ENST00000309828 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
EIF3F-201ENST00000309828 PPP4R2Q9NY27 417 aa18.21■□□□□ 0.51
EIF3F-201ENST00000309828 CEMIPQ8WUJ3 1361 aa18.2■□□□□ 0.5
EIF3F-201ENST00000309828 ALDH1L2Q3SY69 923 aa18.2■□□□□ 0.5
EIF3F-201ENST00000309828 C1orf141Q5JVX7 400 aa18.2■□□□□ 0.5
EIF3F-201ENST00000309828 SPG7Q9UQ90 795 aa18.2■□□□□ 0.5
EIF3F-201ENST00000309828 BCAR3O75815 825 aa18.19■□□□□ 0.5
EIF3F-201ENST00000309828 CARD10Q9BWT7 1032 aa18.19■□□□□ 0.5
EIF3F-201ENST00000309828 EVA1CP58658 441 aa18.18■□□□□ 0.5
EIF3F-201ENST00000309828 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
EIF3F-201ENST00000309828 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
EIF3F-201ENST00000309828 MEGF6O75095 1541 aa18.18■□□□□ 0.5
EIF3F-201ENST00000309828 PKD1L3Q7Z443 1732 aa18.18■□□□□ 0.5
EIF3F-201ENST00000309828 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
EIF3F-201ENST00000309828 PLIN1O60240 522 aa18.17■□□□□ 0.5
EIF3F-201ENST00000309828 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
EIF3F-201ENST00000309828 ADAMTS7Q9UKP4 1686 aa18.16■□□□□ 0.5
EIF3F-201ENST00000309828 VAMP4O75379 141 aa18.16■□□□□ 0.5
EIF3F-201ENST00000309828 BRPF1P55201 1214 aaPredicted RBP18.16■□□□□ 0.5
EIF3F-201ENST00000309828 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
EIF3F-201ENST00000309828 SOS1Q07889 1333 aaPredicted RBP18.16■□□□□ 0.5
EIF3F-201ENST00000309828 MS4A1P11836 297 aa18.15■□□□□ 0.5
EIF3F-201ENST00000309828 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
EIF3F-201ENST00000309828 TWISTNBQ3B726 338 aaPredicted RBP18.15■□□□□ 0.5
EIF3F-201ENST00000309828 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
EIF3F-201ENST00000309828 SSH1Q8WYL5 1049 aa18.14■□□□□ 0.49
EIF3F-201ENST00000309828 SMC4Q9NTJ3 1288 aa18.14■□□□□ 0.49
EIF3F-201ENST00000309828 BTG4Q9NY30 223 aa18.14■□□□□ 0.49
EIF3F-201ENST00000309828 JCADQ9P266 1359 aa18.14■□□□□ 0.49
EIF3F-201ENST00000309828 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
EIF3F-201ENST00000309828 HSP90AB1P08238 724 aaKnown RBP18.13■□□□□ 0.49
EIF3F-201ENST00000309828 IFNL2Q8IZJ0 200 aa18.13■□□□□ 0.49
EIF3F-201ENST00000309828 KIF16BQ96L93 1317 aa18.13■□□□□ 0.49
EIF3F-201ENST00000309828 IL2RBP14784 551 aa18.12■□□□□ 0.49
EIF3F-201ENST00000309828 LARP1Q6PKG0 1096 aaKnown RBP18.12■□□□□ 0.49
EIF3F-201ENST00000309828 C8orf58Q8NAV2 365 aa18.12■□□□□ 0.49
EIF3F-201ENST00000309828 STRN4Q9NRL3 753 aa18.12■□□□□ 0.49
EIF3F-201ENST00000309828 IPO8O15397 1037 aaKnown RBP18.11■□□□□ 0.49
EIF3F-201ENST00000309828 PHKG2P15735 406 aa18.11■□□□□ 0.49
EIF3F-201ENST00000309828 TEFQ10587 303 aa18.11■□□□□ 0.49
EIF3F-201ENST00000309828 ZKSCAN2Q63HK3 967 aa18.11■□□□□ 0.49
EIF3F-201ENST00000309828 TSPYL6Q8N831 410 aa18.11■□□□□ 0.49
EIF3F-201ENST00000309828 EXOC6Q8TAG9 804 aa18.11■□□□□ 0.49
EIF3F-201ENST00000309828 LGR6Q9HBX8 967 aa18.11■□□□□ 0.49
EIF3F-201ENST00000309828 PLCH1Q4KWH8 1693 aa18.1■□□□□ 0.49
EIF3F-201ENST00000309828 C20orf194Q5TEA3 1177 aa18.1■□□□□ 0.49
EIF3F-201ENST00000309828 MPRIPQ6WCQ1 1025 aa18.1■□□□□ 0.49
EIF3F-201ENST00000309828 CRBNQ96SW2 442 aa18.1■□□□□ 0.49
EIF3F-201ENST00000309828 PCDH11XQ9BZA7 1347 aa18.09■□□□□ 0.49
EIF3F-201ENST00000309828 PCDH11YQ9BZA8 1340 aa18.09■□□□□ 0.49
EIF3F-201ENST00000309828 FRAT1Q92837 279 aaPredicted RBP18.09■□□□□ 0.49
EIF3F-201ENST00000309828 BCL2L13Q9BXK5 485 aa18.09■□□□□ 0.49
EIF3F-201ENST00000309828 KDM3BQ7LBC6 1761 aa18.09■□□□□ 0.49
EIF3F-201ENST00000309828 NWD2Q9ULI1 1742 aa18.09■□□□□ 0.49
EIF3F-201ENST00000309828 AAMPQ13685 434 aa18.08■□□□□ 0.48
EIF3F-201ENST00000309828 MRPL50Q8N5N7 158 aaKnown RBP18.08■□□□□ 0.48
EIF3F-201ENST00000309828 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.48
EIF3F-201ENST00000309828 ARHGAP45Q92619 1136 aa18.08■□□□□ 0.48
EIF3F-201ENST00000309828 DCAF5Q96JK2 942 aa18.08■□□□□ 0.48
EIF3F-201ENST00000309828 CHMP4AQ9BY43 222 aa18.08■□□□□ 0.48
EIF3F-201ENST00000309828 SCN11AQ9UI33 1791 aa18.08■□□□□ 0.48
EIF3F-201ENST00000309828 NRAPQ86VF7 1730 aa18.08■□□□□ 0.48
EIF3F-201ENST00000309828 MRC1P22897 1456 aa18.07■□□□□ 0.48
EIF3F-201ENST00000309828 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
EIF3F-201ENST00000309828 SPATA31A6Q5VVP1 1343 aa18.07■□□□□ 0.48
EIF3F-201ENST00000309828 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
EIF3F-201ENST00000309828 SIPA1L3O60292 1781 aaPredicted RBP18.07■□□□□ 0.48
EIF3F-201ENST00000309828 KDM6AO15550 1401 aaPredicted RBP18.06■□□□□ 0.48
EIF3F-201ENST00000309828 ELL2O00472 640 aaPredicted RBP18.06■□□□□ 0.48
EIF3F-201ENST00000309828 ADAMTS2O95450 1211 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms