RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 DOLKQ9UPQ8 538 aa8.89□□□□□ -0.99
GPBP1-202ENST00000309096 SPINT1O43278 529 aa8.87□□□□□ -0.99
GPBP1-202ENST00000309096 UPP2O95045 317 aa8.87□□□□□ -0.99
GPBP1-202ENST00000309096 MYCP01106 439 aaPredicted RBP8.87□□□□□ -0.99
GPBP1-202ENST00000309096 SNRPBP14678 240 aaKnown RBP8.87□□□□□ -0.99
GPBP1-202ENST00000309096 SENP2Q9HC62 589 aa8.87□□□□□ -0.99
GPBP1-202ENST00000309096 WFS1O76024 890 aa8.86□□□□□ -0.99
GPBP1-202ENST00000309096 USP4Q13107 963 aa8.86□□□□□ -0.99
GPBP1-202ENST00000309096 SCARF1Q14162 830 aa8.86□□□□□ -0.99
GPBP1-202ENST00000309096 C6orf118Q5T5N4 469 aa8.86□□□□□ -0.99
GPBP1-202ENST00000309096 KIFC2Q96AC6 838 aa8.86□□□□□ -0.99
GPBP1-202ENST00000309096 BMP2P12643 396 aa8.86□□□□□ -0.99
GPBP1-202ENST00000309096 RELBQ01201 579 aa8.86□□□□□ -0.99
GPBP1-202ENST00000309096 SOS2Q07890 1332 aaPredicted RBP8.85□□□□□ -0.99
GPBP1-202ENST00000309096 SKIP12755 728 aa8.85□□□□□ -0.99
GPBP1-202ENST00000309096 PTGIRP43119 386 aa8.85□□□□□ -0.99
GPBP1-202ENST00000309096 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
GPBP1-202ENST00000309096 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
GPBP1-202ENST00000309096 ATP5J2-PTCD1G3V325 749 aa8.84□□□□□ -0.99
GPBP1-202ENST00000309096 EML3Q32P44 896 aa8.84□□□□□ -0.99
GPBP1-202ENST00000309096 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
GPBP1-202ENST00000309096 TIMELESSQ9UNS1 1208 aa8.84□□□□□ -0.99
GPBP1-202ENST00000309096 USP17L5A8MUK1 530 aa8.83□□□□□ -1
GPBP1-202ENST00000309096 ATP9BO43861 1147 aa8.83□□□□□ -1
GPBP1-202ENST00000309096 CYP2U1Q7Z449 544 aa8.83□□□□□ -1
GPBP1-202ENST00000309096 ZNF395Q9H8N7 513 aaPredicted RBP8.83□□□□□ -1
GPBP1-202ENST00000309096 SERPINA10Q9UK55 444 aa8.83□□□□□ -1
GPBP1-202ENST00000309096 CTSOP43234 321 aaPredicted RBP8.82□□□□□ -1
GPBP1-202ENST00000309096 NCOA4Q13772 614 aa8.82□□□□□ -1
GPBP1-202ENST00000309096 PLEKHM2Q8IWE5 1019 aa8.82□□□□□ -1
GPBP1-202ENST00000309096 CCDC97Q96F63 343 aaPredicted RBP8.82□□□□□ -1
GPBP1-202ENST00000309096 INSM2Q96T92 566 aaPredicted RBP8.82□□□□□ -1
GPBP1-202ENST00000309096 FOXD4L5Q5VV16 416 aaPredicted RBP8.81□□□□□ -1
GPBP1-202ENST00000309096 DNMT3LQ9UJW3 386 aa8.81□□□□□ -1
GPBP1-202ENST00000309096 A0A1W2PRU2 124 aa8.8□□□□□ -1
GPBP1-202ENST00000309096 USP17L3A6NCW0 530 aa8.8□□□□□ -1
GPBP1-202ENST00000309096 USP17L4A6NCW7 530 aa8.8□□□□□ -1
GPBP1-202ENST00000309096 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
GPBP1-202ENST00000309096 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
GPBP1-202ENST00000309096 DEPDC4Q8N2C3 294 aa8.8□□□□□ -1
GPBP1-202ENST00000309096 PPP1R12CQ9BZL4 782 aa8.8□□□□□ -1
GPBP1-202ENST00000309096 ARHGEF10LQ9HCE6 1279 aa8.8□□□□□ -1
GPBP1-202ENST00000309096 NOD1Q9Y239 953 aa8.8□□□□□ -1
GPBP1-202ENST00000309096 PALM3A6NDB9 673 aaPredicted RBP8.79□□□□□ -1
GPBP1-202ENST00000309096 TTLL8A6PVC2 850 aa8.79□□□□□ -1
GPBP1-202ENST00000309096 SOBPA7XYQ1 873 aa8.79□□□□□ -1
GPBP1-202ENST00000309096 GNRH1P01148 92 aa8.79□□□□□ -1
GPBP1-202ENST00000309096 CLN3Q13286 438 aa8.79□□□□□ -1
GPBP1-202ENST00000309096 TRIM50Q86XT4 487 aa8.79□□□□□ -1
GPBP1-202ENST00000309096 RNF217Q8TC41 542 aa8.79□□□□□ -1
GPBP1-202ENST00000309096 TFIP11Q9UBB9 837 aaKnown RBP8.79□□□□□ -1
GPBP1-202ENST00000309096 PCDHGA11Q9Y5H2 935 aa8.79□□□□□ -1
GPBP1-202ENST00000309096 HRH3Q9Y5N1 445 aa8.79□□□□□ -1
GPBP1-202ENST00000309096 MAFBQ9Y5Q3 323 aaPredicted RBP8.79□□□□□ -1
GPBP1-202ENST00000309096 STAU1O95793 577 aaKnown RBP8.78□□□□□ -1
GPBP1-202ENST00000309096 SCNN1DP51172 638 aa8.78□□□□□ -1
GPBP1-202ENST00000309096 INSM1Q01101 510 aaPredicted RBP8.78□□□□□ -1
GPBP1-202ENST00000309096 RAB6BQ9NRW1 208 aa8.78□□□□□ -1
GPBP1-202ENST00000309096 IL2RAP01589 272 aa8.77□□□□□ -1.01
GPBP1-202ENST00000309096 ATP1A2P50993 1020 aa8.77□□□□□ -1.01
GPBP1-202ENST00000309096 NFX1Q12986 1120 aaKnown RBP8.77□□□□□ -1.01
GPBP1-202ENST00000309096 ETNK1Q9HBU6 452 aa8.77□□□□□ -1.01
GPBP1-202ENST00000309096 RNF144AP50876 292 aaPredicted RBP8.76□□□□□ -1.01
GPBP1-202ENST00000309096 ESCO1Q5FWF5 840 aa8.76□□□□□ -1.01
GPBP1-202ENST00000309096 CFAP70Q5T0N1 1121 aa8.76□□□□□ -1.01
GPBP1-202ENST00000309096 POLMQ9NP87 494 aaPredicted RBP8.76□□□□□ -1.01
GPBP1-202ENST00000309096 WASLO00401 505 aaPredicted RBP8.75□□□□□ -1.01
GPBP1-202ENST00000309096 MAN1A2O60476 641 aa8.75□□□□□ -1.01
GPBP1-202ENST00000309096 GPC1P35052 558 aa8.75□□□□□ -1.01
GPBP1-202ENST00000309096 XAGE2Q96GT9 111 aa8.75□□□□□ -1.01
GPBP1-202ENST00000309096 ESYT1Q9BSJ8 1104 aa8.75□□□□□ -1.01
GPBP1-202ENST00000309096 STK17AQ9UEE5 414 aa8.75□□□□□ -1.01
GPBP1-202ENST00000309096 ARID3CA6NKF2 412 aa8.74□□□□□ -1.01
GPBP1-202ENST00000309096 FIGNL2A6NMB9 653 aa8.74□□□□□ -1.01
GPBP1-202ENST00000309096 TMEM229AB2RXF0 380 aa8.74□□□□□ -1.01
GPBP1-202ENST00000309096 MEN1O00255 615 aa8.74□□□□□ -1.01
GPBP1-202ENST00000309096 LMOD1P29536 600 aaPredicted RBP8.74□□□□□ -1.01
GPBP1-202ENST00000309096 GTF2IP78347 998 aa8.74□□□□□ -1.01
GPBP1-202ENST00000309096 CNKSR1Q969H4 720 aa8.74□□□□□ -1.01
GPBP1-202ENST00000309096 C1orf115Q9H7X2 142 aa8.74□□□□□ -1.01
GPBP1-202ENST00000309096 RBM19Q9Y4C8 960 aaKnown RBP8.74□□□□□ -1.01
GPBP1-202ENST00000309096 CLDN10P78369 228 aa8.73□□□□□ -1.01
GPBP1-202ENST00000309096 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.73□□□□□ -1.01
GPBP1-202ENST00000309096 NLRP3Q96P20 1036 aa8.73□□□□□ -1.01
GPBP1-202ENST00000309096 FHDC1Q9C0D6 1143 aaPredicted RBP8.73□□□□□ -1.01
GPBP1-202ENST00000309096 VRTNQ9H8Y1 702 aa8.73□□□□□ -1.01
GPBP1-202ENST00000309096 MKRN1Q9UHC7 482 aaKnown RBP8.73□□□□□ -1.01
GPBP1-202ENST00000309096 KIAA1024Q9UPX6 916 aa8.73□□□□□ -1.01
GPBP1-202ENST00000309096 TERTO14746 1132 aaKnown RBP8.73□□□□□ -1.01
GPBP1-202ENST00000309096 WIPF1O43516 503 aa8.73□□□□□ -1.01
GPBP1-202ENST00000309096 INHAP05111 366 aa8.73□□□□□ -1.01
GPBP1-202ENST00000309096 GDF10P55107 478 aa8.73□□□□□ -1.01
GPBP1-202ENST00000309096 KANK4Q5T7N3 995 aaPredicted RBP8.73□□□□□ -1.01
GPBP1-202ENST00000309096 GRIP2Q9C0E4 1043 aa8.73□□□□□ -1.01
GPBP1-202ENST00000309096 ZBTB7BO15156 539 aaPredicted RBP8.72□□□□□ -1.01
GPBP1-202ENST00000309096 DKK1O94907 266 aa8.72□□□□□ -1.01
GPBP1-202ENST00000309096 LARP1Q6PKG0 1096 aaKnown RBP8.72□□□□□ -1.01
GPBP1-202ENST00000309096 CENPCQ03188 943 aa8.71□□□□□ -1.02
GPBP1-202ENST00000309096 PSME1Q06323 249 aa8.71□□□□□ -1.02
GPBP1-202ENST00000309096 LARGE2Q8N3Y3 721 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms