RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 TRPM3Q9HCF6 1732 aaPredicted RBP30.59■■■□□ 2.49
RFWD2-201ENST00000308769 NOP58Q9Y2X3 529 aaKnown RBP30.59■■■□□ 2.49
RFWD2-201ENST00000308769 LRRC37A3O60309 1634 aa30.58■■■□□ 2.49
RFWD2-201ENST00000308769 RGPD2P0DJD1 1756 aa30.58■■■□□ 2.49
RFWD2-201ENST00000308769 PHRF1Q9P1Y6 1649 aaKnown RBP30.58■■■□□ 2.49
RFWD2-201ENST00000308769 MIS18AQ9NYP9 233 aa30.58■■■□□ 2.49
RFWD2-201ENST00000308769 KIAA0232Q92628 1395 aa30.57■■■□□ 2.48
RFWD2-201ENST00000308769 ABCC4O15439 1325 aa30.57■■■□□ 2.48
RFWD2-201ENST00000308769 HDAC1Q13547 482 aaPredicted RBP30.57■■■□□ 2.48
RFWD2-201ENST00000308769 USHBP1Q8N6Y0 703 aa30.57■■■□□ 2.48
RFWD2-201ENST00000308769 IP6K1Q92551 441 aa30.57■■■□□ 2.48
RFWD2-201ENST00000308769 C1orf167Q5SNV9 1468 aa30.56■■■□□ 2.48
RFWD2-201ENST00000308769 KIF1AQ12756 1690 aa30.56■■■□□ 2.48
RFWD2-201ENST00000308769 ZBTB7CA1YPR0 619 aa30.55■■■□□ 2.48
RFWD2-201ENST00000308769 KCNH5Q8NCM2 988 aa30.55■■■□□ 2.48
RFWD2-201ENST00000308769 C19orf44Q9H6X5 657 aa30.54■■■□□ 2.48
RFWD2-201ENST00000308769 PLEKHG5O94827 1062 aa30.53■■■□□ 2.48
RFWD2-201ENST00000308769 SLIT3O75094 1523 aa30.52■■■□□ 2.48
RFWD2-201ENST00000308769 ZBTB7BO15156 539 aaPredicted RBP30.52■■■□□ 2.48
RFWD2-201ENST00000308769 TSPYL4Q9UJ04 414 aa30.52■■■□□ 2.48
RFWD2-201ENST00000308769 GNAT3A8MTJ3 354 aa30.51■■■□□ 2.47
RFWD2-201ENST00000308769 LMOD2Q6P5Q4 547 aa30.51■■■□□ 2.47
RFWD2-201ENST00000308769 MSH6P52701 1360 aa30.51■■■□□ 2.47
RFWD2-201ENST00000308769 API5Q9BZZ5 524 aaKnown RBP30.5■■■□□ 2.47
RFWD2-201ENST00000308769 HAP1P54257 671 aaPredicted RBP30.5■■■□□ 2.47
RFWD2-201ENST00000308769 TMEM94Q12767 1356 aa30.49■■■□□ 2.47
RFWD2-201ENST00000308769 MAP3K5Q99683 1374 aa30.49■■■□□ 2.47
RFWD2-201ENST00000308769 HTATSF1O43719 755 aaKnown RBP30.49■■■□□ 2.47
RFWD2-201ENST00000308769 GCP02774 474 aa30.49■■■□□ 2.47
RFWD2-201ENST00000308769 NBPF6Q5VWK0 638 aa30.49■■■□□ 2.47
RFWD2-201ENST00000308769 NBPF4Q96M43 638 aa30.49■■■□□ 2.47
RFWD2-201ENST00000308769 ZBTB47Q9UFB7 747 aaPredicted RBP30.49■■■□□ 2.47
RFWD2-201ENST00000308769 KRT28Q7Z3Y7 464 aa30.48■■■□□ 2.47
RFWD2-201ENST00000308769 HSPA2P54652 639 aa30.46■■■□□ 2.47
RFWD2-201ENST00000308769 SMC5Q8IY18 1101 aa30.46■■■□□ 2.47
RFWD2-201ENST00000308769 C1orf115Q9H7X2 142 aa30.46■■■□□ 2.47
RFWD2-201ENST00000308769 RGS12O14924 1447 aa30.46■■■□□ 2.47
RFWD2-201ENST00000308769 MST1RQ04912 1400 aa30.45■■■□□ 2.47
RFWD2-201ENST00000308769 ALS2Q96Q42 1657 aa30.45■■■□□ 2.46
RFWD2-201ENST00000308769 USP19O94966 1318 aa30.44■■■□□ 2.46
RFWD2-201ENST00000308769 ARHGEF25Q86VW2 580 aa30.44■■■□□ 2.46
RFWD2-201ENST00000308769 IL17REQ8NFR9 667 aa30.44■■■□□ 2.46
RFWD2-201ENST00000308769 CHMP4BQ9H444 224 aaKnown RBP30.44■■■□□ 2.46
RFWD2-201ENST00000308769 LRRC59Q96AG4 307 aaKnown RBP30.43■■■□□ 2.46
RFWD2-201ENST00000308769 ATF3P18847 181 aa30.42■■■□□ 2.46
RFWD2-201ENST00000308769 RGPD5Q99666 1765 aa30.42■■■□□ 2.46
RFWD2-201ENST00000308769 DCCP43146 1447 aa30.39■■■□□ 2.46
RFWD2-201ENST00000308769 SLC4A2P04920 1241 aa30.39■■■□□ 2.46
RFWD2-201ENST00000308769 FAM208AQ9UK61 1670 aaKnown RBP30.39■■■□□ 2.46
RFWD2-201ENST00000308769 DDX17Q92841 729 aaKnown RBP30.38■■■□□ 2.45
RFWD2-201ENST00000308769 PTPRCP08575 1304 aa30.37■■■□□ 2.45
RFWD2-201ENST00000308769 INTS3Q68E01 1043 aaKnown RBP30.37■■■□□ 2.45
RFWD2-201ENST00000308769 MED1Q15648 1581 aaPredicted RBP30.36■■■□□ 2.45
RFWD2-201ENST00000308769 SEC24BO95487 1268 aa30.36■■■□□ 2.45
RFWD2-201ENST00000308769 LMO7Q8WWI1 1683 aa30.35■■■□□ 2.45
RFWD2-201ENST00000308769 SIRT2Q8IXJ6 389 aa30.35■■■□□ 2.45
RFWD2-201ENST00000308769 NCOA3Q9Y6Q9 1424 aa30.35■■■□□ 2.45
RFWD2-201ENST00000308769 XIRP1Q702N8 1843 aaKnown RBP30.34■■■□□ 2.45
RFWD2-201ENST00000308769 AXIN2Q9Y2T1 843 aa30.34■■■□□ 2.45
RFWD2-201ENST00000308769 CAMTA1Q9Y6Y1 1673 aa30.34■■■□□ 2.45
RFWD2-201ENST00000308769 NUCB1Q02818 461 aa30.34■■■□□ 2.45
RFWD2-201ENST00000308769 TAF7Q15545 349 aaPredicted RBP30.34■■■□□ 2.45
RFWD2-201ENST00000308769 ANKRD24Q8TF21 1146 aa30.34■■■□□ 2.45
RFWD2-201ENST00000308769 G2E3Q7L622 706 aa30.33■■■□□ 2.45
RFWD2-201ENST00000308769 DDRGK1Q96HY6 314 aa30.33■■■□□ 2.45
RFWD2-201ENST00000308769 CEMIPQ8WUJ3 1361 aa30.33■■■□□ 2.45
RFWD2-201ENST00000308769 NCAPD2Q15021 1401 aa30.33■■■□□ 2.45
RFWD2-201ENST00000308769 CACNA1FO60840 1977 aa30.31■■■□□ 2.44
RFWD2-201ENST00000308769 LNPKQ9C0E8 428 aa30.31■■■□□ 2.44
RFWD2-201ENST00000308769 ZC3H6P61129 1189 aaKnown RBP30.29■■■□□ 2.44
RFWD2-201ENST00000308769 CADPS2Q86UW7 1296 aa30.29■■■□□ 2.44
RFWD2-201ENST00000308769 CHD1LQ86WJ1 897 aa30.29■■■□□ 2.44
RFWD2-201ENST00000308769 LGR6Q9HBX8 967 aa30.29■■■□□ 2.44
RFWD2-201ENST00000308769 BABAM1Q9NWV8 329 aa30.29■■■□□ 2.44
RFWD2-201ENST00000308769 PXDNQ92626 1479 aa30.28■■■□□ 2.44
RFWD2-201ENST00000308769 GCC1Q96CN9 775 aa30.28■■■□□ 2.44
RFWD2-201ENST00000308769 STRCQ7RTU9 1775 aa30.28■■■□□ 2.44
RFWD2-201ENST00000308769 KDM3BQ7LBC6 1761 aa30.28■■■□□ 2.44
RFWD2-201ENST00000308769 NECTIN2Q92692 538 aa30.28■■■□□ 2.44
RFWD2-201ENST00000308769 STK31Q9BXU1 1019 aa30.28■■■□□ 2.44
RFWD2-201ENST00000308769 ZNF530Q6P9A1 599 aaPredicted RBP30.27■■■□□ 2.44
RFWD2-201ENST00000308769 F6X3S4 739 aa30.26■■■□□ 2.43
RFWD2-201ENST00000308769 LMTK3Q96Q04 1460 aa30.25■■■□□ 2.43
RFWD2-201ENST00000308769 CCDC30Q5VVM6 783 aa30.25■■■□□ 2.43
RFWD2-201ENST00000308769 ATP10DQ9P241 1426 aa30.25■■■□□ 2.43
RFWD2-201ENST00000308769 PLEKHO1Q53GL0 409 aaPredicted RBP30.25■■■□□ 2.43
RFWD2-201ENST00000308769 ANKRD45Q5TZF3 282 aa30.25■■■□□ 2.43
RFWD2-201ENST00000308769 AKAP4Q5JQC9 854 aa30.24■■■□□ 2.43
RFWD2-201ENST00000308769 ERBB3P21860 1342 aa30.24■■■□□ 2.43
RFWD2-201ENST00000308769 NPHP3Q7Z494 1330 aa30.24■■■□□ 2.43
RFWD2-201ENST00000308769 MEIS3Q99687 375 aa30.23■■■□□ 2.43
RFWD2-201ENST00000308769 SLC4A10Q6U841 1118 aa30.23■■■□□ 2.43
RFWD2-201ENST00000308769 AMOTQ4VCS5 1084 aa30.22■■■□□ 2.43
RFWD2-201ENST00000308769 CRYBG1Q9Y4K1 1723 aa30.21■■■□□ 2.43
RFWD2-201ENST00000308769 SOS1Q07889 1333 aaPredicted RBP30.21■■■□□ 2.43
RFWD2-201ENST00000308769 FLIIQ13045 1269 aa30.21■■■□□ 2.43
RFWD2-201ENST00000308769 MPRIPQ6WCQ1 1025 aa30.21■■■□□ 2.43
RFWD2-201ENST00000308769 TNS3Q68CZ2 1445 aa30.21■■■□□ 2.43
RFWD2-201ENST00000308769 KDM4FA0A1W2PPD8 638 aa30.2■■■□□ 2.43
RFWD2-201ENST00000308769 COL18A1P39060 1754 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms