RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 REREQ9P2R6 1566 aa17.7■□□□□ 0.42
LRRFIP1-203ENST00000308482 CFAP44Q96MT7 982 aa17.7■□□□□ 0.42
LRRFIP1-203ENST00000308482 ANKRD44Q8N8A2 993 aa17.69■□□□□ 0.42
LRRFIP1-203ENST00000308482 ZRANB1Q9UGI0 708 aa17.69■□□□□ 0.42
LRRFIP1-203ENST00000308482 YTHDC2Q9H6S0 1430 aaKnown RBP17.69■□□□□ 0.42
LRRFIP1-203ENST00000308482 ATP10DQ9P241 1426 aa17.69■□□□□ 0.42
LRRFIP1-203ENST00000308482 CDC42BPGQ6DT37 1551 aa17.69■□□□□ 0.42
LRRFIP1-203ENST00000308482 HECW2Q9P2P5 1572 aa17.69■□□□□ 0.42
LRRFIP1-203ENST00000308482 CEP85Q6P2H3 762 aa17.69■□□□□ 0.42
LRRFIP1-203ENST00000308482 MPNDQ8N594 471 aa17.69■□□□□ 0.42
LRRFIP1-203ENST00000308482 FOXD4L6Q3SYB3 417 aaPredicted RBP17.68■□□□□ 0.42
LRRFIP1-203ENST00000308482 FOXD4L3Q6VB84 417 aaPredicted RBP17.68■□□□□ 0.42
LRRFIP1-203ENST00000308482 ASXL2Q76L83 1435 aa17.68■□□□□ 0.42
LRRFIP1-203ENST00000308482 IL13P35225 146 aa17.68■□□□□ 0.42
LRRFIP1-203ENST00000308482 NOL8Q76FK4 1167 aaKnown RBP17.68■□□□□ 0.42
LRRFIP1-203ENST00000308482 NEK4P51957 841 aa17.67■□□□□ 0.42
LRRFIP1-203ENST00000308482 CASC1Q6TDU7 716 aa17.67■□□□□ 0.42
LRRFIP1-203ENST00000308482 MEIS3Q99687 375 aa17.67■□□□□ 0.42
LRRFIP1-203ENST00000308482 TSHZ3Q63HK5 1081 aa17.67■□□□□ 0.42
LRRFIP1-203ENST00000308482 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
LRRFIP1-203ENST00000308482 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
LRRFIP1-203ENST00000308482 TMX3Q96JJ7 454 aa17.66■□□□□ 0.42
LRRFIP1-203ENST00000308482 KIF20BQ96Q89 1820 aa17.66■□□□□ 0.42
LRRFIP1-203ENST00000308482 JARID2Q92833 1246 aaPredicted RBP17.66■□□□□ 0.42
LRRFIP1-203ENST00000308482 REC8O95072 547 aa17.65■□□□□ 0.42
LRRFIP1-203ENST00000308482 MSH6P52701 1360 aa17.65■□□□□ 0.42
LRRFIP1-203ENST00000308482 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
LRRFIP1-203ENST00000308482 ERC2O15083 957 aa17.65■□□□□ 0.42
LRRFIP1-203ENST00000308482 NME9Q86XW9 330 aa17.65■□□□□ 0.42
LRRFIP1-203ENST00000308482 CCDC39Q9UFE4 941 aa17.65■□□□□ 0.42
LRRFIP1-203ENST00000308482 YEATS2Q9ULM3 1422 aa17.64■□□□□ 0.42
LRRFIP1-203ENST00000308482 RRS1Q15050 365 aaKnown RBP17.64■□□□□ 0.41
LRRFIP1-203ENST00000308482 GDPD2Q9HCC8 539 aa17.64■□□□□ 0.41
LRRFIP1-203ENST00000308482 WAPLQ7Z5K2 1190 aa17.64■□□□□ 0.41
LRRFIP1-203ENST00000308482 DLG5Q8TDM6 1919 aa17.64■□□□□ 0.41
LRRFIP1-203ENST00000308482 RGS12O14924 1447 aa17.64■□□□□ 0.41
LRRFIP1-203ENST00000308482 RPAP2Q8IXW5 612 aaPredicted RBP17.63■□□□□ 0.41
LRRFIP1-203ENST00000308482 PRDM4Q9UKN5 801 aa17.63■□□□□ 0.41
LRRFIP1-203ENST00000308482 RTL1A6NKG5 1358 aa17.63■□□□□ 0.41
LRRFIP1-203ENST00000308482 POGZQ7Z3K3 1410 aa17.63■□□□□ 0.41
LRRFIP1-203ENST00000308482 MYO5BQ9ULV0 1848 aa17.63■□□□□ 0.41
LRRFIP1-203ENST00000308482 PTMAP06454 111 aaKnown RBP17.62■□□□□ 0.41
LRRFIP1-203ENST00000308482 CSPP1Q1MSJ5 1256 aa17.62■□□□□ 0.41
LRRFIP1-203ENST00000308482 PALD1Q9ULE6 856 aa17.62■□□□□ 0.41
LRRFIP1-203ENST00000308482 RAPGEF3O95398 923 aa17.62■□□□□ 0.41
LRRFIP1-203ENST00000308482 TPRNQ4KMQ1 711 aa17.62■□□□□ 0.41
LRRFIP1-203ENST00000308482 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
LRRFIP1-203ENST00000308482 ZNF830Q96NB3 372 aaPredicted RBP17.62■□□□□ 0.41
LRRFIP1-203ENST00000308482 MAP7D2Q96T17 732 aa17.62■□□□□ 0.41
LRRFIP1-203ENST00000308482 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.62■□□□□ 0.41
LRRFIP1-203ENST00000308482 KIF24Q5T7B8 1368 aa17.61■□□□□ 0.41
LRRFIP1-203ENST00000308482 BRD1O95696 1058 aa17.61■□□□□ 0.41
LRRFIP1-203ENST00000308482 MCM5P33992 734 aa17.61■□□□□ 0.41
LRRFIP1-203ENST00000308482 SASS6Q6UVJ0 657 aa17.61■□□□□ 0.41
LRRFIP1-203ENST00000308482 TSC1Q92574 1164 aa17.61■□□□□ 0.41
LRRFIP1-203ENST00000308482 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
LRRFIP1-203ENST00000308482 DYNC1I1O14576 645 aa17.61■□□□□ 0.41
LRRFIP1-203ENST00000308482 GADD45BO75293 160 aaPredicted RBP17.61■□□□□ 0.41
LRRFIP1-203ENST00000308482 MBD3O95983 291 aa17.61■□□□□ 0.41
LRRFIP1-203ENST00000308482 TSPY26PQ9H489 355 aa17.6■□□□□ 0.41
LRRFIP1-203ENST00000308482 PDE1AP54750 535 aa17.6■□□□□ 0.41
LRRFIP1-203ENST00000308482 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
LRRFIP1-203ENST00000308482 AEBP1Q8IUX7 1158 aa17.6■□□□□ 0.41
LRRFIP1-203ENST00000308482 MCM10Q7L590 875 aa17.59■□□□□ 0.41
LRRFIP1-203ENST00000308482 PRDM10Q9NQV6 1147 aa17.59■□□□□ 0.41
LRRFIP1-203ENST00000308482 MLH3Q9UHC1 1453 aa17.59■□□□□ 0.41
LRRFIP1-203ENST00000308482 EXOC6BQ9Y2D4 811 aa17.58■□□□□ 0.41
LRRFIP1-203ENST00000308482 F6X3S4 739 aa17.57■□□□□ 0.4
LRRFIP1-203ENST00000308482 SLC4A10Q6U841 1118 aa17.57■□□□□ 0.4
LRRFIP1-203ENST00000308482 C17orf53Q8N3J3 647 aaPredicted RBP17.57■□□□□ 0.4
LRRFIP1-203ENST00000308482 UPF3BQ9BZI7 483 aaKnown RBP17.57■□□□□ 0.4
LRRFIP1-203ENST00000308482 NCKAP5LQ9HCH0 1330 aa17.57■□□□□ 0.4
LRRFIP1-203ENST00000308482 DNTTIP2Q5QJE6 756 aaKnown RBP17.57■□□□□ 0.4
LRRFIP1-203ENST00000308482 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
LRRFIP1-203ENST00000308482 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.57■□□□□ 0.4
LRRFIP1-203ENST00000308482 SLC52A1Q9NWF4 448 aa17.56■□□□□ 0.4
LRRFIP1-203ENST00000308482 MIS18AQ9NYP9 233 aa17.56■□□□□ 0.4
LRRFIP1-203ENST00000308482 CUL4AQ13619 759 aa17.56■□□□□ 0.4
LRRFIP1-203ENST00000308482 ESYT1Q9BSJ8 1104 aa17.56■□□□□ 0.4
LRRFIP1-203ENST00000308482 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
LRRFIP1-203ENST00000308482 ANO2Q9NQ90 1003 aa17.55■□□□□ 0.4
LRRFIP1-203ENST00000308482 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
LRRFIP1-203ENST00000308482 FBXO31Q5XUX0 539 aaPredicted RBP17.55■□□□□ 0.4
LRRFIP1-203ENST00000308482 G2E3Q7L622 706 aa17.55■□□□□ 0.4
LRRFIP1-203ENST00000308482 USP48Q86UV5 1035 aa17.55■□□□□ 0.4
LRRFIP1-203ENST00000308482 USP25Q9UHP3 1055 aa17.55■□□□□ 0.4
LRRFIP1-203ENST00000308482 RILPL2Q969X0 211 aa17.54■□□□□ 0.4
LRRFIP1-203ENST00000308482 TTC12Q9H892 705 aaPredicted RBP17.54■□□□□ 0.4
LRRFIP1-203ENST00000308482 CDK12Q9NYV4 1490 aaPredicted RBP17.53■□□□□ 0.4
LRRFIP1-203ENST00000308482 SULT6B1Q6IMI4 303 aa17.53■□□□□ 0.4
LRRFIP1-203ENST00000308482 OSBPL3Q9H4L5 887 aa17.53■□□□□ 0.4
LRRFIP1-203ENST00000308482 TRIM6-TRIM34B2RNG4 842 aa17.52■□□□□ 0.4
LRRFIP1-203ENST00000308482 CHL1O00533 1208 aa17.52■□□□□ 0.4
LRRFIP1-203ENST00000308482 CPSF1Q10570 1443 aaKnown RBP17.52■□□□□ 0.4
LRRFIP1-203ENST00000308482 ALKQ9UM73 1620 aa17.52■□□□□ 0.4
LRRFIP1-203ENST00000308482 TCHHQ07283 1943 aa17.52■□□□□ 0.4
LRRFIP1-203ENST00000308482 IL25Q9H293 177 aa17.52■□□□□ 0.4
LRRFIP1-203ENST00000308482 HMMRO75330 724 aa17.51■□□□□ 0.39
LRRFIP1-203ENST00000308482 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
LRRFIP1-203ENST00000308482 SYAP1Q96A49 352 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms