RNA–Protein interactions for RNA: ENST00000306721.7

CDCA7-201, Transcript of cell division cycle associated 7, humanhuman

TSL 2 BASIC

Gene CDCA7, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-201ENST00000306721 APAF1O14727 1248 aa12.89□□□□□ -0.35
CDCA7-201ENST00000306721 SIPA1L3O60292 1781 aaPredicted RBP12.88□□□□□ -0.35
CDCA7-201ENST00000306721 WWC1Q8IX03 1113 aa12.88□□□□□ -0.35
CDCA7-201ENST00000306721 CEMIPQ8WUJ3 1361 aa12.88□□□□□ -0.35
CDCA7-201ENST00000306721 HSPA1LP34931 641 aa12.88□□□□□ -0.35
CDCA7-201ENST00000306721 SALL2Q9Y467 1007 aaPredicted RBP12.88□□□□□ -0.35
CDCA7-201ENST00000306721 THSD7AQ9UPZ6 1657 aa12.88□□□□□ -0.35
CDCA7-201ENST00000306721 MAP3K5Q99683 1374 aa12.88□□□□□ -0.35
CDCA7-201ENST00000306721 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
CDCA7-201ENST00000306721 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
CDCA7-201ENST00000306721 VPS72Q15906 364 aa12.87□□□□□ -0.35
CDCA7-201ENST00000306721 AKAP4Q5JQC9 854 aa12.87□□□□□ -0.35
CDCA7-201ENST00000306721 SCN11AQ9UI33 1791 aa12.87□□□□□ -0.35
CDCA7-201ENST00000306721 BCL9LQ86UU0 1499 aa12.87□□□□□ -0.35
CDCA7-201ENST00000306721 BCL9O00512 1426 aa12.87□□□□□ -0.35
CDCA7-201ENST00000306721 ATRNO75882 1429 aa12.87□□□□□ -0.35
CDCA7-201ENST00000306721 SLFN5Q08AF3 891 aa12.86□□□□□ -0.35
CDCA7-201ENST00000306721 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
CDCA7-201ENST00000306721 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
CDCA7-201ENST00000306721 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
CDCA7-201ENST00000306721 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
CDCA7-201ENST00000306721 MEGF6O75095 1541 aa12.86□□□□□ -0.35
CDCA7-201ENST00000306721 SPATA31A5Q5VU36 1347 aa12.86□□□□□ -0.35
CDCA7-201ENST00000306721 SPATA31A7Q8IWB4 1347 aa12.86□□□□□ -0.35
CDCA7-201ENST00000306721 SOX12O15370 315 aa12.86□□□□□ -0.35
CDCA7-201ENST00000306721 ZNF853P0CG23 659 aa12.86□□□□□ -0.35
CDCA7-201ENST00000306721 UNC5CLQ8IV45 518 aa12.86□□□□□ -0.35
CDCA7-201ENST00000306721 PHACTR3Q96KR7 559 aa12.86□□□□□ -0.35
CDCA7-201ENST00000306721 IFT57Q9NWB7 429 aa12.86□□□□□ -0.35
CDCA7-201ENST00000306721 AEBP1Q8IUX7 1158 aa12.85□□□□□ -0.35
CDCA7-201ENST00000306721 ZNF428Q96B54 188 aa12.85□□□□□ -0.35
CDCA7-201ENST00000306721 MYH16Q9H6N6 1097 aa12.85□□□□□ -0.35
CDCA7-201ENST00000306721 SPATA31A1Q5TZJ5 1347 aa12.85□□□□□ -0.35
CDCA7-201ENST00000306721 RIPK4P57078 832 aa12.85□□□□□ -0.35
CDCA7-201ENST00000306721 TNS2Q63HR2 1409 aa12.84□□□□□ -0.35
CDCA7-201ENST00000306721 HMOX1P09601 288 aa12.84□□□□□ -0.35
CDCA7-201ENST00000306721 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
CDCA7-201ENST00000306721 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
CDCA7-201ENST00000306721 VIRMAQ69YN4 1812 aaKnown RBP12.84□□□□□ -0.35
CDCA7-201ENST00000306721 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
CDCA7-201ENST00000306721 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
CDCA7-201ENST00000306721 BTG4Q9NY30 223 aa12.84□□□□□ -0.35
CDCA7-201ENST00000306721 PAPPAQ13219 1627 aa12.83□□□□□ -0.35
CDCA7-201ENST00000306721 IL2RBP14784 551 aa12.83□□□□□ -0.36
CDCA7-201ENST00000306721 EVA1CP58658 441 aa12.83□□□□□ -0.36
CDCA7-201ENST00000306721 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
CDCA7-201ENST00000306721 MTHFSDQ2M296 383 aaKnown RBP12.83□□□□□ -0.36
CDCA7-201ENST00000306721 PCDH11XQ9BZA7 1347 aa12.83□□□□□ -0.36
CDCA7-201ENST00000306721 PCDH11YQ9BZA8 1340 aa12.83□□□□□ -0.36
CDCA7-201ENST00000306721 B4GALNT3Q6L9W6 998 aa12.83□□□□□ -0.36
CDCA7-201ENST00000306721 CICQ96RK0 1608 aaPredicted RBP12.83□□□□□ -0.36
CDCA7-201ENST00000306721 GNAI1P63096 354 aa12.82□□□□□ -0.36
CDCA7-201ENST00000306721 CSB-PGBD3P0DP91 1061 aa12.82□□□□□ -0.36
CDCA7-201ENST00000306721 NLRP2Q9NX02 1062 aa12.82□□□□□ -0.36
CDCA7-201ENST00000306721 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
CDCA7-201ENST00000306721 DUSP27Q5VZP5 1158 aa12.81□□□□□ -0.36
CDCA7-201ENST00000306721 TOM1L2Q6ZVM7 507 aa12.81□□□□□ -0.36
CDCA7-201ENST00000306721 CFAP44Q96MT7 982 aa12.81□□□□□ -0.36
CDCA7-201ENST00000306721 RBM19Q9Y4C8 960 aaKnown RBP12.81□□□□□ -0.36
CDCA7-201ENST00000306721 ZNF831Q5JPB2 1677 aa12.81□□□□□ -0.36
CDCA7-201ENST00000306721 CHMP4AQ9BY43 222 aa12.81□□□□□ -0.36
CDCA7-201ENST00000306721 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
CDCA7-201ENST00000306721 LARP1Q6PKG0 1096 aaKnown RBP12.8□□□□□ -0.36
CDCA7-201ENST00000306721 IFNL2Q8IZJ0 200 aa12.8□□□□□ -0.36
CDCA7-201ENST00000306721 PPP4R2Q9NY27 417 aa12.8□□□□□ -0.36
CDCA7-201ENST00000306721 LTV1Q96GA3 475 aaPredicted RBP12.8□□□□□ -0.36
CDCA7-201ENST00000306721 CHL1O00533 1208 aa12.79□□□□□ -0.36
CDCA7-201ENST00000306721 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
CDCA7-201ENST00000306721 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
CDCA7-201ENST00000306721 GLI3P10071 1580 aa12.79□□□□□ -0.36
CDCA7-201ENST00000306721 PHKG2P15735 406 aa12.79□□□□□ -0.36
CDCA7-201ENST00000306721 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
CDCA7-201ENST00000306721 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
CDCA7-201ENST00000306721 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
CDCA7-201ENST00000306721 ZCRB1Q8TBF4 217 aaKnown RBP12.78□□□□□ -0.36
CDCA7-201ENST00000306721 UBR2Q8IWV8 1755 aa12.78□□□□□ -0.36
CDCA7-201ENST00000306721 HOXB7P09629 217 aa12.78□□□□□ -0.36
CDCA7-201ENST00000306721 KDM6AO15550 1401 aaPredicted RBP12.77□□□□□ -0.37
CDCA7-201ENST00000306721 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
CDCA7-201ENST00000306721 RNMTO43148 476 aaKnown RBP12.77□□□□□ -0.37
CDCA7-201ENST00000306721 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
CDCA7-201ENST00000306721 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.37
CDCA7-201ENST00000306721 HEG1Q9ULI3 1381 aa12.76□□□□□ -0.37
CDCA7-201ENST00000306721 ZNF772Q68DY9 489 aaPredicted RBP12.76□□□□□ -0.37
CDCA7-201ENST00000306721 TAF7Q15545 349 aaPredicted RBP12.75□□□□□ -0.37
CDCA7-201ENST00000306721 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
CDCA7-201ENST00000306721 NGLY1Q96IV0 654 aa12.75□□□□□ -0.37
CDCA7-201ENST00000306721 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
CDCA7-201ENST00000306721 USP21Q9UK80 565 aa12.75□□□□□ -0.37
CDCA7-201ENST00000306721 ADAMTS2O95450 1211 aa12.75□□□□□ -0.37
CDCA7-201ENST00000306721 IL17REQ8NFR9 667 aa12.75□□□□□ -0.37
CDCA7-201ENST00000306721 FANCIQ9NVI1 1328 aa12.74□□□□□ -0.37
CDCA7-201ENST00000306721 ALDH1L2Q3SY69 923 aa12.74□□□□□ -0.37
CDCA7-201ENST00000306721 NUTM2BA6NNL0 878 aaPredicted RBP12.74□□□□□ -0.37
CDCA7-201ENST00000306721 NUTM2EB1AL46 878 aaPredicted RBP12.74□□□□□ -0.37
CDCA7-201ENST00000306721 ERICH6BQ5W0A0 696 aa12.74□□□□□ -0.37
CDCA7-201ENST00000306721 NUTM2AQ8IVF1 878 aaPredicted RBP12.74□□□□□ -0.37
CDCA7-201ENST00000306721 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
CDCA7-201ENST00000306721 AFF2P51816 1311 aa12.73□□□□□ -0.37
CDCA7-201ENST00000306721 CYP27B1O15528 508 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms