RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 SPDYE4A6NLX3 237 aa21.97■■□□□ 1.11
RETREG1-201ENST00000306320 VAMP4O75379 141 aa21.97■■□□□ 1.11
RETREG1-201ENST00000306320 GDPD2Q9HCC8 539 aa21.97■■□□□ 1.11
RETREG1-201ENST00000306320 A2ML1A8K2U0 1454 aa21.97■■□□□ 1.11
RETREG1-201ENST00000306320 ACEP12821 1306 aa21.97■■□□□ 1.11
RETREG1-201ENST00000306320 IPO8O15397 1037 aaKnown RBP21.97■■□□□ 1.11
RETREG1-201ENST00000306320 PPP1R9BQ96SB3 815 aa21.97■■□□□ 1.11
RETREG1-201ENST00000306320 PREX1Q8TCU6 1659 aa21.96■■□□□ 1.11
RETREG1-201ENST00000306320 MAPK8IP2Q13387 824 aaPredicted RBP21.96■■□□□ 1.11
RETREG1-201ENST00000306320 ZNF428Q96B54 188 aa21.96■■□□□ 1.11
RETREG1-201ENST00000306320 RBM25P49756 843 aaKnown RBP21.96■■□□□ 1.11
RETREG1-201ENST00000306320 NGDNQ8NEJ9 315 aaKnown RBP21.95■■□□□ 1.1
RETREG1-201ENST00000306320 SLC4A10Q6U841 1118 aa21.95■■□□□ 1.1
RETREG1-201ENST00000306320 TRHP20396 242 aaPredicted RBP21.95■■□□□ 1.1
RETREG1-201ENST00000306320 SNX21Q969T3 373 aa21.95■■□□□ 1.1
RETREG1-201ENST00000306320 ZBTB40Q9NUA8 1239 aa21.95■■□□□ 1.1
RETREG1-201ENST00000306320 NSFL1CQ9UNZ2 370 aaKnown RBP21.95■■□□□ 1.1
RETREG1-201ENST00000306320 ARHGEF40Q8TER5 1519 aa21.94■■□□□ 1.1
RETREG1-201ENST00000306320 KIF2CQ99661 725 aa21.94■■□□□ 1.1
RETREG1-201ENST00000306320 DTNBO60941 627 aa21.94■■□□□ 1.1
RETREG1-201ENST00000306320 EIF4A2Q14240 407 aaKnown RBP21.94■■□□□ 1.1
RETREG1-201ENST00000306320 C16orf71Q8IYS4 520 aaPredicted RBP21.93■■□□□ 1.1
RETREG1-201ENST00000306320 NUCB1Q02818 461 aa21.93■■□□□ 1.1
RETREG1-201ENST00000306320 ROBO2Q9HCK4 1378 aa21.93■■□□□ 1.1
RETREG1-201ENST00000306320 KIF16BQ96L93 1317 aa21.93■■□□□ 1.1
RETREG1-201ENST00000306320 CLTCQ00610 1675 aaKnown RBP21.93■■□□□ 1.1
RETREG1-201ENST00000306320 PTMSP20962 102 aa21.93■■□□□ 1.1
RETREG1-201ENST00000306320 HDAC1Q13547 482 aaPredicted RBP21.92■■□□□ 1.1
RETREG1-201ENST00000306320 NOL7Q9UMY1 257 aaKnown RBP21.91■■□□□ 1.1
RETREG1-201ENST00000306320 ZKSCAN5Q9Y2L8 839 aa21.91■■□□□ 1.1
RETREG1-201ENST00000306320 MRPL50Q8N5N7 158 aaKnown RBP21.91■■□□□ 1.1
RETREG1-201ENST00000306320 ZFYVE9O95405 1425 aa21.9■■□□□ 1.1
RETREG1-201ENST00000306320 DDIT3P35638 169 aa21.9■■□□□ 1.1
RETREG1-201ENST00000306320 AAMPQ13685 434 aa21.9■■□□□ 1.1
RETREG1-201ENST00000306320 USHBP1Q8N6Y0 703 aa21.9■■□□□ 1.1
RETREG1-201ENST00000306320 GNAI1P63096 354 aa21.9■■□□□ 1.1
RETREG1-201ENST00000306320 MAP7D2Q96T17 732 aa21.9■■□□□ 1.1
RETREG1-201ENST00000306320 AMOTL2Q9Y2J4 779 aa21.9■■□□□ 1.1
RETREG1-201ENST00000306320 COL3A1P02461 1466 aaPredicted RBP21.89■■□□□ 1.1
RETREG1-201ENST00000306320 F6X3S4 739 aa21.89■■□□□ 1.09
RETREG1-201ENST00000306320 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.89■■□□□ 1.09
RETREG1-201ENST00000306320 TMEM63CQ9P1W3 806 aa21.89■■□□□ 1.09
RETREG1-201ENST00000306320 GPT2Q8TD30 523 aa21.89■■□□□ 1.09
RETREG1-201ENST00000306320 LMBRD1Q9NUN5 540 aa21.89■■□□□ 1.09
RETREG1-201ENST00000306320 SMARCA5O60264 1052 aaPredicted RBP21.88■■□□□ 1.09
RETREG1-201ENST00000306320 CPS1P31327 1500 aa21.88■■□□□ 1.09
RETREG1-201ENST00000306320 TTC12Q9H892 705 aaPredicted RBP21.88■■□□□ 1.09
RETREG1-201ENST00000306320 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.88■■□□□ 1.09
RETREG1-201ENST00000306320 LRRC7Q96NW7 1537 aa21.88■■□□□ 1.09
RETREG1-201ENST00000306320 AMPHP49418 695 aa21.88■■□□□ 1.09
RETREG1-201ENST00000306320 TTC21BQ7Z4L5 1316 aa21.87■■□□□ 1.09
RETREG1-201ENST00000306320 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
RETREG1-201ENST00000306320 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
RETREG1-201ENST00000306320 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
RETREG1-201ENST00000306320 CDC45O75419 566 aa21.87■■□□□ 1.09
RETREG1-201ENST00000306320 NUCB2P80303 420 aa21.86■■□□□ 1.09
RETREG1-201ENST00000306320 LMOD2Q6P5Q4 547 aa21.86■■□□□ 1.09
RETREG1-201ENST00000306320 SASS6Q6UVJ0 657 aa21.86■■□□□ 1.09
RETREG1-201ENST00000306320 TNRQ92752 1358 aa21.86■■□□□ 1.09
RETREG1-201ENST00000306320 ZBTB7BO15156 539 aaPredicted RBP21.86■■□□□ 1.09
RETREG1-201ENST00000306320 BMP2KLQ5H9B9 411 aa21.86■■□□□ 1.09
RETREG1-201ENST00000306320 CCDC39Q9UFE4 941 aa21.86■■□□□ 1.09
RETREG1-201ENST00000306320 OTUD7AQ8TE49 926 aaPredicted RBP21.86■■□□□ 1.09
RETREG1-201ENST00000306320 HDGFP51858 240 aaKnown RBP21.85■■□□□ 1.09
RETREG1-201ENST00000306320 CSPP1Q1MSJ5 1256 aa21.85■■□□□ 1.09
RETREG1-201ENST00000306320 SIRT2Q8IXJ6 389 aa21.85■■□□□ 1.09
RETREG1-201ENST00000306320 VIRMAQ69YN4 1812 aaKnown RBP21.85■■□□□ 1.09
RETREG1-201ENST00000306320 KIAA2012Q0VF49 1180 aa21.85■■□□□ 1.09
RETREG1-201ENST00000306320 NLRP6P59044 892 aa21.84■■□□□ 1.09
RETREG1-201ENST00000306320 PPP4R3BQ5MIZ7 849 aa21.84■■□□□ 1.09
RETREG1-201ENST00000306320 USP25Q9UHP3 1055 aa21.84■■□□□ 1.09
RETREG1-201ENST00000306320 PNPLA6Q8IY17 1366 aa21.84■■□□□ 1.09
RETREG1-201ENST00000306320 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.84■■□□□ 1.09
RETREG1-201ENST00000306320 DYNC1I1O14576 645 aa21.83■■□□□ 1.08
RETREG1-201ENST00000306320 CFAP44Q96MT7 982 aa21.82■■□□□ 1.08
RETREG1-201ENST00000306320 ST18O60284 1047 aa21.82■■□□□ 1.08
RETREG1-201ENST00000306320 SLC4A2P04920 1241 aa21.82■■□□□ 1.08
RETREG1-201ENST00000306320 TSHZ3Q63HK5 1081 aa21.82■■□□□ 1.08
RETREG1-201ENST00000306320 EID1Q9Y6B2 187 aa21.82■■□□□ 1.08
RETREG1-201ENST00000306320 NEK4P51957 841 aa21.82■■□□□ 1.08
RETREG1-201ENST00000306320 IL16Q14005 1332 aa21.81■■□□□ 1.08
RETREG1-201ENST00000306320 G2E3Q7L622 706 aa21.81■■□□□ 1.08
RETREG1-201ENST00000306320 IFT57Q9NWB7 429 aa21.81■■□□□ 1.08
RETREG1-201ENST00000306320 CT47B1P0C2W7 299 aaPredicted RBP21.81■■□□□ 1.08
RETREG1-201ENST00000306320 FAM135BQ49AJ0 1406 aa21.81■■□□□ 1.08
RETREG1-201ENST00000306320 SPC24Q8NBT2 197 aa21.81■■□□□ 1.08
RETREG1-201ENST00000306320 ZNF445P59923 1031 aa21.8■■□□□ 1.08
RETREG1-201ENST00000306320 LARP6Q9BRS8 491 aaKnown RBP21.8■■□□□ 1.08
RETREG1-201ENST00000306320 CHMP3Q9Y3E7 222 aa21.8■■□□□ 1.08
RETREG1-201ENST00000306320 DIP2BQ9P265 1576 aa21.8■■□□□ 1.08
RETREG1-201ENST00000306320 MAP2P11137 1827 aaKnown RBP21.8■■□□□ 1.08
RETREG1-201ENST00000306320 ALDH1L2Q3SY69 923 aa21.79■■□□□ 1.08
RETREG1-201ENST00000306320 RABEP1Q15276 862 aa21.79■■□□□ 1.08
RETREG1-201ENST00000306320 MAP3K19Q56UN5 1328 aa21.79■■□□□ 1.08
RETREG1-201ENST00000306320 ZNF500O60304 480 aaPredicted RBP21.79■■□□□ 1.08
RETREG1-201ENST00000306320 GSPT1P15170 499 aaKnown RBP21.79■■□□□ 1.08
RETREG1-201ENST00000306320 MTHFSDQ2M296 383 aaKnown RBP21.79■■□□□ 1.08
RETREG1-201ENST00000306320 TSPYL4Q9UJ04 414 aa21.79■■□□□ 1.08
RETREG1-201ENST00000306320 EDC4Q6P2E9 1401 aaKnown RBP21.78■■□□□ 1.08
RETREG1-201ENST00000306320 LRSAM1Q6UWE0 723 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms