RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 A0A1W2PP64 1363 aa10.54□□□□□ -0.72
TM4SF1-201ENST00000305366 TESK2Q96S53 571 aa10.54□□□□□ -0.72
TM4SF1-201ENST00000305366 CD163L1Q9NR16 1453 aa10.53□□□□□ -0.72
TM4SF1-201ENST00000305366 RRS1Q15050 365 aaKnown RBP10.53□□□□□ -0.72
TM4SF1-201ENST00000305366 ERICH6BQ5W0A0 696 aa10.53□□□□□ -0.72
TM4SF1-201ENST00000305366 GGNBP2Q9H3C7 697 aa10.53□□□□□ -0.72
TM4SF1-201ENST00000305366 PRIM1P49642 420 aaKnown RBP10.52□□□□□ -0.72
TM4SF1-201ENST00000305366 USHBP1Q8N6Y0 703 aa10.52□□□□□ -0.72
TM4SF1-201ENST00000305366 NFAT5O94916 1531 aa10.52□□□□□ -0.73
TM4SF1-201ENST00000305366 EDC4Q6P2E9 1401 aaKnown RBP10.52□□□□□ -0.73
TM4SF1-201ENST00000305366 MAP3K19Q56UN5 1328 aa10.52□□□□□ -0.73
TM4SF1-201ENST00000305366 HOXC9P31274 260 aa10.52□□□□□ -0.73
TM4SF1-201ENST00000305366 PTGER2P43116 358 aa10.52□□□□□ -0.73
TM4SF1-201ENST00000305366 FHDC1Q9C0D6 1143 aaPredicted RBP10.52□□□□□ -0.73
TM4SF1-201ENST00000305366 LRRC4BQ9NT99 713 aa10.52□□□□□ -0.73
TM4SF1-201ENST00000305366 PARP4Q9UKK3 1724 aaKnown RBP10.51□□□□□ -0.73
TM4SF1-201ENST00000305366 LRRC37A3O60309 1634 aa10.51□□□□□ -0.73
TM4SF1-201ENST00000305366 COL18A1P39060 1754 aa10.51□□□□□ -0.73
TM4SF1-201ENST00000305366 ZNF827Q17R98 1081 aa10.51□□□□□ -0.73
TM4SF1-201ENST00000305366 CCDC184Q52MB2 194 aa10.51□□□□□ -0.73
TM4SF1-201ENST00000305366 ZBED9Q6R2W3 1325 aa10.51□□□□□ -0.73
TM4SF1-201ENST00000305366 BCL9O00512 1426 aa10.5□□□□□ -0.73
TM4SF1-201ENST00000305366 TMF1P82094 1093 aa10.5□□□□□ -0.73
TM4SF1-201ENST00000305366 TNS2Q63HR2 1409 aa10.5□□□□□ -0.73
TM4SF1-201ENST00000305366 ZCRB1Q8TBF4 217 aaKnown RBP10.5□□□□□ -0.73
TM4SF1-201ENST00000305366 PUS7Q96PZ0 661 aaKnown RBP10.5□□□□□ -0.73
TM4SF1-201ENST00000305366 SYT17Q9BSW7 474 aa10.5□□□□□ -0.73
TM4SF1-201ENST00000305366 POLR3GLQ9BT43 218 aa10.5□□□□□ -0.73
TM4SF1-201ENST00000305366 MTFR1LQ9H019 292 aa10.5□□□□□ -0.73
TM4SF1-201ENST00000305366 MRS2Q9HD23 443 aa10.5□□□□□ -0.73
TM4SF1-201ENST00000305366 NUP188Q5SRE5 1749 aa10.49□□□□□ -0.73
TM4SF1-201ENST00000305366 FYB1O15117 783 aa10.49□□□□□ -0.73
TM4SF1-201ENST00000305366 PPM1GO15355 546 aaPredicted RBP10.49□□□□□ -0.73
TM4SF1-201ENST00000305366 NBPF6Q5VWK0 638 aa10.49□□□□□ -0.73
TM4SF1-201ENST00000305366 NPM2Q86SE8 214 aaKnown RBP10.49□□□□□ -0.73
TM4SF1-201ENST00000305366 SP7Q8TDD2 431 aaPredicted RBP10.49□□□□□ -0.73
TM4SF1-201ENST00000305366 NBPF4Q96M43 638 aa10.49□□□□□ -0.73
TM4SF1-201ENST00000305366 TFCP2L1Q9NZI6 479 aa10.49□□□□□ -0.73
TM4SF1-201ENST00000305366 PEAK1Q9H792 1746 aa10.49□□□□□ -0.73
TM4SF1-201ENST00000305366 NINLQ9Y2I6 1382 aa10.48□□□□□ -0.73
TM4SF1-201ENST00000305366 RREB1Q92766 1687 aa10.48□□□□□ -0.73
TM4SF1-201ENST00000305366 HSP90AB2PQ58FF8 381 aa10.47□□□□□ -0.73
TM4SF1-201ENST00000305366 RAPGEF4Q8WZA2 1011 aa10.47□□□□□ -0.73
TM4SF1-201ENST00000305366 FBXO3Q9UK99 471 aa10.47□□□□□ -0.73
TM4SF1-201ENST00000305366 GPR162Q16538 588 aa10.46□□□□□ -0.74
TM4SF1-201ENST00000305366 AKAP12Q02952 1782 aa10.45□□□□□ -0.74
TM4SF1-201ENST00000305366 RGPD5Q99666 1765 aa10.45□□□□□ -0.74
TM4SF1-201ENST00000305366 TATP17735 454 aaPredicted RBP10.45□□□□□ -0.74
TM4SF1-201ENST00000305366 SLC27A3Q5K4L6 730 aa10.45□□□□□ -0.74
TM4SF1-201ENST00000305366 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
TM4SF1-201ENST00000305366 CCNL1Q9UK58 526 aaPredicted RBP10.45□□□□□ -0.74
TM4SF1-201ENST00000305366 ANKRD36BQ8N2N9 1353 aa10.45□□□□□ -0.74
TM4SF1-201ENST00000305366 POLD1P28340 1107 aa10.44□□□□□ -0.74
TM4SF1-201ENST00000305366 MPRIPQ6WCQ1 1025 aa10.44□□□□□ -0.74
TM4SF1-201ENST00000305366 FAM9BQ8IZU0 186 aa10.44□□□□□ -0.74
TM4SF1-201ENST00000305366 SGIP1Q9BQI5 828 aa10.44□□□□□ -0.74
TM4SF1-201ENST00000305366 CARD14Q9BXL6 1004 aa10.44□□□□□ -0.74
TM4SF1-201ENST00000305366 TNNT2P45379 298 aaPredicted RBP10.44□□□□□ -0.74
TM4SF1-201ENST00000305366 CDCA8Q53HL2 280 aa10.44□□□□□ -0.74
TM4SF1-201ENST00000305366 MSL1Q68DK7 614 aa10.44□□□□□ -0.74
TM4SF1-201ENST00000305366 EMILIN1Q9Y6C2 1016 aa10.44□□□□□ -0.74
TM4SF1-201ENST00000305366 PNPLA7Q6ZV29 1317 aa10.43□□□□□ -0.74
TM4SF1-201ENST00000305366 ZNF784Q8NCA9 323 aaPredicted RBP10.42□□□□□ -0.74
TM4SF1-201ENST00000305366 ABCC6O95255 1503 aa10.42□□□□□ -0.74
TM4SF1-201ENST00000305366 SMG6Q86US8 1419 aaKnown RBP10.42□□□□□ -0.74
TM4SF1-201ENST00000305366 MON2Q7Z3U7 1717 aa10.42□□□□□ -0.74
TM4SF1-201ENST00000305366 SMIM5Q71RC9 77 aa10.42□□□□□ -0.74
TM4SF1-201ENST00000305366 COL23A1Q86Y22 540 aaPredicted RBP10.42□□□□□ -0.74
TM4SF1-201ENST00000305366 NLGN2Q8NFZ4 835 aa10.41□□□□□ -0.74
TM4SF1-201ENST00000305366 SLC16A10Q8TF71 515 aa10.41□□□□□ -0.74
TM4SF1-201ENST00000305366 PPP4R2Q9NY27 417 aa10.41□□□□□ -0.74
TM4SF1-201ENST00000305366 MEGF6O75095 1541 aa10.41□□□□□ -0.74
TM4SF1-201ENST00000305366 SBF2Q86WG5 1849 aa10.4□□□□□ -0.74
TM4SF1-201ENST00000305366 RALBP1Q15311 655 aa10.4□□□□□ -0.74
TM4SF1-201ENST00000305366 CYP27B1O15528 508 aa10.39□□□□□ -0.75
TM4SF1-201ENST00000305366 NSD2O96028 1365 aa10.39□□□□□ -0.75
TM4SF1-201ENST00000305366 PHF14O94880 888 aa10.39□□□□□ -0.75
TM4SF1-201ENST00000305366 PNISRQ8TF01 805 aaKnown RBP10.39□□□□□ -0.75
TM4SF1-201ENST00000305366 WWC3Q9ULE0 1092 aa10.39□□□□□ -0.75
TM4SF1-201ENST00000305366 NSD3Q9BZ95 1437 aa10.39□□□□□ -0.75
TM4SF1-201ENST00000305366 RTL1A6NKG5 1358 aa10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 INSRP06213 1382 aa10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 CGNL1Q0VF96 1302 aa10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 PCDH11XQ9BZA7 1347 aa10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 PCDH11YQ9BZA8 1340 aa10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 TMEM132AQ24JP5 1023 aa10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 RBM19Q9Y4C8 960 aaKnown RBP10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 MYOM1P52179 1685 aa10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 FLT4P35916 1363 aa10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 CASZ1Q86V15 1759 aa10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 RNF123Q5XPI4 1314 aa10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 MYBBP1AQ9BQG0 1328 aaKnown RBP10.38□□□□□ -0.75
TM4SF1-201ENST00000305366 WNK3Q9BYP7 1800 aa10.37□□□□□ -0.75
TM4SF1-201ENST00000305366 PIGBQ92521 554 aa10.37□□□□□ -0.75
TM4SF1-201ENST00000305366 EYA1Q99502 592 aa10.37□□□□□ -0.75
TM4SF1-201ENST00000305366 NHSQ6T4R5 1651 aa10.37□□□□□ -0.75
TM4SF1-201ENST00000305366 LTN1O94822 1766 aa10.37□□□□□ -0.75
TM4SF1-201ENST00000305366 AK7Q96M32 723 aa10.37□□□□□ -0.75
TM4SF1-201ENST00000305366 SPG7Q9UQ90 795 aa10.37□□□□□ -0.75
TM4SF1-201ENST00000305366 NUDCQ9Y266 331 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms