RNA–Protein interactions for RNA: ENST00000303927.3

CAVIN3-201, Transcript of caveolae associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAVIN3, Length 1,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-201ENST00000303927 HOXC9P31274 260 aa27.44■■□□□ 1.98
CAVIN3-201ENST00000303927 RRS1Q15050 365 aaKnown RBP27.44■■□□□ 1.98
CAVIN3-201ENST00000303927 RGPD2P0DJD1 1756 aa27.43■■□□□ 1.98
CAVIN3-201ENST00000303927 ZEB1P37275 1124 aaPredicted RBP27.41■■□□□ 1.98
CAVIN3-201ENST00000303927 DDX54Q8TDD1 881 aaKnown RBP27.41■■□□□ 1.98
CAVIN3-201ENST00000303927 PTGER2P43116 358 aa27.4■■□□□ 1.98
CAVIN3-201ENST00000303927 ATF5Q9Y2D1 282 aaPredicted RBP27.4■■□□□ 1.98
CAVIN3-201ENST00000303927 SHANK3Q9BYB0 1731 aa27.39■■□□□ 1.98
CAVIN3-201ENST00000303927 FLT4P35916 1363 aa27.39■■□□□ 1.98
CAVIN3-201ENST00000303927 DOT1LQ8TEK3 1739 aa27.38■■□□□ 1.97
CAVIN3-201ENST00000303927 DCAF8L1A6NGE4 600 aa27.37■■□□□ 1.97
CAVIN3-201ENST00000303927 MEGF6O75095 1541 aa27.36■■□□□ 1.97
CAVIN3-201ENST00000303927 SMG6Q86US8 1419 aaKnown RBP27.36■■□□□ 1.97
CAVIN3-201ENST00000303927 MTFR1LQ9H019 292 aa27.36■■□□□ 1.97
CAVIN3-201ENST00000303927 KAT6BQ8WYB5 2073 aa27.36■■□□□ 1.97
CAVIN3-201ENST00000303927 INSRP06213 1382 aa27.35■■□□□ 1.97
CAVIN3-201ENST00000303927 PER1O15534 1290 aaPredicted RBP27.34■■□□□ 1.97
CAVIN3-201ENST00000303927 YY1P25490 414 aa27.34■■□□□ 1.97
CAVIN3-201ENST00000303927 AMER1Q5JTC6 1135 aaPredicted RBP27.34■■□□□ 1.97
CAVIN3-201ENST00000303927 LRRC4BQ9NT99 713 aa27.34■■□□□ 1.97
CAVIN3-201ENST00000303927 EMILIN1Q9Y6C2 1016 aa27.34■■□□□ 1.97
CAVIN3-201ENST00000303927 ZNF827Q17R98 1081 aa27.33■■□□□ 1.97
CAVIN3-201ENST00000303927 MORC1Q86VD1 984 aa27.33■■□□□ 1.97
CAVIN3-201ENST00000303927 ZCRB1Q8TBF4 217 aaKnown RBP27.31■■□□□ 1.96
CAVIN3-201ENST00000303927 SYTL4Q96C24 671 aaPredicted RBP27.31■■□□□ 1.96
CAVIN3-201ENST00000303927 TNNT2P45379 298 aaPredicted RBP27.3■■□□□ 1.96
CAVIN3-201ENST00000303927 HSP90AB2PQ58FF8 381 aa27.3■■□□□ 1.96
CAVIN3-201ENST00000303927 SLC27A3Q5K4L6 730 aa27.3■■□□□ 1.96
CAVIN3-201ENST00000303927 SGIP1Q9BQI5 828 aa27.3■■□□□ 1.96
CAVIN3-201ENST00000303927 POLKQ9UBT6 870 aa27.3■■□□□ 1.96
CAVIN3-201ENST00000303927 QSER1Q2KHR3 1735 aa27.3■■□□□ 1.96
CAVIN3-201ENST00000303927 PPM1GO15355 546 aaPredicted RBP27.29■■□□□ 1.96
CAVIN3-201ENST00000303927 PRIM1P49642 420 aaKnown RBP27.29■■□□□ 1.96
CAVIN3-201ENST00000303927 NBPF6Q5VWK0 638 aa27.29■■□□□ 1.96
CAVIN3-201ENST00000303927 USHBP1Q8N6Y0 703 aa27.29■■□□□ 1.96
CAVIN3-201ENST00000303927 NBPF4Q96M43 638 aa27.29■■□□□ 1.96
CAVIN3-201ENST00000303927 LY75O60449 1722 aa27.28■■□□□ 1.96
CAVIN3-201ENST00000303927 NPC1L1Q9UHC9 1359 aa27.28■■□□□ 1.96
CAVIN3-201ENST00000303927 AKT1S1Q96B36 256 aa27.27■■□□□ 1.96
CAVIN3-201ENST00000303927 FHDC1Q9C0D6 1143 aaPredicted RBP27.27■■□□□ 1.96
CAVIN3-201ENST00000303927 UTRNP46939 3433 aa27.25■■□□□ 1.95
CAVIN3-201ENST00000303927 TUBGCP6Q96RT7 1819 aa27.25■■□□□ 1.95
CAVIN3-201ENST00000303927 RAPGEF4Q8WZA2 1011 aa27.24■■□□□ 1.95
CAVIN3-201ENST00000303927 SYT17Q9BSW7 474 aa27.24■■□□□ 1.95
CAVIN3-201ENST00000303927 ARXQ96QS3 562 aa27.23■■□□□ 1.95
CAVIN3-201ENST00000303927 KCNQ4P56696 695 aa27.22■■□□□ 1.95
CAVIN3-201ENST00000303927 TATP17735 454 aaPredicted RBP27.21■■□□□ 1.95
CAVIN3-201ENST00000303927 CC2D1BQ5T0F9 858 aaKnown RBP27.21■■□□□ 1.95
CAVIN3-201ENST00000303927 PNPLA7Q6ZV29 1317 aa27.19■■□□□ 1.94
CAVIN3-201ENST00000303927 TFCP2L1Q9NZI6 479 aa27.19■■□□□ 1.94
CAVIN3-201ENST00000303927 MAP3K5Q99683 1374 aa27.18■■□□□ 1.94
CAVIN3-201ENST00000303927 COL24A1Q17RW2 1714 aa27.18■■□□□ 1.94
CAVIN3-201ENST00000303927 PCDH11XQ9BZA7 1347 aa27.17■■□□□ 1.94
CAVIN3-201ENST00000303927 PCDH11YQ9BZA8 1340 aa27.17■■□□□ 1.94
CAVIN3-201ENST00000303927 SLC16A10Q8TF71 515 aa27.17■■□□□ 1.94
CAVIN3-201ENST00000303927 CCNL1Q9UK58 526 aaPredicted RBP27.17■■□□□ 1.94
CAVIN3-201ENST00000303927 NCAPD2Q15021 1401 aa27.16■■□□□ 1.94
CAVIN3-201ENST00000303927 PKD1L3Q7Z443 1732 aa27.15■■□□□ 1.94
CAVIN3-201ENST00000303927 EIF4A2Q14240 407 aaKnown RBP27.14■■□□□ 1.94
CAVIN3-201ENST00000303927 C5P01031 1676 aa27.14■■□□□ 1.93
CAVIN3-201ENST00000303927 TOGARAM1Q9Y4F4 1720 aa27.13■■□□□ 1.93
CAVIN3-201ENST00000303927 POLD1P28340 1107 aa27.12■■□□□ 1.93
CAVIN3-201ENST00000303927 EYA1Q99502 592 aa27.12■■□□□ 1.93
CAVIN3-201ENST00000303927 CYP27B1O15528 508 aa27.09■■□□□ 1.93
CAVIN3-201ENST00000303927 MTHFSP49914 203 aa27.09■■□□□ 1.93
CAVIN3-201ENST00000303927 CNGB1Q14028 1251 aaPredicted RBP27.09■■□□□ 1.93
CAVIN3-201ENST00000303927 KLHL34Q8N239 644 aa27.08■■□□□ 1.93
CAVIN3-201ENST00000303927 ITGB4P16144 1822 aa27.08■■□□□ 1.93
CAVIN3-201ENST00000303927 PALLDQ8WX93 1383 aa27.08■■□□□ 1.93
CAVIN3-201ENST00000303927 MPRIPQ6WCQ1 1025 aa27.07■■□□□ 1.92
CAVIN3-201ENST00000303927 IGSF1Q8N6C5 1336 aa27.07■■□□□ 1.92
CAVIN3-201ENST00000303927 TAF1LQ8IZX4 1826 aa27.05■■□□□ 1.92
CAVIN3-201ENST00000303927 MSH5O43196 834 aa27.05■■□□□ 1.92
CAVIN3-201ENST00000303927 PLEKHG2Q9H7P9 1386 aa27.05■■□□□ 1.92
CAVIN3-201ENST00000303927 CHD4Q14839 1912 aa27.04■■□□□ 1.92
CAVIN3-201ENST00000303927 COL23A1Q86Y22 540 aaPredicted RBP27.03■■□□□ 1.92
CAVIN3-201ENST00000303927 IL13P35225 146 aa27.02■■□□□ 1.92
CAVIN3-201ENST00000303927 SPG7Q9UQ90 795 aa27.02■■□□□ 1.92
CAVIN3-201ENST00000303927 GOLGB1Q14789 3259 aaKnown RBP27.01■■□□□ 1.92
CAVIN3-201ENST00000303927 GPR162Q16538 588 aa27.01■■□□□ 1.91
CAVIN3-201ENST00000303927 ZNF784Q8NCA9 323 aaPredicted RBP27.01■■□□□ 1.91
CAVIN3-201ENST00000303927 C4BP0C0L5 1744 aa27■■□□□ 1.91
CAVIN3-201ENST00000303927 DDX10Q13206 875 aaKnown RBP27■■□□□ 1.91
CAVIN3-201ENST00000303927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27■■□□□ 1.91
CAVIN3-201ENST00000303927 HMGB2P26583 209 aaKnown RBP26.99■■□□□ 1.91
CAVIN3-201ENST00000303927 NKX1-1Q15270 411 aaPredicted RBP26.99■■□□□ 1.91
CAVIN3-201ENST00000303927 SMARCC1Q92922 1105 aaPredicted RBP26.99■■□□□ 1.91
CAVIN3-201ENST00000303927 DIAPH1O60610 1272 aaKnown RBP26.98■■□□□ 1.91
CAVIN3-201ENST00000303927 NLGN2Q8NFZ4 835 aa26.98■■□□□ 1.91
CAVIN3-201ENST00000303927 MSL1Q68DK7 614 aa26.97■■□□□ 1.91
CAVIN3-201ENST00000303927 PIGBQ92521 554 aa26.97■■□□□ 1.91
CAVIN3-201ENST00000303927 KDRP35968 1356 aa26.97■■□□□ 1.91
CAVIN3-201ENST00000303927 COL3A1P02461 1466 aaPredicted RBP26.96■■□□□ 1.91
CAVIN3-201ENST00000303927 PELP1Q8IZL8 1130 aaKnown RBP26.96■■□□□ 1.91
CAVIN3-201ENST00000303927 PPP2R1AP30153 589 aa26.95■■□□□ 1.9
CAVIN3-201ENST00000303927 FLAD1Q8NFF5 587 aa26.95■■□□□ 1.9
CAVIN3-201ENST00000303927 CFAP53Q96M91 514 aa26.95■■□□□ 1.9
CAVIN3-201ENST00000303927 SULT6B1Q6IMI4 303 aa26.94■■□□□ 1.9
CAVIN3-201ENST00000303927 AK7Q96M32 723 aa26.93■■□□□ 1.9
CAVIN3-201ENST00000303927 UBR3Q6ZT12 1888 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms