RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 LRRC59Q96AG4 307 aaKnown RBP18.53■□□□□ 0.56
SHCBP1-201ENST00000303383 SLAIN2Q9P270 581 aa18.53■□□□□ 0.56
SHCBP1-201ENST00000303383 TNNQ9UQP3 1299 aa18.53■□□□□ 0.56
SHCBP1-201ENST00000303383 TSPYL6Q8N831 410 aa18.53■□□□□ 0.56
SHCBP1-201ENST00000303383 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
SHCBP1-201ENST00000303383 VAMP4O75379 141 aa18.52■□□□□ 0.56
SHCBP1-201ENST00000303383 ITPRIPQ8IWB1 547 aa18.52■□□□□ 0.56
SHCBP1-201ENST00000303383 RLBP1P12271 317 aa18.52■□□□□ 0.55
SHCBP1-201ENST00000303383 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
SHCBP1-201ENST00000303383 AAMPQ13685 434 aa18.51■□□□□ 0.55
SHCBP1-201ENST00000303383 BRINP3Q76B58 766 aa18.51■□□□□ 0.55
SHCBP1-201ENST00000303383 HTATSF1O43719 755 aaKnown RBP18.51■□□□□ 0.55
SHCBP1-201ENST00000303383 C8orf58Q8NAV2 365 aa18.51■□□□□ 0.55
SHCBP1-201ENST00000303383 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
SHCBP1-201ENST00000303383 SLIT3O75094 1523 aa18.5■□□□□ 0.55
SHCBP1-201ENST00000303383 TRPM3Q9HCF6 1732 aaPredicted RBP18.5■□□□□ 0.55
SHCBP1-201ENST00000303383 CSB-PGBD3P0DP91 1061 aa18.5■□□□□ 0.55
SHCBP1-201ENST00000303383 TRIM27P14373 513 aa18.5■□□□□ 0.55
SHCBP1-201ENST00000303383 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
SHCBP1-201ENST00000303383 CHL1O00533 1208 aa18.5■□□□□ 0.55
SHCBP1-201ENST00000303383 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
SHCBP1-201ENST00000303383 PLEKHO1Q53GL0 409 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-201ENST00000303383 MIS18AQ9NYP9 233 aa18.49■□□□□ 0.55
SHCBP1-201ENST00000303383 MAP3K5Q99683 1374 aa18.49■□□□□ 0.55
SHCBP1-201ENST00000303383 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
SHCBP1-201ENST00000303383 NLRP2Q9NX02 1062 aa18.48■□□□□ 0.55
SHCBP1-201ENST00000303383 RBM19Q9Y4C8 960 aaKnown RBP18.48■□□□□ 0.55
SHCBP1-201ENST00000303383 SPATA31A3Q5VYP0 1347 aa18.48■□□□□ 0.55
SHCBP1-201ENST00000303383 C1orf141Q5JVX7 400 aa18.47■□□□□ 0.55
SHCBP1-201ENST00000303383 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
SHCBP1-201ENST00000303383 AXIN2Q9Y2T1 843 aa18.46■□□□□ 0.55
SHCBP1-201ENST00000303383 MRPL50Q8N5N7 158 aaKnown RBP18.46■□□□□ 0.54
SHCBP1-201ENST00000303383 AMOTQ4VCS5 1084 aa18.45■□□□□ 0.54
SHCBP1-201ENST00000303383 CHRNA2Q15822 529 aa18.44■□□□□ 0.54
SHCBP1-201ENST00000303383 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
SHCBP1-201ENST00000303383 RAPGEF4Q8WZA2 1011 aa18.44■□□□□ 0.54
SHCBP1-201ENST00000303383 ALS2Q96Q42 1657 aa18.44■□□□□ 0.54
SHCBP1-201ENST00000303383 TMEM57Q8N5G2 664 aa18.44■□□□□ 0.54
SHCBP1-201ENST00000303383 CRB1P82279 1406 aa18.44■□□□□ 0.54
SHCBP1-201ENST00000303383 KDM2BQ8NHM5 1336 aa18.44■□□□□ 0.54
SHCBP1-201ENST00000303383 XIRP1Q702N8 1843 aaKnown RBP18.44■□□□□ 0.54
SHCBP1-201ENST00000303383 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
SHCBP1-201ENST00000303383 ERBB3P21860 1342 aa18.43■□□□□ 0.54
SHCBP1-201ENST00000303383 BRPF1P55201 1214 aaPredicted RBP18.43■□□□□ 0.54
SHCBP1-201ENST00000303383 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
SHCBP1-201ENST00000303383 API5Q9BZZ5 524 aaKnown RBP18.43■□□□□ 0.54
SHCBP1-201ENST00000303383 KIAA0232Q92628 1395 aa18.43■□□□□ 0.54
SHCBP1-201ENST00000303383 TEFQ10587 303 aa18.43■□□□□ 0.54
SHCBP1-201ENST00000303383 ARHGAP45Q92619 1136 aa18.42■□□□□ 0.54
SHCBP1-201ENST00000303383 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
SHCBP1-201ENST00000303383 IL17REQ8NFR9 667 aa18.42■□□□□ 0.54
SHCBP1-201ENST00000303383 PHRF1Q9P1Y6 1649 aaKnown RBP18.42■□□□□ 0.54
SHCBP1-201ENST00000303383 PXDNQ92626 1479 aa18.42■□□□□ 0.54
SHCBP1-201ENST00000303383 PRDM11Q9NQV5 511 aa18.42■□□□□ 0.54
SHCBP1-201ENST00000303383 MED1Q15648 1581 aaPredicted RBP18.41■□□□□ 0.54
SHCBP1-201ENST00000303383 AKAP4Q5JQC9 854 aa18.41■□□□□ 0.54
SHCBP1-201ENST00000303383 STK31Q9BXU1 1019 aa18.4■□□□□ 0.54
SHCBP1-201ENST00000303383 RGS3P49796 1198 aa18.4■□□□□ 0.54
SHCBP1-201ENST00000303383 IGHDP01880 384 aa18.39■□□□□ 0.53
SHCBP1-201ENST00000303383 TATP17735 454 aaPredicted RBP18.39■□□□□ 0.53
SHCBP1-201ENST00000303383 MPRIPQ6WCQ1 1025 aa18.39■□□□□ 0.53
SHCBP1-201ENST00000303383 RGPD2P0DJD1 1756 aa18.38■□□□□ 0.53
SHCBP1-201ENST00000303383 PCDHB15Q9Y5E8 787 aa18.38■□□□□ 0.53
SHCBP1-201ENST00000303383 SOS2Q07890 1332 aaPredicted RBP18.38■□□□□ 0.53
SHCBP1-201ENST00000303383 SKAP1Q86WV1 359 aa18.38■□□□□ 0.53
SHCBP1-201ENST00000303383 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
SHCBP1-201ENST00000303383 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
SHCBP1-201ENST00000303383 LGR6Q9HBX8 967 aa18.36■□□□□ 0.53
SHCBP1-201ENST00000303383 CCDC30Q5VVM6 783 aa18.35■□□□□ 0.53
SHCBP1-201ENST00000303383 SPG7Q9UQ90 795 aa18.35■□□□□ 0.53
SHCBP1-201ENST00000303383 NECTIN2Q92692 538 aa18.35■□□□□ 0.53
SHCBP1-201ENST00000303383 RGPD5Q99666 1765 aa18.35■□□□□ 0.53
SHCBP1-201ENST00000303383 BTBD11A6QL63 1104 aa18.34■□□□□ 0.53
SHCBP1-201ENST00000303383 CPDO75976 1380 aa18.33■□□□□ 0.53
SHCBP1-201ENST00000303383 TOM1L2Q6ZVM7 507 aa18.33■□□□□ 0.52
SHCBP1-201ENST00000303383 PTPRCP08575 1304 aa18.33■□□□□ 0.52
SHCBP1-201ENST00000303383 RNMTO43148 476 aaKnown RBP18.33■□□□□ 0.52
SHCBP1-201ENST00000303383 CHMP4AQ9BY43 222 aa18.33■□□□□ 0.52
SHCBP1-201ENST00000303383 EVA1CP58658 441 aa18.32■□□□□ 0.52
SHCBP1-201ENST00000303383 ZBTB40Q9NUA8 1239 aa18.32■□□□□ 0.52
SHCBP1-201ENST00000303383 ABCC4O15439 1325 aa18.32■□□□□ 0.52
SHCBP1-201ENST00000303383 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
SHCBP1-201ENST00000303383 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
SHCBP1-201ENST00000303383 SOS1Q07889 1333 aaPredicted RBP18.31■□□□□ 0.52
SHCBP1-201ENST00000303383 SLC4A10Q6U841 1118 aa18.31■□□□□ 0.52
SHCBP1-201ENST00000303383 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
SHCBP1-201ENST00000303383 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
SHCBP1-201ENST00000303383 PDE4AP27815 886 aa18.3■□□□□ 0.52
SHCBP1-201ENST00000303383 STRN4Q9NRL3 753 aa18.3■□□□□ 0.52
SHCBP1-201ENST00000303383 NCAPD2Q15021 1401 aa18.3■□□□□ 0.52
SHCBP1-201ENST00000303383 FKBP5Q13451 457 aaPredicted RBP18.29■□□□□ 0.52
SHCBP1-201ENST00000303383 LRRC37A3O60309 1634 aa18.28■□□□□ 0.52
SHCBP1-201ENST00000303383 ZBTB7BO15156 539 aaPredicted RBP18.28■□□□□ 0.52
SHCBP1-201ENST00000303383 IFNL2Q8IZJ0 200 aa18.28■□□□□ 0.52
SHCBP1-201ENST00000303383 C1orf115Q9H7X2 142 aa18.28■□□□□ 0.52
SHCBP1-201ENST00000303383 HDAC1Q13547 482 aaPredicted RBP18.27■□□□□ 0.52
SHCBP1-201ENST00000303383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.27■□□□□ 0.52
SHCBP1-201ENST00000303383 PDZRN3Q9UPQ7 1066 aa18.27■□□□□ 0.52
SHCBP1-201ENST00000303383 ABCC6O95255 1503 aa18.26■□□□□ 0.51
SHCBP1-201ENST00000303383 WDR17Q8IZU2 1322 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms