RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 PRPF4BQ13523 1007 aaKnown RBP16.64■□□□□ 0.26
HIPK3-201ENST00000303296 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.26
HIPK3-201ENST00000303296 PRDM10Q9NQV6 1147 aa16.64■□□□□ 0.26
HIPK3-201ENST00000303296 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
HIPK3-201ENST00000303296 TTC36A6NLP5 189 aa16.64■□□□□ 0.25
HIPK3-201ENST00000303296 MYL6BP14649 208 aa16.64■□□□□ 0.25
HIPK3-201ENST00000303296 CASQ1P31415 396 aa16.64■□□□□ 0.25
HIPK3-201ENST00000303296 SPTY2D1Q68D10 685 aaPredicted RBP16.64■□□□□ 0.25
HIPK3-201ENST00000303296 DDX54Q8TDD1 881 aaKnown RBP16.64■□□□□ 0.25
HIPK3-201ENST00000303296 POLR3GO15318 223 aaPredicted RBP16.63■□□□□ 0.25
HIPK3-201ENST00000303296 EFCAB2Q5VUJ9 269 aa16.63■□□□□ 0.25
HIPK3-201ENST00000303296 PAIP2Q9BPZ3 127 aaKnown RBP16.63■□□□□ 0.25
HIPK3-201ENST00000303296 UBAC1Q9BSL1 405 aa16.63■□□□□ 0.25
HIPK3-201ENST00000303296 PANK1Q8TE04 598 aa16.63■□□□□ 0.25
HIPK3-201ENST00000303296 CFAP100Q494V2 611 aa16.63■□□□□ 0.25
HIPK3-201ENST00000303296 NAP1L3Q99457 506 aaPredicted RBP16.63■□□□□ 0.25
HIPK3-201ENST00000303296 MXRA7P84157 204 aa16.62■□□□□ 0.25
HIPK3-201ENST00000303296 HIP1O00291 1037 aa16.62■□□□□ 0.25
HIPK3-201ENST00000303296 HLTFQ14527 1009 aaKnown RBP eCLIP16.62■□□□□ 0.25
HIPK3-201ENST00000303296 TERF1P54274 439 aa16.61■□□□□ 0.25
HIPK3-201ENST00000303296 ATP2C2O75185 946 aa16.61■□□□□ 0.25
HIPK3-201ENST00000303296 FSD2A1L4K1 749 aa16.61■□□□□ 0.25
HIPK3-201ENST00000303296 SEC63Q9UGP8 760 aaKnown RBP16.61■□□□□ 0.25
HIPK3-201ENST00000303296 ECM2O94769 699 aaPredicted RBP16.6■□□□□ 0.25
HIPK3-201ENST00000303296 MBD3O95983 291 aa16.6■□□□□ 0.25
HIPK3-201ENST00000303296 CYP46A1Q9Y6A2 500 aa16.6■□□□□ 0.25
HIPK3-201ENST00000303296 TPD52P55327 224 aaPredicted RBP16.6■□□□□ 0.25
HIPK3-201ENST00000303296 IMMTQ16891 758 aaKnown RBP16.6■□□□□ 0.25
HIPK3-201ENST00000303296 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
HIPK3-201ENST00000303296 LRP2BPQ9P2M1 347 aa16.6■□□□□ 0.25
HIPK3-201ENST00000303296 UPF3BQ9BZI7 483 aaKnown RBP16.6■□□□□ 0.25
HIPK3-201ENST00000303296 LARP1BQ659C4 914 aaKnown RBP16.59■□□□□ 0.25
HIPK3-201ENST00000303296 CRACR2BQ8N4Y2 399 aaPredicted RBP16.59■□□□□ 0.25
HIPK3-201ENST00000303296 VTI1AQ96AJ9 217 aa16.59■□□□□ 0.25
HIPK3-201ENST00000303296 CCDC85AQ96PX6 553 aaPredicted RBP16.59■□□□□ 0.25
HIPK3-201ENST00000303296 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
HIPK3-201ENST00000303296 TMOD2Q9NZR1 351 aa16.59■□□□□ 0.25
HIPK3-201ENST00000303296 C6orf163Q5TEZ5 329 aa16.59■□□□□ 0.25
HIPK3-201ENST00000303296 TSG101Q99816 390 aa16.59■□□□□ 0.25
HIPK3-201ENST00000303296 UBXN4Q92575 508 aa16.59■□□□□ 0.25
HIPK3-201ENST00000303296 MMRN2Q9H8L6 949 aa16.59■□□□□ 0.25
HIPK3-201ENST00000303296 ST20-MTHFSA0A0A6YYL1 179 aa16.59■□□□□ 0.25
HIPK3-201ENST00000303296 PIP4K2BP78356 416 aa16.59■□□□□ 0.25
HIPK3-201ENST00000303296 NDC80O14777 642 aa16.58■□□□□ 0.25
HIPK3-201ENST00000303296 FAM107BQ9H098 131 aa16.58■□□□□ 0.25
HIPK3-201ENST00000303296 EEA1Q15075 1411 aa16.58■□□□□ 0.25
HIPK3-201ENST00000303296 CAMK4Q16566 473 aa16.58■□□□□ 0.25
HIPK3-201ENST00000303296 FBF1Q8TES7 1133 aa16.58■□□□□ 0.24
HIPK3-201ENST00000303296 A0A1W2PRG0 241 aa16.58■□□□□ 0.24
HIPK3-201ENST00000303296 TDRD12Q587J7 1177 aaKnown RBP16.58■□□□□ 0.24
HIPK3-201ENST00000303296 MAP9Q49MG5 647 aa16.58■□□□□ 0.24
HIPK3-201ENST00000303296 ANKRD30AQ9BXX3 1397 aa16.57■□□□□ 0.24
HIPK3-201ENST00000303296 CCDC30Q5VVM6 783 aa16.57■□□□□ 0.24
HIPK3-201ENST00000303296 SPATA32Q96LK8 384 aa16.57■□□□□ 0.24
HIPK3-201ENST00000303296 IKBKGQ9Y6K9 419 aa16.57■□□□□ 0.24
HIPK3-201ENST00000303296 CLGNO14967 610 aa16.57■□□□□ 0.24
HIPK3-201ENST00000303296 ABCF2Q9UG63 623 aa16.57■□□□□ 0.24
HIPK3-201ENST00000303296 FKBP15Q5T1M5 1219 aa16.57■□□□□ 0.24
HIPK3-201ENST00000303296 GNAI1P63096 354 aa16.56■□□□□ 0.24
HIPK3-201ENST00000303296 KRT85P78386 507 aa16.56■□□□□ 0.24
HIPK3-201ENST00000303296 ODF2LQ9ULJ1 636 aa16.56■□□□□ 0.24
HIPK3-201ENST00000303296 SLU7O95391 586 aaKnown RBP16.56■□□□□ 0.24
HIPK3-201ENST00000303296 VPS36Q86VN1 386 aa16.56■□□□□ 0.24
HIPK3-201ENST00000303296 POLR3DP05423 398 aaPredicted RBP16.56■□□□□ 0.24
HIPK3-201ENST00000303296 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
HIPK3-201ENST00000303296 CABP4P57796 275 aa16.56■□□□□ 0.24
HIPK3-201ENST00000303296 BBXQ8WY36 941 aaPredicted RBP16.56■□□□□ 0.24
HIPK3-201ENST00000303296 TAOK3Q9H2K8 898 aa16.56■□□□□ 0.24
HIPK3-201ENST00000303296 SATB1Q01826 763 aa16.55■□□□□ 0.24
HIPK3-201ENST00000303296 NOP2P46087 812 aaKnown RBP16.55■□□□□ 0.24
HIPK3-201ENST00000303296 KIF4BQ2VIQ3 1234 aa16.55■□□□□ 0.24
HIPK3-201ENST00000303296 ABTB2Q8N961 1025 aa16.55■□□□□ 0.24
HIPK3-201ENST00000303296 CCDC6Q16204 474 aa16.55■□□□□ 0.24
HIPK3-201ENST00000303296 BRPF3Q9ULD4 1205 aa16.55■□□□□ 0.24
HIPK3-201ENST00000303296 FERMT1Q9BQL6 677 aa16.55■□□□□ 0.24
HIPK3-201ENST00000303296 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
HIPK3-201ENST00000303296 MINDY4BA8MYZ0 360 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 KIF5CO60282 957 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 ANKRD1Q15327 319 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 MAATS1Q7Z4T9 603 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 L3MBTL2Q969R5 705 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 SMTNL1A8MU46 457 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 MAP7D1Q3KQU3 841 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 MICALCLQ6ZW33 695 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 PRC1O43663 620 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 CCDC63Q8NA47 563 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 CPLX3Q8WVH0 158 aa16.54■□□□□ 0.24
HIPK3-201ENST00000303296 CDKL5O76039 1030 aa16.53■□□□□ 0.24
HIPK3-201ENST00000303296 URI1O94763 535 aaPredicted RBP16.53■□□□□ 0.24
HIPK3-201ENST00000303296 KIF20AO95235 890 aa16.53■□□□□ 0.24
HIPK3-201ENST00000303296 NUP88Q99567 741 aaPredicted RBP16.53■□□□□ 0.24
HIPK3-201ENST00000303296 RUNDC1Q96C34 613 aa16.53■□□□□ 0.24
HIPK3-201ENST00000303296 PPP1R9BQ96SB3 815 aa16.53■□□□□ 0.24
HIPK3-201ENST00000303296 MKNK2Q9HBH9 465 aa16.53■□□□□ 0.24
HIPK3-201ENST00000303296 IDH1O75874 414 aaKnown RBP16.53■□□□□ 0.24
HIPK3-201ENST00000303296 SYNCQ9H7C4 482 aa16.53■□□□□ 0.24
HIPK3-201ENST00000303296 SREK1Q8WXA9 508 aaKnown RBP16.52■□□□□ 0.24
HIPK3-201ENST00000303296 SAMM50Q9Y512 469 aa16.52■□□□□ 0.24
HIPK3-201ENST00000303296 CCDC82Q8N4S0 544 aa16.52■□□□□ 0.24
HIPK3-201ENST00000303296 FLIIQ13045 1269 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms