RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 LRRC37A3O60309 1634 aa13.57□□□□□ -0.24
CLP1-201ENST00000302731 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
CLP1-201ENST00000302731 TWISTNBQ3B726 338 aaPredicted RBP13.57□□□□□ -0.24
CLP1-201ENST00000302731 BABAM1Q9NWV8 329 aa13.57□□□□□ -0.24
CLP1-201ENST00000302731 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
CLP1-201ENST00000302731 TCERG1O14776 1098 aaKnown RBP13.57□□□□□ -0.24
CLP1-201ENST00000302731 RLBP1P12271 317 aa13.57□□□□□ -0.24
CLP1-201ENST00000302731 TRIM27P14373 513 aa13.57□□□□□ -0.24
CLP1-201ENST00000302731 LMOD2Q6P5Q4 547 aa13.57□□□□□ -0.24
CLP1-201ENST00000302731 MCM10Q7L590 875 aa13.57□□□□□ -0.24
CLP1-201ENST00000302731 FTSJ3Q8IY81 847 aaKnown RBP13.57□□□□□ -0.24
CLP1-201ENST00000302731 SPATA31A3Q5VYP0 1347 aa13.56□□□□□ -0.24
CLP1-201ENST00000302731 ZNF335Q9H4Z2 1342 aaPredicted RBP13.56□□□□□ -0.24
CLP1-201ENST00000302731 NBPF6Q5VWK0 638 aa13.56□□□□□ -0.24
CLP1-201ENST00000302731 LTV1Q96GA3 475 aaPredicted RBP13.56□□□□□ -0.24
CLP1-201ENST00000302731 NBPF4Q96M43 638 aa13.56□□□□□ -0.24
CLP1-201ENST00000302731 NOB1Q9ULX3 412 aaKnown RBP13.56□□□□□ -0.24
CLP1-201ENST00000302731 MAP3K5Q99683 1374 aa13.55□□□□□ -0.24
CLP1-201ENST00000302731 BRINP3Q76B58 766 aa13.55□□□□□ -0.24
CLP1-201ENST00000302731 MRPL50Q8N5N7 158 aaKnown RBP13.55□□□□□ -0.24
CLP1-201ENST00000302731 TSPYL6Q8N831 410 aa13.55□□□□□ -0.24
CLP1-201ENST00000302731 PLEKHG2Q9H7P9 1386 aa13.55□□□□□ -0.24
CLP1-201ENST00000302731 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
CLP1-201ENST00000302731 DDX19BQ9UMR2 479 aa13.54□□□□□ -0.24
CLP1-201ENST00000302731 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
CLP1-201ENST00000302731 SOS1Q07889 1333 aaPredicted RBP13.54□□□□□ -0.24
CLP1-201ENST00000302731 CRYBG1Q9Y4K1 1723 aa13.54□□□□□ -0.24
CLP1-201ENST00000302731 AMOTQ4VCS5 1084 aa13.53□□□□□ -0.24
CLP1-201ENST00000302731 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
CLP1-201ENST00000302731 SLAIN2Q9P270 581 aa13.53□□□□□ -0.24
CLP1-201ENST00000302731 CPDO75976 1380 aa13.53□□□□□ -0.24
CLP1-201ENST00000302731 SOS2Q07890 1332 aaPredicted RBP13.53□□□□□ -0.24
CLP1-201ENST00000302731 LMO7Q8WWI1 1683 aa13.53□□□□□ -0.24
CLP1-201ENST00000302731 CHMP4BQ9H444 224 aaKnown RBP13.53□□□□□ -0.24
CLP1-201ENST00000302731 TNNQ9UQP3 1299 aa13.53□□□□□ -0.24
CLP1-201ENST00000302731 ERBB3P21860 1342 aa13.52□□□□□ -0.24
CLP1-201ENST00000302731 COL18A1P39060 1754 aa13.52□□□□□ -0.25
CLP1-201ENST00000302731 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
CLP1-201ENST00000302731 DDX17Q92841 729 aaKnown RBP13.51□□□□□ -0.25
CLP1-201ENST00000302731 CEMIPQ8WUJ3 1361 aa13.51□□□□□ -0.25
CLP1-201ENST00000302731 RGPD2P0DJD1 1756 aa13.51□□□□□ -0.25
CLP1-201ENST00000302731 OVOS2A0A0G2JMS6 1433 aa13.51□□□□□ -0.25
CLP1-201ENST00000302731 FAM208AQ9UK61 1670 aaKnown RBP13.5□□□□□ -0.25
CLP1-201ENST00000302731 ZBTB7CA1YPR0 619 aa13.5□□□□□ -0.25
CLP1-201ENST00000302731 USHBP1Q8N6Y0 703 aa13.5□□□□□ -0.25
CLP1-201ENST00000302731 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
CLP1-201ENST00000302731 API5Q9BZZ5 524 aaKnown RBP13.5□□□□□ -0.25
CLP1-201ENST00000302731 TSPYL4Q9UJ04 414 aa13.5□□□□□ -0.25
CLP1-201ENST00000302731 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
CLP1-201ENST00000302731 ELL2O00472 640 aaPredicted RBP13.5□□□□□ -0.25
CLP1-201ENST00000302731 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
CLP1-201ENST00000302731 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
CLP1-201ENST00000302731 ABCC4O15439 1325 aa13.49□□□□□ -0.25
CLP1-201ENST00000302731 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
CLP1-201ENST00000302731 ITPRIPQ8IWB1 547 aa13.49□□□□□ -0.25
CLP1-201ENST00000302731 TMEM57Q8N5G2 664 aa13.49□□□□□ -0.25
CLP1-201ENST00000302731 LRRC59Q96AG4 307 aaKnown RBP13.49□□□□□ -0.25
CLP1-201ENST00000302731 IGHDP01880 384 aa13.48□□□□□ -0.25
CLP1-201ENST00000302731 RWDD1Q9H446 243 aaPredicted RBP13.48□□□□□ -0.25
CLP1-201ENST00000302731 PCDHB15Q9Y5E8 787 aa13.48□□□□□ -0.25
CLP1-201ENST00000302731 RGPD5Q99666 1765 aa13.48□□□□□ -0.25
CLP1-201ENST00000302731 ZBTB40Q9NUA8 1239 aa13.47□□□□□ -0.25
CLP1-201ENST00000302731 NHSL1Q5SYE7 1610 aa13.47□□□□□ -0.25
CLP1-201ENST00000302731 PTPRCP08575 1304 aa13.47□□□□□ -0.25
CLP1-201ENST00000302731 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.25
CLP1-201ENST00000302731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLP1-201ENST00000302731 ZNF530Q6P9A1 599 aaPredicted RBP13.46□□□□□ -0.26
CLP1-201ENST00000302731 CHMP4AQ9BY43 222 aa13.46□□□□□ -0.26
CLP1-201ENST00000302731 KRT24Q2M2I5 525 aa13.45□□□□□ -0.26
CLP1-201ENST00000302731 C1orf141Q5JVX7 400 aa13.45□□□□□ -0.26
CLP1-201ENST00000302731 ADAMTS7Q9UKP4 1686 aa13.44□□□□□ -0.26
CLP1-201ENST00000302731 MIS18AQ9NYP9 233 aa13.44□□□□□ -0.26
CLP1-201ENST00000302731 ZBTB7BO15156 539 aaPredicted RBP13.43□□□□□ -0.26
CLP1-201ENST00000302731 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
CLP1-201ENST00000302731 HOXB7P09629 217 aa13.43□□□□□ -0.26
CLP1-201ENST00000302731 CCDC30Q5VVM6 783 aa13.43□□□□□ -0.26
CLP1-201ENST00000302731 CABLES1Q8TDN4 633 aa13.43□□□□□ -0.26
CLP1-201ENST00000302731 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
CLP1-201ENST00000302731 KDM3BQ7LBC6 1761 aa13.43□□□□□ -0.26
CLP1-201ENST00000302731 RGS12O14924 1447 aa13.43□□□□□ -0.26
CLP1-201ENST00000302731 CACNA1FO60840 1977 aa13.43□□□□□ -0.26
CLP1-201ENST00000302731 RNMTO43148 476 aaKnown RBP13.42□□□□□ -0.26
CLP1-201ENST00000302731 INTS3Q68E01 1043 aaKnown RBP13.42□□□□□ -0.26
CLP1-201ENST00000302731 TATP17735 454 aaPredicted RBP13.42□□□□□ -0.26
CLP1-201ENST00000302731 TEFQ10587 303 aa13.42□□□□□ -0.26
CLP1-201ENST00000302731 NLRP2Q9NX02 1062 aa13.42□□□□□ -0.26
CLP1-201ENST00000302731 ABCA3Q99758 1704 aa13.41□□□□□ -0.26
CLP1-201ENST00000302731 SLC4A2P04920 1241 aa13.41□□□□□ -0.26
CLP1-201ENST00000302731 PDE4AP27815 886 aa13.41□□□□□ -0.26
CLP1-201ENST00000302731 STK31Q9BXU1 1019 aa13.41□□□□□ -0.26
CLP1-201ENST00000302731 BACH2Q9BYV9 841 aa13.41□□□□□ -0.26
CLP1-201ENST00000302731 LGR6Q9HBX8 967 aa13.41□□□□□ -0.26
CLP1-201ENST00000302731 SPG7Q9UQ90 795 aa13.41□□□□□ -0.26
CLP1-201ENST00000302731 CSB-PGBD3P0DP91 1061 aa13.4□□□□□ -0.26
CLP1-201ENST00000302731 EIF4A1P60842 406 aaKnown RBP13.39□□□□□ -0.27
CLP1-201ENST00000302731 CHRNA2Q15822 529 aa13.39□□□□□ -0.27
CLP1-201ENST00000302731 SMC5Q8IY18 1101 aa13.39□□□□□ -0.27
CLP1-201ENST00000302731 PRDM11Q9NQV5 511 aa13.39□□□□□ -0.27
CLP1-201ENST00000302731 PKD1L3Q7Z443 1732 aa13.39□□□□□ -0.27
CLP1-201ENST00000302731 WDR17Q8IZU2 1322 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms